RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 DDX20Q9UHI6 824 aaKnown RBP16.33■□□□□ 0.2
RBM39-222ENST00000461849 STX8Q9UNK0 236 aa16.33■□□□□ 0.2
RBM39-222ENST00000461849 CCDC171Q6TFL3 1326 aa16.33■□□□□ 0.2
RBM39-222ENST00000461849 PLIN4Q96Q06 1357 aa16.33■□□□□ 0.2
RBM39-222ENST00000461849 PARP14Q460N5 1801 aa16.33■□□□□ 0.2
RBM39-222ENST00000461849 ZNF236Q9UL36 1845 aa16.33■□□□□ 0.2
RBM39-222ENST00000461849 MYH4Q9Y623 1939 aa16.33■□□□□ 0.2
RBM39-222ENST00000461849 RANBP6O60518 1105 aaKnown RBP16.32■□□□□ 0.2
RBM39-222ENST00000461849 COBLO75128 1261 aa16.32■□□□□ 0.2
RBM39-222ENST00000461849 COL11A1P12107 1806 aaPredicted RBP16.32■□□□□ 0.2
RBM39-222ENST00000461849 SLC4A3P48751 1232 aa16.32■□□□□ 0.2
RBM39-222ENST00000461849 SLFN13Q68D06 897 aa16.32■□□□□ 0.2
RBM39-222ENST00000461849 SNRNP48Q6IEG0 339 aaKnown RBP16.32■□□□□ 0.2
RBM39-222ENST00000461849 GMCL1P1Q8NEA9 526 aa16.32■□□□□ 0.2
RBM39-222ENST00000461849 TEX13BQ9BXU2 312 aa16.32■□□□□ 0.2
RBM39-222ENST00000461849 FEM1BQ9UK73 627 aa16.32■□□□□ 0.2
RBM39-222ENST00000461849 ZNF214Q9UL59 606 aaPredicted RBP16.32■□□□□ 0.2
RBM39-222ENST00000461849 EIF5BO60841 1220 aaKnown RBP16.31■□□□□ 0.2
RBM39-222ENST00000461849 BMP3P12645 472 aa16.31■□□□□ 0.2
RBM39-222ENST00000461849 IKQ13123 557 aaPredicted RBP16.31■□□□□ 0.2
RBM39-222ENST00000461849 C7orf61Q8IZ16 206 aa16.31■□□□□ 0.2
RBM39-222ENST00000461849 CPXCR1Q8N123 301 aa16.31■□□□□ 0.2
RBM39-222ENST00000461849 MAML3Q96JK9 1138 aa16.31■□□□□ 0.2
RBM39-222ENST00000461849 ANAPC4Q9UJX5 808 aa16.31■□□□□ 0.2
RBM39-222ENST00000461849 FOXP2O15409 715 aa16.3■□□□□ 0.2
RBM39-222ENST00000461849 FGAP02671 866 aa16.3■□□□□ 0.2
RBM39-222ENST00000461849 HSPD1P10809 573 aaKnown RBP16.3■□□□□ 0.2
RBM39-222ENST00000461849 CYBAP13498 195 aa16.3■□□□□ 0.2
RBM39-222ENST00000461849 SLC1A4P43007 532 aa16.3■□□□□ 0.2
RBM39-222ENST00000461849 MNX1P50219 401 aaPredicted RBP16.3■□□□□ 0.2
RBM39-222ENST00000461849 ALX1Q15699 326 aa16.3■□□□□ 0.2
RBM39-222ENST00000461849 ZNF589Q86UQ0 364 aaPredicted RBP16.3■□□□□ 0.2
RBM39-222ENST00000461849 REPS2Q8NFH8 660 aa16.3■□□□□ 0.2
RBM39-222ENST00000461849 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
RBM39-222ENST00000461849 ZMYM6O95789 1325 aa16.29■□□□□ 0.2
RBM39-222ENST00000461849 TMEM232C9JQI7 657 aa16.29■□□□□ 0.2
RBM39-222ENST00000461849 PGK2P07205 417 aa16.29■□□□□ 0.2
RBM39-222ENST00000461849 FDX1P10109 184 aa16.29■□□□□ 0.2
RBM39-222ENST00000461849 STAT2P52630 851 aa16.29■□□□□ 0.2
RBM39-222ENST00000461849 RRP12Q5JTH9 1297 aaKnown RBP16.29■□□□□ 0.2
RBM39-222ENST00000461849 CHURC1Q8WUH1 139 aa16.29■□□□□ 0.2
RBM39-222ENST00000461849 DDX11Q96FC9 970 aa16.29■□□□□ 0.2
RBM39-222ENST00000461849 IL25Q9H293 177 aa16.29■□□□□ 0.2
RBM39-222ENST00000461849 INCENPQ9NQS7 918 aa16.29■□□□□ 0.2
RBM39-222ENST00000461849 DIS3Q9Y2L1 958 aaKnown RBP16.29■□□□□ 0.2
RBM39-222ENST00000461849 PFASO15067 1338 aa16.28■□□□□ 0.2
RBM39-222ENST00000461849 ATP2A1O14983 1001 aa16.28■□□□□ 0.2
RBM39-222ENST00000461849 SEPT4O43236 478 aa16.28■□□□□ 0.2
RBM39-222ENST00000461849 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
RBM39-222ENST00000461849 MCCP23508 829 aa16.28■□□□□ 0.2
RBM39-222ENST00000461849 FAM160B2Q86V87 743 aa16.28■□□□□ 0.2
RBM39-222ENST00000461849 ARRDC4Q8NCT1 418 aa16.28■□□□□ 0.2
RBM39-222ENST00000461849 TRPV1Q8NER1 839 aa16.28■□□□□ 0.2
RBM39-222ENST00000461849 CHMP4CQ96CF2 233 aa16.28■□□□□ 0.2
RBM39-222ENST00000461849 TINF2Q9BSI4 451 aa16.28■□□□□ 0.2
RBM39-222ENST00000461849 DSCC1Q9BVC3 393 aa16.28■□□□□ 0.2
RBM39-222ENST00000461849 SENP6Q9GZR1 1112 aaPredicted RBP16.28■□□□□ 0.2
RBM39-222ENST00000461849 SLC38A10Q9HBR0 1119 aa16.28■□□□□ 0.2
RBM39-222ENST00000461849 RAVER2Q9HCJ3 691 aaKnown RBP16.28■□□□□ 0.2
RBM39-222ENST00000461849 RBM27Q9P2N5 1060 aaKnown RBP16.28■□□□□ 0.2
RBM39-222ENST00000461849 CEP290O15078 2479 aa16.28■□□□□ 0.2
RBM39-222ENST00000461849 DNM1LO00429 736 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 EPB41L2O43491 1005 aaKnown RBP16.27■□□□□ 0.2
RBM39-222ENST00000461849 ORC4O43929 436 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 IGHA2P01877 340 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 COL6A1P12109 1028 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 OAZ1P54368 228 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 ZNF792Q3KQV3 632 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 C8orf34Q49A92 452 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 PRAMEF19Q5SWL8 479 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 ANO1Q5XXA6 986 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 MFSD6Q6ZSS7 791 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 KIAA1211Q6ZU35 1233 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 ANKRD35Q8N283 1001 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 STAG1Q8WVM7 1258 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 GMCL1Q96IK5 515 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 FBXO40Q9UH90 709 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 NRBP1Q9UHY1 535 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 ZMYND8Q9ULU4 1186 aaPredicted RBP16.27■□□□□ 0.2
RBM39-222ENST00000461849 MTMR7Q9Y216 660 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 RIPK3Q9Y572 518 aa16.27■□□□□ 0.2
RBM39-222ENST00000461849 ZNFX1Q9P2E3 1918 aaKnown RBP16.27■□□□□ 0.19
RBM39-222ENST00000461849 KBTBD13C9JR72 458 aa16.26■□□□□ 0.19
RBM39-222ENST00000461849 NMT2O60551 498 aa16.26■□□□□ 0.19
RBM39-222ENST00000461849 REC8O95072 547 aa16.26■□□□□ 0.19
RBM39-222ENST00000461849 HAND2P61296 217 aa16.26■□□□□ 0.19
RBM39-222ENST00000461849 CHST13Q8NET6 341 aa16.26■□□□□ 0.19
RBM39-222ENST00000461849 RNF41Q9H4P4 317 aaPredicted RBP16.26■□□□□ 0.19
RBM39-222ENST00000461849 CNPY2Q9Y2B0 182 aa16.26■□□□□ 0.19
RBM39-222ENST00000461849 FRMPD3Q5JV73 1810 aa16.26■□□□□ 0.19
RBM39-222ENST00000461849 ZNF213O14771 459 aa16.25■□□□□ 0.19
RBM39-222ENST00000461849 FGRP09769 529 aa16.25■□□□□ 0.19
RBM39-222ENST00000461849 RARBP10826 455 aa16.25■□□□□ 0.19
RBM39-222ENST00000461849 PCP11498 1178 aaKnown RBP16.25■□□□□ 0.19
RBM39-222ENST00000461849 FXR1P51114 621 aaKnown RBP eCLIP16.25■□□□□ 0.19
RBM39-222ENST00000461849 CCDC96Q2M329 555 aa16.25■□□□□ 0.19
RBM39-222ENST00000461849 GJC2Q5T442 439 aaPredicted RBP16.25■□□□□ 0.19
RBM39-222ENST00000461849 RCSD1Q6JBY9 416 aa16.25■□□□□ 0.19
RBM39-222ENST00000461849 KCTD1Q719H9 257 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms