RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 PANK1Q8TE04 598 aa7.17□□□□□ -1.26
VPS36-202ENST00000462289 FRAT1Q92837 279 aaPredicted RBP7.17□□□□□ -1.26
VPS36-202ENST00000462289 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.17□□□□□ -1.26
VPS36-202ENST00000462289 DDX19BQ9UMR2 479 aa7.17□□□□□ -1.26
VPS36-202ENST00000462289 NOP58Q9Y2X3 529 aaKnown RBP7.17□□□□□ -1.26
VPS36-202ENST00000462289 LRRFIP2Q9Y608 721 aaKnown RBP7.17□□□□□ -1.26
VPS36-202ENST00000462289 ECM29Q5VYK3 1845 aa7.17□□□□□ -1.26
VPS36-202ENST00000462289 PNMA6EA0A0J9YXQ4 647 aa7.16□□□□□ -1.26
VPS36-202ENST00000462289 ANKRD18BA2A2Z9 1011 aa7.16□□□□□ -1.26
VPS36-202ENST00000462289 GNAI2P04899 355 aa7.16□□□□□ -1.26
VPS36-202ENST00000462289 H2AFB1P0C5Y9 115 aa7.16□□□□□ -1.26
VPS36-202ENST00000462289 H2AFB2P0C5Z0 115 aa7.16□□□□□ -1.26
VPS36-202ENST00000462289 IARSP41252 1262 aaKnown RBP7.16□□□□□ -1.26
VPS36-202ENST00000462289 GPSM2P81274 684 aa7.16□□□□□ -1.26
VPS36-202ENST00000462289 ELOAQ14241 798 aaKnown RBP7.16□□□□□ -1.26
VPS36-202ENST00000462289 PERM1Q5SV97 790 aa7.16□□□□□ -1.26
VPS36-202ENST00000462289 C9orf131Q5VYM1 1079 aa7.16□□□□□ -1.26
VPS36-202ENST00000462289 SHISA2Q6UWI4 295 aa7.16□□□□□ -1.26
VPS36-202ENST00000462289 SIRT2Q8IXJ6 389 aa7.16□□□□□ -1.26
VPS36-202ENST00000462289 DMRTC2Q8IXT2 367 aaPredicted RBP7.16□□□□□ -1.26
VPS36-202ENST00000462289 SUPT20HQ8NEM7 779 aa7.16□□□□□ -1.26
VPS36-202ENST00000462289 VTI1AQ96AJ9 217 aa7.16□□□□□ -1.26
VPS36-202ENST00000462289 SSBP4Q9BWG4 385 aaPredicted RBP7.16□□□□□ -1.26
VPS36-202ENST00000462289 LEMD3Q9Y2U8 911 aa7.16□□□□□ -1.26
VPS36-202ENST00000462289 WTIPA6NIX2 430 aaPredicted RBP7.15□□□□□ -1.26
VPS36-202ENST00000462289 EYA2O00167 538 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 PLIN1O60240 522 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 SASH3O75995 380 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 RARAP10276 462 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 CPB1P15086 417 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 NRLP54845 237 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 ATP8B2P98198 1209 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 CHRNDQ07001 517 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 AAMPQ13685 434 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 UBE4AQ14139 1066 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 CCDC57Q2TAC2 916 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 CEP85Q6P2H3 762 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 ARHGAP27Q6ZUM4 889 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 KRT25Q7Z3Z0 450 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 FTSJ3Q8IY81 847 aaKnown RBP7.15□□□□□ -1.26
VPS36-202ENST00000462289 PUS3Q9BZE2 481 aaKnown RBP7.15□□□□□ -1.26
VPS36-202ENST00000462289 ANKRD2Q9GZV1 360 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 NOVA2Q9UNW9 492 aaKnown RBP7.15□□□□□ -1.26
VPS36-202ENST00000462289 ZNF804BA4D1E1 1349 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 MROH5Q6ZUA9 1318 aa7.15□□□□□ -1.26
VPS36-202ENST00000462289 DOCK2Q92608 1830 aa7.15□□□□□ -1.27
VPS36-202ENST00000462289 GLTPD2A6NH11 291 aa7.14□□□□□ -1.27
VPS36-202ENST00000462289 YDJCA8MPS7 323 aa7.14□□□□□ -1.27
VPS36-202ENST00000462289 PDE8BO95263 885 aa7.14□□□□□ -1.27
VPS36-202ENST00000462289 ATP2B4P23634 1241 aa7.14□□□□□ -1.27
VPS36-202ENST00000462289 POLR2AP24928 1970 aaKnown RBP7.14□□□□□ -1.27
VPS36-202ENST00000462289 IGHMBP2P38935 993 aaKnown RBP7.14□□□□□ -1.27
VPS36-202ENST00000462289 OCLNQ16625 522 aa7.14□□□□□ -1.27
VPS36-202ENST00000462289 LRRC24Q50LG9 513 aa7.14□□□□□ -1.27
VPS36-202ENST00000462289 COX20Q5RI15 118 aa7.14□□□□□ -1.27
VPS36-202ENST00000462289 DPP8Q6V1X1 898 aaPredicted RBP7.14□□□□□ -1.27
VPS36-202ENST00000462289 LDHAL6AQ6ZMR3 332 aa7.14□□□□□ -1.27
VPS36-202ENST00000462289 FBXO11Q86XK2 927 aa7.14□□□□□ -1.27
VPS36-202ENST00000462289 RPAP2Q8IXW5 612 aaPredicted RBP7.14□□□□□ -1.27
VPS36-202ENST00000462289 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.14□□□□□ -1.27
VPS36-202ENST00000462289 GMLQ99445 158 aa7.14□□□□□ -1.27
VPS36-202ENST00000462289 ZNF277Q9NRM2 450 aaPredicted RBP7.14□□□□□ -1.27
VPS36-202ENST00000462289 TLR7Q9NYK1 1049 aaKnown RBP7.14□□□□□ -1.27
VPS36-202ENST00000462289 WWC3Q9ULE0 1092 aa7.14□□□□□ -1.27
VPS36-202ENST00000462289 MYO5AQ9Y4I1 1855 aaKnown RBP7.13□□□□□ -1.27
VPS36-202ENST00000462289 ZNF541Q9H0D2 1346 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 HOXD8P13378 290 aaPredicted RBP7.13□□□□□ -1.27
VPS36-202ENST00000462289 IL1R1P14778 569 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 RFX1P22670 979 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 ARID4AP29374 1257 aaPredicted RBP7.13□□□□□ -1.27
VPS36-202ENST00000462289 PLAURQ03405 335 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 PRSS36Q5K4E3 855 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 ELMSAN1Q6PJG2 1045 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 FBXO33Q7Z6M2 555 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 TREML1Q86YW5 311 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 ITPRIPQ8IWB1 547 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 KLHDC4Q8TBB5 520 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 COL26A1Q96A83 441 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 YTHDC1Q96MU7 727 aaKnown RBP7.13□□□□□ -1.27
VPS36-202ENST00000462289 CHMP4BQ9H444 224 aaKnown RBP7.13□□□□□ -1.27
VPS36-202ENST00000462289 GPR108Q9NPR9 543 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 RNF181Q9P0P0 153 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 ZMIZ1Q9ULJ6 1067 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 ZNRF3Q9ULT6 936 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 KCNMB2Q9Y691 235 aa7.13□□□□□ -1.27
VPS36-202ENST00000462289 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.13□□□□□ -1.27
VPS36-202ENST00000462289 COL1A1P02452 1464 aaPredicted RBP7.12□□□□□ -1.27
VPS36-202ENST00000462289 PDS5AQ29RF7 1337 aaKnown RBP7.12□□□□□ -1.27
VPS36-202ENST00000462289 FAM205AQ6ZU69 1335 aa7.12□□□□□ -1.27
VPS36-202ENST00000462289 SRGAP3O43295 1099 aa7.12□□□□□ -1.27
VPS36-202ENST00000462289 UFL1O94874 794 aa7.12□□□□□ -1.27
VPS36-202ENST00000462289 SASH1O94885 1247 aa7.12□□□□□ -1.27
VPS36-202ENST00000462289 VIL1P09327 827 aaKnown RBP7.12□□□□□ -1.27
VPS36-202ENST00000462289 KLRK1P26718 216 aa7.12□□□□□ -1.27
VPS36-202ENST00000462289 SOX18P35713 384 aa7.12□□□□□ -1.27
VPS36-202ENST00000462289 IL15P40933 162 aaPredicted RBP7.12□□□□□ -1.27
VPS36-202ENST00000462289 FKBP1AP62942 108 aaKnown RBP7.12□□□□□ -1.27
VPS36-202ENST00000462289 CXCL9Q07325 125 aa7.12□□□□□ -1.27
VPS36-202ENST00000462289 AOC3Q16853 763 aa7.12□□□□□ -1.27
VPS36-202ENST00000462289 GPC2Q8N158 579 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms