RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 STK17AQ9UEE5 414 aa10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 ERBB4Q15303 1308 aa10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 B3GALT4O96024 378 aa10.26□□□□□ -0.77
ECHDC1-212ENST00000461239 MMP10P09238 476 aa10.26□□□□□ -0.77
ECHDC1-212ENST00000461239 PTPRAP18433 802 aa10.26□□□□□ -0.77
ECHDC1-212ENST00000461239 TFE3P19532 575 aaPredicted RBP10.26□□□□□ -0.77
ECHDC1-212ENST00000461239 LMNB2Q03252 620 aa10.26□□□□□ -0.77
ECHDC1-212ENST00000461239 FAM160A1Q05DH4 1040 aa10.26□□□□□ -0.77
ECHDC1-212ENST00000461239 CAMK2GQ13555 558 aaPredicted RBP10.26□□□□□ -0.77
ECHDC1-212ENST00000461239 PCNX4Q63HM2 1172 aa10.26□□□□□ -0.77
ECHDC1-212ENST00000461239 ELMSAN1Q6PJG2 1045 aa10.26□□□□□ -0.77
ECHDC1-212ENST00000461239 NT5C1AQ9BXI3 368 aa10.26□□□□□ -0.77
ECHDC1-212ENST00000461239 DDX21Q9NR30 783 aaKnown RBP eCLIP10.26□□□□□ -0.77
ECHDC1-212ENST00000461239 NXF1Q9UBU9 619 aaKnown RBP10.26□□□□□ -0.77
ECHDC1-212ENST00000461239 TRIM33Q9UPN9 1127 aa10.26□□□□□ -0.77
ECHDC1-212ENST00000461239 A0A087WZG4 1122 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 NEURL1BA8MQ27 555 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 POLRMTO00411 1230 aaKnown RBP10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 MAP2K3P46734 347 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 ZNF157P51786 506 aaPredicted RBP10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 PCDH1Q08174 1060 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 RBL2Q08999 1139 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 NFIXQ14938 502 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 ZNF423Q2M1K9 1284 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 TWISTNBQ3B726 338 aaPredicted RBP10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 RASIP1Q5U651 963 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 TBC1D9BQ66K14 1250 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 DPH6Q7L8W6 267 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 NLGN1Q8N2Q7 840 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 SEC16BQ96JE7 1060 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 SPATA32Q96LK8 384 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 SUPT16HQ9Y5B9 1047 aaKnown RBP10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 SCN7AQ01118 1682 aa10.25□□□□□ -0.77
ECHDC1-212ENST00000461239 ELOA3CA0A087WX78 387 aaPredicted RBP10.24□□□□□ -0.77
ECHDC1-212ENST00000461239 ELOA3DA6NLF2 546 aaPredicted RBP10.24□□□□□ -0.77
ECHDC1-212ENST00000461239 H3BM21 787 aa10.24□□□□□ -0.77
ECHDC1-212ENST00000461239 TCERG1O14776 1098 aaKnown RBP10.24□□□□□ -0.77
ECHDC1-212ENST00000461239 ELOA3BQ3SY89 546 aa10.24□□□□□ -0.77
ECHDC1-212ENST00000461239 COPS6Q7L5N1 327 aa10.24□□□□□ -0.77
ECHDC1-212ENST00000461239 MICALL1Q8N3F8 863 aa10.24□□□□□ -0.77
ECHDC1-212ENST00000461239 ELOA3Q8NG57 546 aa10.24□□□□□ -0.77
ECHDC1-212ENST00000461239 XAGE3Q8WTP9 111 aa10.24□□□□□ -0.77
ECHDC1-212ENST00000461239 TTC9Q92623 222 aa10.24□□□□□ -0.77
ECHDC1-212ENST00000461239 PHAXQ9H814 394 aaKnown RBP10.24□□□□□ -0.77
ECHDC1-212ENST00000461239 BCORQ6W2J9 1755 aa10.24□□□□□ -0.77
ECHDC1-212ENST00000461239 BMP6P22004 513 aa10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 POLD1P28340 1107 aa10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 HNRNPUQ00839 825 aaKnown RBP eCLIP10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 PSAPL1Q6NUJ1 521 aa10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 G2E3Q7L622 706 aa10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 NPAS3Q8IXF0 933 aa10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 GOLM1Q8NBJ4 401 aa10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 LNPKQ9C0E8 428 aa10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 LACRTQ9GZZ8 138 aa10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 MYH16Q9H6N6 1097 aa10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 DBF4Q9UBU7 674 aaPredicted RBP10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 GGA1Q9UJY5 639 aa10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 NSFL1CQ9UNZ2 370 aaKnown RBP10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 MAP3K15Q6ZN16 1313 aa10.23□□□□□ -0.77
ECHDC1-212ENST00000461239 ERVV-1B6SEH8 477 aa10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 VSIG8P0DPA2 414 aa10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 ESRRAP11474 423 aaPredicted RBP10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 PPP2R3AQ06190 1150 aa10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 AIMP1Q12904 312 aaKnown RBP10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 SNAP47Q5SQN1 464 aa10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 CLEC4GQ6UXB4 293 aa10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 TRIM42Q8IWZ5 723 aa10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 NLGN2Q8NFZ4 835 aa10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 STK35Q8TDR2 534 aa10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 SYT17Q9BSW7 474 aa10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 SH2B1Q9NRF2 756 aaPredicted RBP10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 GINM1Q9NU53 330 aa10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 UBP1Q9NZI7 540 aa10.22□□□□□ -0.77
ECHDC1-212ENST00000461239 EPHA1P21709 976 aa10.21□□□□□ -0.77
ECHDC1-212ENST00000461239 NME2P22392 152 aa10.21□□□□□ -0.77
ECHDC1-212ENST00000461239 CRKP46108 304 aa10.21□□□□□ -0.77
ECHDC1-212ENST00000461239 SOX9P48436 509 aa10.21□□□□□ -0.77
ECHDC1-212ENST00000461239 NASPP49321 788 aaPredicted RBP10.21□□□□□ -0.77
ECHDC1-212ENST00000461239 RNFT1Q5M7Z0 435 aa10.21□□□□□ -0.77
ECHDC1-212ENST00000461239 CCDC30Q5VVM6 783 aa10.21□□□□□ -0.77
ECHDC1-212ENST00000461239 ZNF34Q8IZ26 560 aa10.21□□□□□ -0.77
ECHDC1-212ENST00000461239 HYPKQ9NX55 129 aa10.21□□□□□ -0.77
ECHDC1-212ENST00000461239 EFR3BQ9Y2G0 817 aa10.21□□□□□ -0.77
ECHDC1-212ENST00000461239 STARD13Q9Y3M8 1113 aa10.21□□□□□ -0.77
ECHDC1-212ENST00000461239 PCDHB5Q9Y5E4 795 aa10.21□□□□□ -0.77
ECHDC1-212ENST00000461239 UBN2Q6ZU65 1347 aa10.21□□□□□ -0.78
ECHDC1-212ENST00000461239 NRXN2Q9P2S2 1712 aa10.21□□□□□ -0.78
ECHDC1-212ENST00000461239 WFS1O76024 890 aa10.2□□□□□ -0.78
ECHDC1-212ENST00000461239 SERPINB2P05120 415 aa10.2□□□□□ -0.78
ECHDC1-212ENST00000461239 GRIK5Q16478 980 aa10.2□□□□□ -0.78
ECHDC1-212ENST00000461239 SLCO4C1Q6ZQN7 724 aa10.2□□□□□ -0.78
ECHDC1-212ENST00000461239 C10orf71Q711Q0 1435 aa10.2□□□□□ -0.78
ECHDC1-212ENST00000461239 CARMIL3Q8ND23 1372 aa10.2□□□□□ -0.78
ECHDC1-212ENST00000461239 NUP98P52948 1817 aa10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 AFDNP55196 1824 aaKnown RBP10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 KIAA1551Q9HCM1 1747 aa10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 ATP10DQ9P241 1426 aa10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 ZBED9Q6R2W3 1325 aa10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 F13A1P00488 732 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms