RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 PPP1R12AO14974 1030 aaPredicted RBP5.95□□□□□ -1.46
CSMD3-205ENST00000462254 DLGAP3O95886 979 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 B3GALT4O96024 378 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 NOS3P29474 1203 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 IREB2P48200 963 aaKnown RBP5.95□□□□□ -1.46
CSMD3-205ENST00000462254 NRG1Q02297 640 aaPredicted RBP5.95□□□□□ -1.46
CSMD3-205ENST00000462254 GSTM4Q03013 218 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 PAK2Q13177 524 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 SULT6B1Q6IMI4 303 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 DTHD1Q6ZMT9 781 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 DOT1LQ8TEK3 1739 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 WFDC12Q8WWY7 111 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 RUNDC1Q96C34 613 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 RNPC3Q96LT9 517 aaKnown RBP5.95□□□□□ -1.46
CSMD3-205ENST00000462254 NRSN2Q9GZP1 204 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 MRPL18Q9H0U6 180 aaKnown RBP5.95□□□□□ -1.46
CSMD3-205ENST00000462254 PPP4R2Q9NY27 417 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 DDX56Q9NY93 547 aaKnown RBP5.95□□□□□ -1.46
CSMD3-205ENST00000462254 SIRPGQ9P1W8 387 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 BCCIPQ9P287 314 aaKnown RBP eCLIP5.95□□□□□ -1.46
CSMD3-205ENST00000462254 AKAP2Q9Y2D5 859 aa5.95□□□□□ -1.46
CSMD3-205ENST00000462254 THSD7AQ9UPZ6 1657 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 GLI3P10071 1580 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 CRB1P82279 1406 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 F8W735 103 aaPredicted RBP5.94□□□□□ -1.46
CSMD3-205ENST00000462254 MSTNO14793 375 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 PEX14O75381 377 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 EIF3JO75822 258 aaKnown RBP5.94□□□□□ -1.46
CSMD3-205ENST00000462254 ECEL1O95672 775 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 GATA4P43694 442 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 ARL4DP49703 201 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 DUOXA2Q1HG44 320 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 KIAA1211Q6ZU35 1233 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 ACAD11Q709F0 780 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.94□□□□□ -1.46
CSMD3-205ENST00000462254 SMC5Q8IY18 1101 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 TMEM130Q8N3G9 435 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 TCP11L2Q8N4U5 519 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 SEC16BQ96JE7 1060 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 PHACTR3Q96KR7 559 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 TRIM56Q9BRZ2 755 aaKnown RBP5.94□□□□□ -1.46
CSMD3-205ENST00000462254 SOX17Q9H6I2 414 aaPredicted RBP5.94□□□□□ -1.46
CSMD3-205ENST00000462254 AKTIPQ9H8T0 292 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 TYW1Q9NV66 732 aaKnown RBP5.94□□□□□ -1.46
CSMD3-205ENST00000462254 RRP7AQ9Y3A4 280 aaKnown RBP5.94□□□□□ -1.46
CSMD3-205ENST00000462254 CACNA1FO60840 1977 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 SPATA31A6Q5VVP1 1343 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 WDR17Q8IZU2 1322 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 ZNF521Q96K83 1311 aa5.94□□□□□ -1.46
CSMD3-205ENST00000462254 PAPPAQ13219 1627 aa5.93□□□□□ -1.46
CSMD3-205ENST00000462254 FBXO24O75426 580 aa5.93□□□□□ -1.46
CSMD3-205ENST00000462254 S100BP04271 92 aaPredicted RBP5.93□□□□□ -1.46
CSMD3-205ENST00000462254 CTSBP07858 339 aa5.93□□□□□ -1.46
CSMD3-205ENST00000462254 TMPOP42166 694 aaKnown RBP5.93□□□□□ -1.46
CSMD3-205ENST00000462254 TXNRD3Q86VQ6 643 aa5.93□□□□□ -1.46
CSMD3-205ENST00000462254 STAG1Q8WVM7 1258 aa5.93□□□□□ -1.46
CSMD3-205ENST00000462254 USP26Q9BXU7 913 aa5.93□□□□□ -1.46
CSMD3-205ENST00000462254 C12orf49Q9H741 205 aa5.93□□□□□ -1.46
CSMD3-205ENST00000462254 BTG4Q9NY30 223 aa5.93□□□□□ -1.46
CSMD3-205ENST00000462254 BCL9LQ86UU0 1499 aa5.93□□□□□ -1.46
CSMD3-205ENST00000462254 MAPK8IP3Q9UPT6 1336 aa5.93□□□□□ -1.46
CSMD3-205ENST00000462254 UBR2Q8IWV8 1755 aa5.93□□□□□ -1.46
CSMD3-205ENST00000462254 OVOS2A0A0G2JMS6 1433 aa5.92□□□□□ -1.46
CSMD3-205ENST00000462254 DISP2A7MBM2 1401 aa5.92□□□□□ -1.46
CSMD3-205ENST00000462254 C5P01031 1676 aa5.92□□□□□ -1.46
CSMD3-205ENST00000462254 LOC100289279A0A1B0GTE1 492 aa5.92□□□□□ -1.46
CSMD3-205ENST00000462254 GIPC1O14908 333 aa5.92□□□□□ -1.46
CSMD3-205ENST00000462254 USP17L7P0C7H9 530 aa5.92□□□□□ -1.46
CSMD3-205ENST00000462254 GSTT1P30711 240 aa5.92□□□□□ -1.46
CSMD3-205ENST00000462254 ST13P50502 369 aaKnown RBP5.92□□□□□ -1.46
CSMD3-205ENST00000462254 DOC2BQ14184 412 aa5.92□□□□□ -1.46
CSMD3-205ENST00000462254 RPS26P11Q5JNZ5 115 aaPredicted RBP5.92□□□□□ -1.46
CSMD3-205ENST00000462254 ERMP1Q7Z2K6 904 aa5.92□□□□□ -1.46
CSMD3-205ENST00000462254 LRP10Q7Z4F1 713 aa5.92□□□□□ -1.46
CSMD3-205ENST00000462254 CCAR1Q8IX12 1150 aaKnown RBP5.92□□□□□ -1.46
CSMD3-205ENST00000462254 MEGF10Q96KG7 1140 aa5.92□□□□□ -1.46
CSMD3-205ENST00000462254 SRPK1Q96SB4 655 aaKnown RBP5.92□□□□□ -1.46
CSMD3-205ENST00000462254 SRCIN1Q9C0H9 1055 aa5.92□□□□□ -1.46
CSMD3-205ENST00000462254 SLKQ9H2G2 1235 aaPredicted RBP5.92□□□□□ -1.46
CSMD3-205ENST00000462254 PNNQ9H307 717 aaKnown RBP5.92□□□□□ -1.46
CSMD3-205ENST00000462254 LAMB4A4D0S4 1761 aa5.91□□□□□ -1.46
CSMD3-205ENST00000462254 SSBP05455 408 aaKnown RBP eCLIP5.91□□□□□ -1.46
CSMD3-205ENST00000462254 MAOBP27338 520 aa5.91□□□□□ -1.46
CSMD3-205ENST00000462254 AMPD3Q01432 767 aa5.91□□□□□ -1.46
CSMD3-205ENST00000462254 TAF1CQ15572 869 aaPredicted RBP5.91□□□□□ -1.46
CSMD3-205ENST00000462254 MTHFSDQ2M296 383 aaKnown RBP5.91□□□□□ -1.46
CSMD3-205ENST00000462254 TPTE2Q6XPS3 522 aa5.91□□□□□ -1.46
CSMD3-205ENST00000462254 TOM1L2Q6ZVM7 507 aa5.91□□□□□ -1.46
CSMD3-205ENST00000462254 STK35Q8TDR2 534 aa5.91□□□□□ -1.46
CSMD3-205ENST00000462254 FBXO41Q8TF61 875 aa5.91□□□□□ -1.46
CSMD3-205ENST00000462254 SSBP4Q9BWG4 385 aaPredicted RBP5.91□□□□□ -1.46
CSMD3-205ENST00000462254 ZNF408Q9H9D4 720 aa5.91□□□□□ -1.46
CSMD3-205ENST00000462254 TPSG1Q9NRR2 321 aa5.91□□□□□ -1.46
CSMD3-205ENST00000462254 FAM8A1Q9UBU6 413 aa5.91□□□□□ -1.46
CSMD3-205ENST00000462254 PLEKHG2Q9H7P9 1386 aa5.91□□□□□ -1.46
CSMD3-205ENST00000462254 MRC1P22897 1456 aa5.9□□□□□ -1.46
CSMD3-205ENST00000462254 IGHA1P01876 353 aa5.9□□□□□ -1.46
CSMD3-205ENST00000462254 NEFMP07197 916 aa5.9□□□□□ -1.46
CSMD3-205ENST00000462254 PDGFRBP09619 1106 aa5.9□□□□□ -1.46
CSMD3-205ENST00000462254 GLB1P16278 677 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms