RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ATP2A1O14983 1001 aa22.47■■□□□ 1.19
VARS-220ENST00000461874 ZBED4O75132 1171 aa22.47■■□□□ 1.19
VARS-220ENST00000461874 FGAP02671 866 aa22.47■■□□□ 1.19
VARS-220ENST00000461874 FGRP09769 529 aa22.47■■□□□ 1.19
VARS-220ENST00000461874 SNRNP48Q6IEG0 339 aaKnown RBP22.47■■□□□ 1.19
VARS-220ENST00000461874 KIFC2Q96AC6 838 aa22.47■■□□□ 1.19
VARS-220ENST00000461874 IL17RBQ9NRM6 502 aa22.47■■□□□ 1.19
VARS-220ENST00000461874 DIS3Q9Y2L1 958 aaKnown RBP22.47■■□□□ 1.19
VARS-220ENST00000461874 SUPT16HQ9Y5B9 1047 aaKnown RBP22.47■■□□□ 1.19
VARS-220ENST00000461874 SEPT4O43236 478 aa22.46■■□□□ 1.19
VARS-220ENST00000461874 ORC4O43929 436 aa22.46■■□□□ 1.19
VARS-220ENST00000461874 HSPD1P10809 573 aaKnown RBP22.46■■□□□ 1.19
VARS-220ENST00000461874 BMP3P12645 472 aa22.46■■□□□ 1.19
VARS-220ENST00000461874 ZNF792Q3KQV3 632 aa22.46■■□□□ 1.19
VARS-220ENST00000461874 PRAMEF19Q5SWL8 479 aa22.46■■□□□ 1.19
VARS-220ENST00000461874 ZNF589Q86UQ0 364 aaPredicted RBP22.46■■□□□ 1.19
VARS-220ENST00000461874 SLC38A10Q9HBR0 1119 aa22.46■■□□□ 1.19
VARS-220ENST00000461874 RIPK3Q9Y572 518 aa22.46■■□□□ 1.19
VARS-220ENST00000461874 COL11A1P12107 1806 aaPredicted RBP22.45■■□□□ 1.19
VARS-220ENST00000461874 RANBP6O60518 1105 aaKnown RBP22.45■■□□□ 1.18
VARS-220ENST00000461874 CPXCR1Q8N123 301 aa22.45■■□□□ 1.18
VARS-220ENST00000461874 GMCL1Q96IK5 515 aa22.45■■□□□ 1.18
VARS-220ENST00000461874 STX8Q9UNK0 236 aa22.45■■□□□ 1.18
VARS-220ENST00000461874 CTDP1Q9Y5B0 961 aaPredicted RBP22.45■■□□□ 1.18
VARS-220ENST00000461874 NMT2O60551 498 aa22.44■■□□□ 1.18
VARS-220ENST00000461874 SDSP20132 328 aa22.44■■□□□ 1.18
VARS-220ENST00000461874 CCDC171Q6TFL3 1326 aa22.44■■□□□ 1.18
VARS-220ENST00000461874 ALPK3Q96L96 1907 aa22.44■■□□□ 1.18
VARS-220ENST00000461874 TINF2Q9BSI4 451 aa22.44■■□□□ 1.18
VARS-220ENST00000461874 RAVER2Q9HCJ3 691 aaKnown RBP22.44■■□□□ 1.18
VARS-220ENST00000461874 NRBP1Q9UHY1 535 aa22.44■■□□□ 1.18
VARS-220ENST00000461874 ZMYND8Q9ULU4 1186 aaPredicted RBP22.44■■□□□ 1.18
VARS-220ENST00000461874 MYH4Q9Y623 1939 aa22.44■■□□□ 1.18
VARS-220ENST00000461874 ZMYM6O95789 1325 aa22.43■■□□□ 1.18
VARS-220ENST00000461874 TMEM232C9JQI7 657 aa22.43■■□□□ 1.18
VARS-220ENST00000461874 DNM1LO00429 736 aa22.43■■□□□ 1.18
VARS-220ENST00000461874 MCCP23508 829 aa22.43■■□□□ 1.18
VARS-220ENST00000461874 SLC1A4P43007 532 aa22.43■■□□□ 1.18
VARS-220ENST00000461874 NOVP48745 357 aa22.43■■□□□ 1.18
VARS-220ENST00000461874 OAZ1P54368 228 aa22.43■■□□□ 1.18
VARS-220ENST00000461874 LRRC26Q2I0M4 334 aa22.43■■□□□ 1.18
VARS-220ENST00000461874 SENP6Q9GZR1 1112 aaPredicted RBP22.43■■□□□ 1.18
VARS-220ENST00000461874 FDX1P10109 184 aa22.42■■□□□ 1.18
VARS-220ENST00000461874 SLC4A3P48751 1232 aa22.42■■□□□ 1.18
VARS-220ENST00000461874 STAT2P52630 851 aa22.42■■□□□ 1.18
VARS-220ENST00000461874 ANO1Q5XXA6 986 aa22.42■■□□□ 1.18
VARS-220ENST00000461874 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.42■■□□□ 1.18
VARS-220ENST00000461874 FAM160B2Q86V87 743 aa22.42■■□□□ 1.18
VARS-220ENST00000461874 ARRDC4Q8NCT1 418 aa22.42■■□□□ 1.18
VARS-220ENST00000461874 CHURC1Q8WUH1 139 aa22.42■■□□□ 1.18
VARS-220ENST00000461874 STAG1Q8WVM7 1258 aa22.42■■□□□ 1.18
VARS-220ENST00000461874 ZNFX1Q9P2E3 1918 aaKnown RBP22.41■■□□□ 1.18
VARS-220ENST00000461874 DNAJC25-GNG10A0A024R161 153 aa22.41■■□□□ 1.18
VARS-220ENST00000461874 PLA2G6O60733 806 aa22.41■■□□□ 1.18
VARS-220ENST00000461874 MFAP1P55081 439 aaKnown RBP22.41■■□□□ 1.18
VARS-220ENST00000461874 CHMP4CQ96CF2 233 aa22.41■■□□□ 1.18
VARS-220ENST00000461874 DDX11Q96FC9 970 aa22.41■■□□□ 1.18
VARS-220ENST00000461874 TOMM22Q9NS69 142 aa22.41■■□□□ 1.18
VARS-220ENST00000461874 ISY1Q9ULR0 285 aaKnown RBP22.41■■□□□ 1.18
VARS-220ENST00000461874 SYN1P17600 705 aa22.4■■□□□ 1.18
VARS-220ENST00000461874 HAND2P61296 217 aa22.4■■□□□ 1.18
VARS-220ENST00000461874 GJC2Q5T442 439 aaPredicted RBP22.4■■□□□ 1.18
VARS-220ENST00000461874 RCSD1Q6JBY9 416 aa22.4■■□□□ 1.18
VARS-220ENST00000461874 MSL3Q8N5Y2 521 aaKnown RBP22.4■■□□□ 1.18
VARS-220ENST00000461874 CHST13Q8NET6 341 aa22.4■■□□□ 1.18
VARS-220ENST00000461874 GDF15Q99988 308 aa22.4■■□□□ 1.18
VARS-220ENST00000461874 FBXO40Q9UH90 709 aa22.4■■□□□ 1.18
VARS-220ENST00000461874 A0A1W2PPC1 479 aa22.39■■□□□ 1.17
VARS-220ENST00000461874 TAL1P17542 331 aaPredicted RBP22.39■■□□□ 1.17
VARS-220ENST00000461874 IKQ13123 557 aaPredicted RBP22.39■■□□□ 1.17
VARS-220ENST00000461874 RRP12Q5JTH9 1297 aaKnown RBP22.39■■□□□ 1.17
VARS-220ENST00000461874 KCTD1Q719H9 257 aa22.39■■□□□ 1.17
VARS-220ENST00000461874 TCP11L1Q9NUJ3 509 aa22.39■■□□□ 1.17
VARS-220ENST00000461874 FRMPD3Q5JV73 1810 aa22.38■■□□□ 1.17
VARS-220ENST00000461874 ZNF865P0CJ78 1059 aaPredicted RBP22.38■■□□□ 1.17
VARS-220ENST00000461874 PCP11498 1178 aaKnown RBP22.38■■□□□ 1.17
VARS-220ENST00000461874 BMP8BP34820 402 aa22.38■■□□□ 1.17
VARS-220ENST00000461874 ANKRD35Q8N283 1001 aa22.38■■□□□ 1.17
VARS-220ENST00000461874 DIAPH3Q9NSV4 1193 aa22.38■■□□□ 1.17
VARS-220ENST00000461874 PCDH10Q9P2E7 1040 aa22.38■■□□□ 1.17
VARS-220ENST00000461874 ZNF536O15090 1300 aa22.37■■□□□ 1.17
VARS-220ENST00000461874 KBTBD13C9JR72 458 aa22.37■■□□□ 1.17
VARS-220ENST00000461874 HIP1O00291 1037 aa22.37■■□□□ 1.17
VARS-220ENST00000461874 LRRC41Q15345 812 aa22.37■■□□□ 1.17
VARS-220ENST00000461874 AKNAD1Q5T1N1 836 aa22.37■■□□□ 1.17
VARS-220ENST00000461874 CWC27Q6UX04 472 aaKnown RBP22.37■■□□□ 1.17
VARS-220ENST00000461874 MAMDC4Q6UXC1 1216 aa22.37■■□□□ 1.17
VARS-220ENST00000461874 MFSD6Q6ZSS7 791 aa22.37■■□□□ 1.17
VARS-220ENST00000461874 RASGRP2Q7LDG7 609 aa22.37■■□□□ 1.17
VARS-220ENST00000461874 ZNF467Q7Z7K2 595 aaPredicted RBP22.37■■□□□ 1.17
VARS-220ENST00000461874 CNPY2Q9Y2B0 182 aa22.37■■□□□ 1.17
VARS-220ENST00000461874 SYNGAP1Q96PV0 1343 aa22.36■■□□□ 1.17
VARS-220ENST00000461874 SNAI1O95863 264 aaPredicted RBP22.36■■□□□ 1.17
VARS-220ENST00000461874 MYCNP04198 464 aaPredicted RBP22.36■■□□□ 1.17
VARS-220ENST00000461874 RARBP10826 455 aa22.36■■□□□ 1.17
VARS-220ENST00000461874 TOP1P11387 765 aaKnown RBP22.36■■□□□ 1.17
VARS-220ENST00000461874 ATN1P54259 1190 aaPredicted RBP22.36■■□□□ 1.17
VARS-220ENST00000461874 TBC1D10CQ8IV04 446 aa22.36■■□□□ 1.17
VARS-220ENST00000461874 DCAF4Q8WV16 495 aa22.36■■□□□ 1.17
VARS-220ENST00000461874 AGBL1Q96MI9 1066 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms