RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 TTLL1O95922 423 aa23.01■■□□□ 1.27
CCM2-203ENST00000461377 LRRC47Q8N1G4 583 aaKnown RBP23.01■■□□□ 1.27
CCM2-203ENST00000461377 PIGSQ96S52 555 aa23.01■■□□□ 1.27
CCM2-203ENST00000461377 PYM1Q9BRP8 204 aaKnown RBP23.01■■□□□ 1.27
CCM2-203ENST00000461377 DACH1Q9UI36 760 aa23.01■■□□□ 1.27
CCM2-203ENST00000461377 NEMFO60524 1076 aa23■■□□□ 1.27
CCM2-203ENST00000461377 LONP1P36776 959 aaKnown RBP23■■□□□ 1.27
CCM2-203ENST00000461377 FANCCQ00597 558 aa23■■□□□ 1.27
CCM2-203ENST00000461377 E2F4Q16254 413 aa23■■□□□ 1.27
CCM2-203ENST00000461377 HOMER1Q86YM7 354 aa23■■□□□ 1.27
CCM2-203ENST00000461377 R3HCC1Q9Y3T6 440 aaKnown RBP23■■□□□ 1.27
CCM2-203ENST00000461377 SCN9AQ15858 1988 aa23■■□□□ 1.27
CCM2-203ENST00000461377 GREB1LQ9C091 1923 aaPredicted RBP23■■□□□ 1.27
CCM2-203ENST00000461377 hCG_1984214I3L0E3 225 aa23■■□□□ 1.27
CCM2-203ENST00000461377 INF2Q27J81 1249 aa23■■□□□ 1.27
CCM2-203ENST00000461377 CC2D2BQ6DHV5 1058 aa23■■□□□ 1.27
CCM2-203ENST00000461377 POTEAQ6S8J7 498 aa23■■□□□ 1.27
CCM2-203ENST00000461377 KRT25Q7Z3Z0 450 aa23■■□□□ 1.27
CCM2-203ENST00000461377 LRRC8AQ8IWT6 810 aa23■■□□□ 1.27
CCM2-203ENST00000461377 ZFPM1Q8IX07 1006 aa23■■□□□ 1.27
CCM2-203ENST00000461377 ZNF713Q8N859 430 aaPredicted RBP23■■□□□ 1.27
CCM2-203ENST00000461377 UBA5Q9GZZ9 404 aa23■■□□□ 1.27
CCM2-203ENST00000461377 C6orf50Q9HD87 102 aa23■■□□□ 1.27
CCM2-203ENST00000461377 IMPACTQ9P2X3 320 aa23■■□□□ 1.27
CCM2-203ENST00000461377 PCDHAC2Q9Y5I4 1007 aa23■■□□□ 1.27
CCM2-203ENST00000461377 MYH8P13535 1937 aa22.99■■□□□ 1.27
CCM2-203ENST00000461377 FRMPD2Q68DX3 1309 aaPredicted RBP22.99■■□□□ 1.27
CCM2-203ENST00000461377 ATP1A3P13637 1013 aa22.99■■□□□ 1.27
CCM2-203ENST00000461377 GNA11P29992 359 aa22.99■■□□□ 1.27
CCM2-203ENST00000461377 CLEC10AQ8IUN9 316 aa22.99■■□□□ 1.27
CCM2-203ENST00000461377 IDI2Q9BXS1 227 aa22.99■■□□□ 1.27
CCM2-203ENST00000461377 ESYT2A0FGR8 921 aa22.98■■□□□ 1.27
CCM2-203ENST00000461377 SMCO2A6NFE2 343 aa22.98■■□□□ 1.27
CCM2-203ENST00000461377 AFMP43652 599 aa22.98■■□□□ 1.27
CCM2-203ENST00000461377 EIF6P56537 245 aaKnown RBP22.98■■□□□ 1.27
CCM2-203ENST00000461377 DPYDQ12882 1025 aa22.98■■□□□ 1.27
CCM2-203ENST00000461377 AOC3Q16853 763 aa22.98■■□□□ 1.27
CCM2-203ENST00000461377 FILIP1Q7Z7B0 1213 aa22.98■■□□□ 1.27
CCM2-203ENST00000461377 DHX36Q9H2U1 1008 aaKnown RBP22.98■■□□□ 1.27
CCM2-203ENST00000461377 VAT1LQ9HCJ6 419 aa22.98■■□□□ 1.27
CCM2-203ENST00000461377 SERPINA10Q9UK55 444 aa22.98■■□□□ 1.27
CCM2-203ENST00000461377 IQUBQ8NA54 791 aa22.98■■□□□ 1.27
CCM2-203ENST00000461377 CCDC17Q96LX7 622 aa22.98■■□□□ 1.27
CCM2-203ENST00000461377 FAM198AQ9UFP1 575 aa22.98■■□□□ 1.27
CCM2-203ENST00000461377 NPM3O75607 178 aaKnown RBP22.97■■□□□ 1.27
CCM2-203ENST00000461377 GSDMDP57764 484 aa22.97■■□□□ 1.27
CCM2-203ENST00000461377 ZNF543Q08ER8 600 aa22.97■■□□□ 1.27
CCM2-203ENST00000461377 ARID5BQ14865 1188 aa22.97■■□□□ 1.27
CCM2-203ENST00000461377 SOGA3Q5TF21 947 aa22.97■■□□□ 1.27
CCM2-203ENST00000461377 SUPT20HQ8NEM7 779 aa22.97■■□□□ 1.27
CCM2-203ENST00000461377 ENOX1Q8TC92 643 aaKnown RBP22.97■■□□□ 1.27
CCM2-203ENST00000461377 DNAJC18Q9H819 358 aa22.97■■□□□ 1.27
CCM2-203ENST00000461377 FANCLQ9NW38 375 aa22.97■■□□□ 1.27
CCM2-203ENST00000461377 LAD1O00515 517 aa22.96■■□□□ 1.27
CCM2-203ENST00000461377 FMR1Q06787 632 aaKnown RBP eCLIP22.96■■□□□ 1.278e-10■■■■■ 77.9
CCM2-203ENST00000461377 CT47A1Q5JQC4 288 aaPredicted RBP22.96■■□□□ 1.27
CCM2-203ENST00000461377 PPP4R3BQ5MIZ7 849 aa22.96■■□□□ 1.27
CCM2-203ENST00000461377 PDXDC2PQ6P474 469 aa22.96■■□□□ 1.27
CCM2-203ENST00000461377 GSDMAQ96QA5 445 aa22.96■■□□□ 1.27
CCM2-203ENST00000461377 TMEM60Q9H2L4 133 aa22.96■■□□□ 1.27
CCM2-203ENST00000461377 SIPA1L1O43166 1804 aa22.96■■□□□ 1.27
CCM2-203ENST00000461377 CACNB3P54284 484 aa22.96■■□□□ 1.27
CCM2-203ENST00000461377 NONOQ15233 471 aaKnown RBP eCLIP22.96■■□□□ 1.27
CCM2-203ENST00000461377 CBFA2T2O43439 604 aa22.95■■□□□ 1.26
CCM2-203ENST00000461377 ERCC5P28715 1186 aaPredicted RBP22.95■■□□□ 1.26
CCM2-203ENST00000461377 PRPHP41219 470 aa22.95■■□□□ 1.26
CCM2-203ENST00000461377 RBM5P52756 815 aaKnown RBP eCLIP22.95■■□□□ 1.26
CCM2-203ENST00000461377 DTHD1Q6ZMT9 781 aa22.95■■□□□ 1.26
CCM2-203ENST00000461377 MPHOSPH10O00566 681 aaKnown RBP22.94■■□□□ 1.26
CCM2-203ENST00000461377 CASP1P29466 404 aa22.94■■□□□ 1.26
CCM2-203ENST00000461377 TXLNAP40222 546 aa22.94■■□□□ 1.26
CCM2-203ENST00000461377 DNTTIP2Q5QJE6 756 aaKnown RBP22.94■■□□□ 1.26
CCM2-203ENST00000461377 TMC6Q7Z403 805 aa22.94■■□□□ 1.26
CCM2-203ENST00000461377 GPCPD1Q9NPB8 672 aa22.94■■□□□ 1.26
CCM2-203ENST00000461377 DDTLA6NHG4 134 aaPredicted RBP22.94■■□□□ 1.26
CCM2-203ENST00000461377 TPM2P07951 284 aa22.94■■□□□ 1.26
CCM2-203ENST00000461377 SLURP2P0DP57 97 aa22.94■■□□□ 1.26
CCM2-203ENST00000461377 CCZ1BP86790 482 aa22.94■■□□□ 1.26
CCM2-203ENST00000461377 CCZ1P86791 482 aaPredicted RBP22.94■■□□□ 1.26
CCM2-203ENST00000461377 TCP10Q12799 353 aa22.94■■□□□ 1.26
CCM2-203ENST00000461377 SH3BP5LQ7L8J4 393 aa22.94■■□□□ 1.26
CCM2-203ENST00000461377 PI4KBQ9UBF8 816 aa22.94■■□□□ 1.26
CCM2-203ENST00000461377 SERPINC1P01008 464 aa22.93■■□□□ 1.26
CCM2-203ENST00000461377 ZNF18P17022 549 aa22.93■■□□□ 1.26
CCM2-203ENST00000461377 UBASH3AP57075 661 aa22.93■■□□□ 1.26
CCM2-203ENST00000461377 DPF2Q92785 391 aa22.93■■□□□ 1.26
CCM2-203ENST00000461377 MED15Q96RN5 788 aa22.93■■□□□ 1.26
CCM2-203ENST00000461377 GPATCH4Q5T3I0 446 aaKnown RBP22.92■■□□□ 1.26
CCM2-203ENST00000461377 REXO1Q8N1G1 1221 aaKnown RBP22.92■■□□□ 1.26
CCM2-203ENST00000461377 MTRQ99707 1265 aa22.92■■□□□ 1.26
CCM2-203ENST00000461377 NFE2L3Q9Y4A8 694 aa22.92■■□□□ 1.26
CCM2-203ENST00000461377 YDJCA8MPS7 323 aa22.92■■□□□ 1.26
CCM2-203ENST00000461377 PPIP5K2O43314 1243 aa22.92■■□□□ 1.26
CCM2-203ENST00000461377 GTPBP6O43824 516 aaPredicted RBP22.92■■□□□ 1.26
CCM2-203ENST00000461377 DHX8Q14562 1220 aaKnown RBP22.92■■□□□ 1.26
CCM2-203ENST00000461377 PPP1R18Q6NYC8 613 aa22.92■■□□□ 1.26
CCM2-203ENST00000461377 NEK8Q86SG6 692 aa22.92■■□□□ 1.26
CCM2-203ENST00000461377 CCDC150Q8NCX0 1101 aa22.92■■□□□ 1.26
CCM2-203ENST00000461377 JMJD4Q9H9V9 463 aa22.92■■□□□ 1.26
CCM2-203ENST00000461377 PNMA6FA0A0J9YX94 578 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms