RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 MYADML2A6NDP7 307 aa18.52■□□□□ 0.56
APP-211ENST00000462267 C6orf222P0C671 652 aaPredicted RBP18.52■□□□□ 0.56
APP-211ENST00000462267 MAMDC4Q6UXC1 1216 aa18.52■□□□□ 0.56
APP-211ENST00000462267 SIAH1Q8IUQ4 282 aa18.52■□□□□ 0.56
APP-211ENST00000462267 COG5Q9UP83 839 aa18.52■□□□□ 0.56
APP-211ENST00000462267 PCDHA11Q9Y5I1 949 aa18.52■□□□□ 0.56
APP-211ENST00000462267 SNAI1O95863 264 aaPredicted RBP18.51■□□□□ 0.55
APP-211ENST00000462267 CD4P01730 458 aa18.51■□□□□ 0.55
APP-211ENST00000462267 OTOP2Q7RTS6 562 aa18.51■□□□□ 0.55
APP-211ENST00000462267 ARHGAP45Q92619 1136 aa18.51■□□□□ 0.55
APP-211ENST00000462267 RIOK1Q9BRS2 568 aaKnown RBP18.51■□□□□ 0.55
APP-211ENST00000462267 UPF3AQ9H1J1 476 aaKnown RBP18.51■□□□□ 0.55
APP-211ENST00000462267 MCM9Q9NXL9 1143 aa18.51■□□□□ 0.55
APP-211ENST00000462267 ZHX1Q9UKY1 873 aaPredicted RBP18.51■□□□□ 0.55
APP-211ENST00000462267 REV3LO60673 3130 aa18.51■□□□□ 0.55
APP-211ENST00000462267 VWA5AO00534 786 aa18.5■□□□□ 0.55
APP-211ENST00000462267 GTPBP6O43824 516 aaPredicted RBP18.5■□□□□ 0.55
APP-211ENST00000462267 RABGGTBP53611 331 aa18.5■□□□□ 0.55
APP-211ENST00000462267 GJA9P57773 515 aa18.5■□□□□ 0.55
APP-211ENST00000462267 ICA1Q05084 483 aa18.5■□□□□ 0.55
APP-211ENST00000462267 GNASQ5JWF2 1037 aa18.5■□□□□ 0.55
APP-211ENST00000462267 SWAP70Q9UH65 585 aa18.5■□□□□ 0.55
APP-211ENST00000462267 ZNF214Q9UL59 606 aaPredicted RBP18.5■□□□□ 0.55
APP-211ENST00000462267 MTCH2Q9Y6C9 303 aa18.5■□□□□ 0.55
APP-211ENST00000462267 SLC4A7Q9Y6M7 1214 aa18.5■□□□□ 0.55
APP-211ENST00000462267 TLL1O43897 1013 aa18.49■□□□□ 0.55
APP-211ENST00000462267 OS9Q13438 667 aaPredicted RBP18.49■□□□□ 0.55
APP-211ENST00000462267 ZNF467Q7Z7K2 595 aaPredicted RBP18.49■□□□□ 0.55
APP-211ENST00000462267 CRNKL1Q9BZJ0 848 aaKnown RBP18.49■□□□□ 0.55
APP-211ENST00000462267 HIPK3Q9H422 1215 aa18.49■□□□□ 0.55
APP-211ENST00000462267 DBNLQ9UJU6 430 aaKnown RBP18.49■□□□□ 0.55
APP-211ENST00000462267 PPP1R9AQ9ULJ8 1098 aa18.49■□□□□ 0.55
APP-211ENST00000462267 PRRC2BQ5JSZ5 2229 aaKnown RBP18.49■□□□□ 0.55
APP-211ENST00000462267 IRX5P78411 483 aaPredicted RBP18.48■□□□□ 0.55
APP-211ENST00000462267 EVX2Q03828 476 aa18.48■□□□□ 0.55
APP-211ENST00000462267 ACVR2BQ13705 512 aa18.48■□□□□ 0.55
APP-211ENST00000462267 ALYREFQ86V81 257 aaKnown RBP18.48■□□□□ 0.55
APP-211ENST00000462267 RPUSD2Q8IZ73 545 aaKnown RBP18.48■□□□□ 0.55
APP-211ENST00000462267 DDX11Q96FC9 970 aa18.48■□□□□ 0.55
APP-211ENST00000462267 C11orf16Q9NQ32 467 aa18.48■□□□□ 0.55
APP-211ENST00000462267 FBXO28Q9NVF7 368 aa18.48■□□□□ 0.55
APP-211ENST00000462267 TRANK1O15050 2925 aa18.47■□□□□ 0.55
APP-211ENST00000462267 DNAJC25-GNG10A0A024R161 153 aa18.47■□□□□ 0.55
APP-211ENST00000462267 MAGEB6P1A0A0J9YX57 407 aa18.47■□□□□ 0.55
APP-211ENST00000462267 MYOGP15173 224 aa18.47■□□□□ 0.55
APP-211ENST00000462267 POLA2Q14181 598 aa18.47■□□□□ 0.55
APP-211ENST00000462267 CLEC10AQ8IUN9 316 aa18.47■□□□□ 0.55
APP-211ENST00000462267 REPS2Q8NFH8 660 aa18.47■□□□□ 0.55
APP-211ENST00000462267 ABHD16BQ9H3Z7 469 aa18.47■□□□□ 0.55
APP-211ENST00000462267 PARP14Q460N5 1801 aa18.46■□□□□ 0.55
APP-211ENST00000462267 GBF1Q92538 1859 aa18.46■□□□□ 0.55
APP-211ENST00000462267 ATP2A2P16615 1042 aaKnown RBP18.46■□□□□ 0.55
APP-211ENST00000462267 NKX3-2P78367 333 aa18.46■□□□□ 0.55
APP-211ENST00000462267 CCDC144BQ3MJ40 725 aa18.46■□□□□ 0.55
APP-211ENST00000462267 TRMT2AQ8IZ69 625 aaKnown RBP18.46■□□□□ 0.55
APP-211ENST00000462267 SLC43A3Q8NBI5 491 aa18.46■□□□□ 0.55
APP-211ENST00000462267 CCDC17Q96LX7 622 aa18.46■□□□□ 0.55
APP-211ENST00000462267 TEX13BQ9BXU2 312 aa18.46■□□□□ 0.55
APP-211ENST00000462267 SEZ6LQ9BYH1 1024 aa18.46■□□□□ 0.55
APP-211ENST00000462267 ANTXR1Q9H6X2 564 aa18.46■□□□□ 0.55
APP-211ENST00000462267 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.46■□□□□ 0.55
APP-211ENST00000462267 COL11A1P12107 1806 aaPredicted RBP18.45■□□□□ 0.54
APP-211ENST00000462267 PI4K2BG5E9Z4 385 aa18.45■□□□□ 0.54
APP-211ENST00000462267 ADCY6O43306 1168 aa18.45■□□□□ 0.54
APP-211ENST00000462267 CABYRO75952 493 aa18.45■□□□□ 0.54
APP-211ENST00000462267 AKR1B1P15121 316 aa18.45■□□□□ 0.54
APP-211ENST00000462267 TMEM67Q5HYA8 995 aa18.45■□□□□ 0.54
APP-211ENST00000462267 HLA-CQ95604 372 aa18.45■□□□□ 0.54
APP-211ENST00000462267 NOC4LQ9BVI4 516 aaKnown RBP18.45■□□□□ 0.54
APP-211ENST00000462267 DCP1AQ9NPI6 582 aaPredicted RBP18.45■□□□□ 0.54
APP-211ENST00000462267 TLR7Q9NYK1 1049 aaKnown RBP18.45■□□□□ 0.54
APP-211ENST00000462267 UMODL1Q5DID0 1318 aa18.45■□□□□ 0.54
APP-211ENST00000462267 FAM86C2PA6NEL3 165 aa18.44■□□□□ 0.54
APP-211ENST00000462267 ZBBXA8MT70 800 aa18.44■□□□□ 0.54
APP-211ENST00000462267 CTAGE5O15320 804 aa18.44■□□□□ 0.54
APP-211ENST00000462267 SURF6O75683 361 aaKnown RBP18.44■□□□□ 0.54
APP-211ENST00000462267 CCL23P55773 120 aa18.44■□□□□ 0.54
APP-211ENST00000462267 KHSRPQ92945 711 aaKnown RBP eCLIP18.44■□□□□ 0.54
APP-211ENST00000462267 CCDC8Q9H0W5 538 aaPredicted RBP18.44■□□□□ 0.54
APP-211ENST00000462267 GOPCQ9HD26 462 aa18.44■□□□□ 0.54
APP-211ENST00000462267 RFXAPO00287 272 aa18.43■□□□□ 0.54
APP-211ENST00000462267 EEF2P13639 858 aaKnown RBP18.43■□□□□ 0.54
APP-211ENST00000462267 RARSP54136 660 aaKnown RBP18.43■□□□□ 0.54
APP-211ENST00000462267 SNRNP48Q6IEG0 339 aaKnown RBP18.43■□□□□ 0.54
APP-211ENST00000462267 SSH3Q8TE77 659 aa18.43■□□□□ 0.54
APP-211ENST00000462267 EAF2Q96CJ1 260 aaPredicted RBP18.43■□□□□ 0.54
APP-211ENST00000462267 DYNLL2Q96FJ2 89 aa18.43■□□□□ 0.54
APP-211ENST00000462267 KANSL2Q9H9L4 492 aa18.43■□□□□ 0.54
APP-211ENST00000462267 NAV1Q8NEY1 1877 aa18.43■□□□□ 0.54
APP-211ENST00000462267 SMIM22K7EJ46 135 aa18.42■□□□□ 0.54
APP-211ENST00000462267 CA3P07451 260 aa18.42■□□□□ 0.54
APP-211ENST00000462267 PFKMP08237 780 aa18.42■□□□□ 0.54
APP-211ENST00000462267 CYP2D6P10635 497 aa18.42■□□□□ 0.54
APP-211ENST00000462267 ITGA7Q13683 1181 aa18.42■□□□□ 0.54
APP-211ENST00000462267 FAM83BQ5T0W9 1011 aa18.42■□□□□ 0.54
APP-211ENST00000462267 CXCL17Q6UXB2 119 aa18.42■□□□□ 0.54
APP-211ENST00000462267 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.42■□□□□ 0.54
APP-211ENST00000462267 SDR42E1Q8WUS8 393 aa18.42■□□□□ 0.54
APP-211ENST00000462267 WNT8AQ9H1J5 351 aa18.42■□□□□ 0.54
APP-211ENST00000462267 LRRC37A2A6NM11 1700 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms