RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SMIM22K7EJ46 135 aa13.07□□□□□ -0.32
CBX3-205ENST00000462165 MBD4O95243 580 aa13.07□□□□□ -0.32
CBX3-205ENST00000462165 TIMP1P01033 207 aa13.07□□□□□ -0.32
CBX3-205ENST00000462165 ADD2P35612 726 aa13.07□□□□□ -0.32
CBX3-205ENST00000462165 CCSAPQ6IQ19 270 aaPredicted RBP13.07□□□□□ -0.32
CBX3-205ENST00000462165 AMOTL1Q8IY63 956 aa13.07□□□□□ -0.32
CBX3-205ENST00000462165 USP38Q8NB14 1042 aa13.07□□□□□ -0.32
CBX3-205ENST00000462165 LENG1Q96BZ8 264 aaPredicted RBP13.07□□□□□ -0.32
CBX3-205ENST00000462165 KIF1BPQ96EK5 621 aa13.07□□□□□ -0.32
CBX3-205ENST00000462165 GOPCQ9HD26 462 aa13.07□□□□□ -0.32
CBX3-205ENST00000462165 CNPY2Q9Y2B0 182 aa13.07□□□□□ -0.32
CBX3-205ENST00000462165 SYNGAP1Q96PV0 1343 aa13.07□□□□□ -0.32
CBX3-205ENST00000462165 SYNRGQ9UMZ2 1314 aa13.07□□□□□ -0.32
CBX3-205ENST00000462165 MYH4Q9Y623 1939 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 CYP2D7A0A087X1C5 515 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 USP17L12C9JPN9 530 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 USP17L21D6R901 530 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 FAM83BQ5T0W9 1011 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 MFSD5Q6N075 450 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 MAMDC4Q6UXC1 1216 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 TIFAQ96CG3 184 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.06□□□□□ -0.32
CBX3-205ENST00000462165 ZNF576Q9H609 170 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 PAG1Q9NWQ8 432 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 TBX21Q9UL17 535 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 FAM184BQ9ULE4 1060 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 ELP1O95163 1332 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 MROH7Q68CQ1 1323 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 ZBED9Q6R2W3 1325 aa13.06□□□□□ -0.32
CBX3-205ENST00000462165 XIRP2A4UGR9 3374 aa13.05□□□□□ -0.32
CBX3-205ENST00000462165 DNAJC25-GNG10A0A024R161 153 aa13.05□□□□□ -0.32
CBX3-205ENST00000462165 DUSP11O75319 330 aaKnown RBP13.05□□□□□ -0.32
CBX3-205ENST00000462165 SNAI1O95863 264 aaPredicted RBP13.05□□□□□ -0.32
CBX3-205ENST00000462165 IFIT2P09913 472 aaKnown RBP13.05□□□□□ -0.32
CBX3-205ENST00000462165 CST5P28325 142 aaPredicted RBP13.05□□□□□ -0.32
CBX3-205ENST00000462165 CDK7P50613 346 aa13.05□□□□□ -0.32
CBX3-205ENST00000462165 FXR2P51116 673 aaKnown RBP eCLIP13.05□□□□□ -0.324e-11■□□□□ 8.2
CBX3-205ENST00000462165 KCNA10Q16322 511 aa13.05□□□□□ -0.32
CBX3-205ENST00000462165 SLFNL1Q499Z3 407 aa13.05□□□□□ -0.32
CBX3-205ENST00000462165 TEX13BQ9BXU2 312 aa13.05□□□□□ -0.32
CBX3-205ENST00000462165 GBF1Q92538 1859 aa13.05□□□□□ -0.32
CBX3-205ENST00000462165 MYO9BQ13459 2157 aa13.05□□□□□ -0.32
CBX3-205ENST00000462165 TNFRSF10AO00220 468 aa13.04□□□□□ -0.32
CBX3-205ENST00000462165 PPIGQ13427 754 aaKnown RBP eCLIP13.04□□□□□ -0.326e-10■□□□□ 9.5
CBX3-205ENST00000462165 UBE3CQ15386 1083 aa13.04□□□□□ -0.32
CBX3-205ENST00000462165 TMEM240Q5SV17 173 aa13.04□□□□□ -0.32
CBX3-205ENST00000462165 RASIP1Q5U651 963 aa13.04□□□□□ -0.32
CBX3-205ENST00000462165 CTR9Q6PD62 1173 aa13.04□□□□□ -0.32
CBX3-205ENST00000462165 CCDC174Q6PII3 467 aa13.04□□□□□ -0.32
CBX3-205ENST00000462165 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.04□□□□□ -0.32
CBX3-205ENST00000462165 ZNF467Q7Z7K2 595 aaPredicted RBP13.04□□□□□ -0.32
CBX3-205ENST00000462165 DDRGK1Q96HY6 314 aa13.04□□□□□ -0.32
CBX3-205ENST00000462165 GLT1D1Q96MS3 346 aa13.04□□□□□ -0.32
CBX3-205ENST00000462165 GAS2L1Q99501 681 aaPredicted RBP13.04□□□□□ -0.32
CBX3-205ENST00000462165 SLF1Q9BQI6 1058 aa13.04□□□□□ -0.32
CBX3-205ENST00000462165 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.04□□□□□ -0.32
CBX3-205ENST00000462165 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.32
CBX3-205ENST00000462165 BOLA2Q9H3K6 86 aa13.04□□□□□ -0.32
CBX3-205ENST00000462165 ZHX1Q9UKY1 873 aaPredicted RBP13.04□□□□□ -0.32
CBX3-205ENST00000462165 MYADML2A6NDP7 307 aa13.03□□□□□ -0.32
CBX3-205ENST00000462165 APBB1O00213 710 aa13.03□□□□□ -0.32
CBX3-205ENST00000462165 ATP2A1O14983 1001 aa13.03□□□□□ -0.32
CBX3-205ENST00000462165 RAD21O60216 631 aa13.03□□□□□ -0.32
CBX3-205ENST00000462165 ASGR1P07306 291 aa13.03□□□□□ -0.32
CBX3-205ENST00000462165 ATP5JP18859 108 aa13.03□□□□□ -0.32
CBX3-205ENST00000462165 ACVR2BQ13705 512 aa13.03□□□□□ -0.32
CBX3-205ENST00000462165 SNRNP48Q6IEG0 339 aaKnown RBP13.03□□□□□ -0.32
CBX3-205ENST00000462165 C16orf59Q7L2K0 433 aa13.03□□□□□ -0.32
CBX3-205ENST00000462165 PCSK9Q8NBP7 692 aaKnown RBP13.03□□□□□ -0.32
CBX3-205ENST00000462165 DDX11Q96FC9 970 aa13.03□□□□□ -0.32
CBX3-205ENST00000462165 PBX4Q9BYU1 374 aa13.03□□□□□ -0.32
CBX3-205ENST00000462165 RIPK3Q9Y572 518 aa13.03□□□□□ -0.32
CBX3-205ENST00000462165 SLC4A4Q9Y6R1 1079 aa13.03□□□□□ -0.32
CBX3-205ENST00000462165 A0A0U1RQG5 324 aaPredicted RBP13.02□□□□□ -0.33
CBX3-205ENST00000462165 ARVCFO00192 962 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 ADCY6O43306 1168 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 RAB11FIP3O75154 756 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 CHGBP05060 677 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 C6orf222P0C671 652 aaPredicted RBP13.02□□□□□ -0.33
CBX3-205ENST00000462165 PBX2P40425 430 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 GJA9P57773 515 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 IRX5P78411 483 aaPredicted RBP13.02□□□□□ -0.33
CBX3-205ENST00000462165 AKNAD1Q5T1N1 836 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 RPAP2Q8IXW5 612 aaPredicted RBP13.02□□□□□ -0.33
CBX3-205ENST00000462165 TMEM199Q8N511 208 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 PRPF38AQ8NAV1 312 aaKnown RBP13.02□□□□□ -0.33
CBX3-205ENST00000462165 PANK1Q8TE04 598 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 ATXN2LQ8WWM7 1075 aaKnown RBP13.02□□□□□ -0.33
CBX3-205ENST00000462165 NUP88Q99567 741 aaPredicted RBP13.02□□□□□ -0.33
CBX3-205ENST00000462165 HAUS7Q99871 368 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 UPF3AQ9H1J1 476 aaKnown RBP13.02□□□□□ -0.33
CBX3-205ENST00000462165 ABHD16BQ9H3Z7 469 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 SPC25Q9HBM1 224 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.02□□□□□ -0.33
CBX3-205ENST00000462165 NYAP2Q9P242 653 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 ARPP21Q9UBL0 812 aaPredicted RBP13.02□□□□□ -0.33
CBX3-205ENST00000462165 TRANK1O15050 2925 aa13.02□□□□□ -0.33
CBX3-205ENST00000462165 GRXCR1A8MXD5 290 aa13.01□□□□□ -0.33
CBX3-205ENST00000462165 F5H6K3 240 aa13.01□□□□□ -0.33
CBX3-205ENST00000462165 HMMRO75330 724 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms