RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 RARBP10826 455 aa17.54■□□□□ 0.4
SMPD4-216ENST00000461187 LRRFIP1Q32MZ4 808 aaKnown RBP17.54■□□□□ 0.4
SMPD4-216ENST00000461187 C1orf53Q5VUE5 145 aa17.54■□□□□ 0.4
SMPD4-216ENST00000461187 SNRNP48Q6IEG0 339 aaKnown RBP17.54■□□□□ 0.4
SMPD4-216ENST00000461187 OTUD7AQ8TE49 926 aaPredicted RBP17.54■□□□□ 0.4
SMPD4-216ENST00000461187 ZNF287Q9HBT7 754 aa17.54■□□□□ 0.4
SMPD4-216ENST00000461187 XPNPEP3Q9NQH7 507 aa17.54■□□□□ 0.4
SMPD4-216ENST00000461187 MTMR4Q9NYA4 1195 aa17.54■□□□□ 0.4
SMPD4-216ENST00000461187 PHF24Q9UPV7 400 aa17.54■□□□□ 0.4
SMPD4-216ENST00000461187 PLIN4Q96Q06 1357 aa17.53■□□□□ 0.4
SMPD4-216ENST00000461187 DNAJC25-GNG10A0A024R161 153 aa17.53■□□□□ 0.4
SMPD4-216ENST00000461187 ATP2A1O14983 1001 aa17.53■□□□□ 0.4
SMPD4-216ENST00000461187 ERC2O15083 957 aa17.53■□□□□ 0.4
SMPD4-216ENST00000461187 PGK1P00558 417 aa17.53■□□□□ 0.4
SMPD4-216ENST00000461187 PDLIM7Q9NR12 457 aa17.53■□□□□ 0.4
SMPD4-216ENST00000461187 UNC80Q8N2C7 3258 aa17.52■□□□□ 0.4
SMPD4-216ENST00000461187 CUL9Q8IWT3 2517 aa17.52■□□□□ 0.4
SMPD4-216ENST00000461187 TTLL1O95922 423 aa17.52■□□□□ 0.4
SMPD4-216ENST00000461187 AKR1A1P14550 325 aa17.52■□□□□ 0.4
SMPD4-216ENST00000461187 SH3RF1Q7Z6J0 888 aa17.52■□□□□ 0.4
SMPD4-216ENST00000461187 RNF180Q86T96 592 aa17.52■□□□□ 0.4
SMPD4-216ENST00000461187 CPXCR1Q8N123 301 aa17.52■□□□□ 0.4
SMPD4-216ENST00000461187 LRRC47Q8N1G4 583 aaKnown RBP17.52■□□□□ 0.4
SMPD4-216ENST00000461187 MSL3Q8N5Y2 521 aaKnown RBP17.52■□□□□ 0.4
SMPD4-216ENST00000461187 GMCL1P1Q8NEA9 526 aa17.52■□□□□ 0.4
SMPD4-216ENST00000461187 NEDD1Q8NHV4 660 aa17.52■□□□□ 0.4
SMPD4-216ENST00000461187 SLC38A10Q9HBR0 1119 aa17.52■□□□□ 0.4
SMPD4-216ENST00000461187 PRDM5Q9NQX1 630 aaPredicted RBP17.52■□□□□ 0.4
SMPD4-216ENST00000461187 SYNPO2Q9UMS6 1093 aa17.52■□□□□ 0.4
SMPD4-216ENST00000461187 STXBP5LQ9Y2K9 1186 aa17.52■□□□□ 0.4
SMPD4-216ENST00000461187 LRRC37A2A6NM11 1700 aa17.52■□□□□ 0.39
SMPD4-216ENST00000461187 SYNGAP1Q96PV0 1343 aa17.51■□□□□ 0.39
SMPD4-216ENST00000461187 POTEB2H3BUK9 544 aa17.51■□□□□ 0.39
SMPD4-216ENST00000461187 ZBED4O75132 1171 aa17.51■□□□□ 0.39
SMPD4-216ENST00000461187 SNAI1O95863 264 aaPredicted RBP17.51■□□□□ 0.39
SMPD4-216ENST00000461187 ZMYM1Q5SVZ6 1142 aa17.51■□□□□ 0.39
SMPD4-216ENST00000461187 MAMDC4Q6UXC1 1216 aa17.51■□□□□ 0.39
SMPD4-216ENST00000461187 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.51■□□□□ 0.39
SMPD4-216ENST00000461187 KIFC2Q96AC6 838 aa17.51■□□□□ 0.39
SMPD4-216ENST00000461187 LENG1Q96BZ8 264 aaPredicted RBP17.51■□□□□ 0.39
SMPD4-216ENST00000461187 DDX11Q96FC9 970 aa17.51■□□□□ 0.39
SMPD4-216ENST00000461187 FSD1Q9BTV5 496 aa17.51■□□□□ 0.39
SMPD4-216ENST00000461187 NACAP1Q9BZK3 213 aa17.51■□□□□ 0.39
SMPD4-216ENST00000461187 RAVER2Q9HCJ3 691 aaKnown RBP17.51■□□□□ 0.39
SMPD4-216ENST00000461187 FEM1BQ9UK73 627 aa17.51■□□□□ 0.39
SMPD4-216ENST00000461187 CNPY2Q9Y2B0 182 aa17.51■□□□□ 0.39
SMPD4-216ENST00000461187 TRIM43BA6NCK2 446 aa17.5■□□□□ 0.39
SMPD4-216ENST00000461187 ADAMTS4O75173 837 aa17.5■□□□□ 0.39
SMPD4-216ENST00000461187 TSPY3P0CV98 308 aa17.5■□□□□ 0.39
SMPD4-216ENST00000461187 TSPY8P0CW00 308 aa17.5■□□□□ 0.39
SMPD4-216ENST00000461187 SLC4A3P48751 1232 aa17.5■□□□□ 0.39
SMPD4-216ENST00000461187 TLE2Q04725 743 aa17.5■□□□□ 0.39
SMPD4-216ENST00000461187 PDE4BQ07343 736 aa17.5■□□□□ 0.39
SMPD4-216ENST00000461187 PPARAQ07869 468 aa17.5■□□□□ 0.39
SMPD4-216ENST00000461187 FAM109BQ6ICB4 259 aaPredicted RBP17.5■□□□□ 0.39
SMPD4-216ENST00000461187 BADQ92934 168 aa17.5■□□□□ 0.39
SMPD4-216ENST00000461187 TRIM43Q96BQ3 446 aaPredicted RBP17.5■□□□□ 0.39
SMPD4-216ENST00000461187 NAPBQ9H115 298 aa17.5■□□□□ 0.39
SMPD4-216ENST00000461187 MYH6P13533 1939 aa17.5■□□□□ 0.39
SMPD4-216ENST00000461187 SALL3Q9BXA9 1300 aa17.49■□□□□ 0.39
SMPD4-216ENST00000461187 EYSQ5T1H1 3165 aa17.49■□□□□ 0.39
SMPD4-216ENST00000461187 A0A1W2PQ45 241 aaPredicted RBP17.49■□□□□ 0.39
SMPD4-216ENST00000461187 A0A1W2PQY0 241 aa17.49■□□□□ 0.39
SMPD4-216ENST00000461187 FOXP2O15409 715 aa17.49■□□□□ 0.39
SMPD4-216ENST00000461187 MX1P20591 662 aa17.49■□□□□ 0.39
SMPD4-216ENST00000461187 TFAP4Q01664 338 aa17.49■□□□□ 0.39
SMPD4-216ENST00000461187 SHHQ15465 462 aa17.49■□□□□ 0.39
SMPD4-216ENST00000461187 C9orf50Q5SZB4 431 aa17.49■□□□□ 0.39
SMPD4-216ENST00000461187 SLFN13Q68D06 897 aa17.49■□□□□ 0.39
SMPD4-216ENST00000461187 ZNF467Q7Z7K2 595 aaPredicted RBP17.49■□□□□ 0.39
SMPD4-216ENST00000461187 FGD4Q96M96 766 aa17.49■□□□□ 0.39
SMPD4-216ENST00000461187 CTDP1Q9Y5B0 961 aaPredicted RBP17.49■□□□□ 0.39
SMPD4-216ENST00000461187 CDH23Q9H251 3354 aa17.49■□□□□ 0.39
SMPD4-216ENST00000461187 SYNRGQ9UMZ2 1314 aa17.48■□□□□ 0.39
SMPD4-216ENST00000461187 SLC3A2P08195 630 aaKnown RBP17.48■□□□□ 0.39
SMPD4-216ENST00000461187 BMP3P12645 472 aa17.48■□□□□ 0.39
SMPD4-216ENST00000461187 OAZ1P54368 228 aa17.48■□□□□ 0.39
SMPD4-216ENST00000461187 KLHDC9Q8NEP7 349 aa17.48■□□□□ 0.39
SMPD4-216ENST00000461187 CHST13Q8NET6 341 aa17.48■□□□□ 0.39
SMPD4-216ENST00000461187 TSEN34Q9BSV6 310 aaKnown RBP17.48■□□□□ 0.39
SMPD4-216ENST00000461187 FAM184BQ9ULE4 1060 aa17.48■□□□□ 0.39
SMPD4-216ENST00000461187 TACC3Q9Y6A5 838 aa17.48■□□□□ 0.39
SMPD4-216ENST00000461187 CLTBP09497 229 aa17.47■□□□□ 0.39
SMPD4-216ENST00000461187 ITGB8P26012 769 aa17.47■□□□□ 0.39
SMPD4-216ENST00000461187 CCSAPQ6IQ19 270 aaPredicted RBP17.47■□□□□ 0.39
SMPD4-216ENST00000461187 CCDC129Q6ZRS4 1044 aa17.47■□□□□ 0.39
SMPD4-216ENST00000461187 ANKRD35Q8N283 1001 aa17.47■□□□□ 0.39
SMPD4-216ENST00000461187 GUCD1Q96NT3 240 aa17.47■□□□□ 0.39
SMPD4-216ENST00000461187 FBXO40Q9UH90 709 aa17.47■□□□□ 0.39
SMPD4-216ENST00000461187 ZHX1Q9UKY1 873 aaPredicted RBP17.47■□□□□ 0.39
SMPD4-216ENST00000461187 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.47■□□□□ 0.39
SMPD4-216ENST00000461187 GBF1Q92538 1859 aa17.47■□□□□ 0.39
SMPD4-216ENST00000461187 PRUNE2Q8WUY3 3088 aa17.46■□□□□ 0.39
SMPD4-216ENST00000461187 TMEM232C9JQI7 657 aa17.46■□□□□ 0.39
SMPD4-216ENST00000461187 DLL1O00548 723 aa17.46■□□□□ 0.39
SMPD4-216ENST00000461187 ADCY6O43306 1168 aa17.46■□□□□ 0.39
SMPD4-216ENST00000461187 DUSP11O75319 330 aaKnown RBP17.46■□□□□ 0.39
SMPD4-216ENST00000461187 FDX1P10109 184 aa17.46■□□□□ 0.39
SMPD4-216ENST00000461187 STAT2P52630 851 aa17.46■□□□□ 0.39
SMPD4-216ENST00000461187 ACLYP53396 1101 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms