RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 FERMT2Q96AC1 680 aa14.81□□□□□ -0.04
HDAC4-207ENST00000461113 NECAB3Q96P71 396 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-207ENST00000461113 ESYT1Q9BSJ8 1104 aa14.81□□□□□ -0.04
HDAC4-207ENST00000461113 DNAJC18Q9H819 358 aa14.81□□□□□ -0.04
HDAC4-207ENST00000461113 ZBTB21Q9ULJ3 1066 aa14.81□□□□□ -0.04
HDAC4-207ENST00000461113 U3KPZ7 1027 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-207ENST00000461113 SLC15A5A6NIM6 579 aa14.8□□□□□ -0.04
HDAC4-207ENST00000461113 NT5C2P49902 561 aa14.8□□□□□ -0.04
HDAC4-207ENST00000461113 TLE2Q04725 743 aa14.8□□□□□ -0.04
HDAC4-207ENST00000461113 MFSD6Q6ZSS7 791 aa14.8□□□□□ -0.04
HDAC4-207ENST00000461113 NPLOC4Q8TAT6 608 aa14.8□□□□□ -0.04
HDAC4-207ENST00000461113 GTF3C2Q8WUA4 911 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-207ENST00000461113 FEZ1Q99689 392 aa14.8□□□□□ -0.04
HDAC4-207ENST00000461113 PRDM12Q9H4Q4 367 aa14.8□□□□□ -0.04
HDAC4-207ENST00000461113 ANO2Q9NQ90 1003 aa14.8□□□□□ -0.04
HDAC4-207ENST00000461113 ANAPC4Q9UJX5 808 aa14.8□□□□□ -0.04
HDAC4-207ENST00000461113 HCN4Q9Y3Q4 1203 aa14.8□□□□□ -0.04
HDAC4-207ENST00000461113 ARIH1Q9Y4X5 557 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-207ENST00000461113 BDP1A6H8Y1 2624 aa14.79□□□□□ -0.04
HDAC4-207ENST00000461113 C19orf81C9J6K1 198 aa14.79□□□□□ -0.04
HDAC4-207ENST00000461113 CNMDO75829 334 aa14.79□□□□□ -0.04
HDAC4-207ENST00000461113 TSPY3P0CV98 308 aa14.79□□□□□ -0.04
HDAC4-207ENST00000461113 TSPY8P0CW00 308 aa14.79□□□□□ -0.04
HDAC4-207ENST00000461113 CYBAP13498 195 aa14.79□□□□□ -0.04
HDAC4-207ENST00000461113 PTPREP23469 700 aa14.79□□□□□ -0.04
HDAC4-207ENST00000461113 JAG1P78504 1218 aa14.79□□□□□ -0.04
HDAC4-207ENST00000461113 SLC44A5Q8NCS7 719 aa14.79□□□□□ -0.04
HDAC4-207ENST00000461113 SH2D4AQ9H788 454 aa14.79□□□□□ -0.04
HDAC4-207ENST00000461113 ARHGEF10LQ9HCE6 1279 aa14.79□□□□□ -0.04
HDAC4-207ENST00000461113 TACC3Q9Y6A5 838 aa14.79□□□□□ -0.04
HDAC4-207ENST00000461113 ROBO3Q96MS0 1386 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 USP17L10C9JJH3 530 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 RANBP6O60518 1105 aaKnown RBP14.78□□□□□ -0.04
HDAC4-207ENST00000461113 REC8O95072 547 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 HOXC6P09630 235 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 RAG1P15918 1043 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 HAND2P61296 217 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 CCNA1P78396 465 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 FPGSQ05932 587 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 CTDSPL2Q05D32 466 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 TRDNQ13061 729 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 RNF20Q5VTR2 975 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 C1orf53Q5VUE5 145 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 KANSL2Q9H9L4 492 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 RABGAP1Q9Y3P9 1069 aa14.78□□□□□ -0.04
HDAC4-207ENST00000461113 TSPY2A6NKD2 308 aa14.77□□□□□ -0.05
HDAC4-207ENST00000461113 CLTBP09497 229 aa14.77□□□□□ -0.05
HDAC4-207ENST00000461113 AKR1B1P15121 316 aa14.77□□□□□ -0.05
HDAC4-207ENST00000461113 USP14P54578 494 aa14.77□□□□□ -0.05
HDAC4-207ENST00000461113 ADGRE1Q14246 886 aa14.77□□□□□ -0.05
HDAC4-207ENST00000461113 SHROOM1Q2M3G4 852 aaPredicted RBP14.77□□□□□ -0.05
HDAC4-207ENST00000461113 RRP12Q5JTH9 1297 aaKnown RBP14.77□□□□□ -0.05
HDAC4-207ENST00000461113 LRFN3Q9BTN0 628 aa14.77□□□□□ -0.05
HDAC4-207ENST00000461113 CNNM2Q9H8M5 875 aa14.77□□□□□ -0.05
HDAC4-207ENST00000461113 EMILIN3Q9NT22 766 aa14.77□□□□□ -0.05
HDAC4-207ENST00000461113 FOXP2O15409 715 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 ORC4O43929 436 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 PRDM1O75626 825 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 IGHA2P01877 340 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 RASA1P20936 1047 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 IGFBP4P22692 258 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 PBX2P40425 430 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 TFAP4Q01664 338 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 EVX2Q03828 476 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 ICA1Q05084 483 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 GRB14Q14449 540 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 SEPT2Q15019 361 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 LRRC41Q15345 812 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 USP17L2Q6R6M4 530 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 STAG1Q8WVM7 1258 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 ESR2Q92731 530 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 MAP4K1Q92918 833 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 KRT23Q9C075 422 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 IVNS1ABPQ9Y6Y0 642 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 MYH1P12882 1939 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 NAV1Q8NEY1 1877 aa14.76□□□□□ -0.05
HDAC4-207ENST00000461113 GRXCR1A8MXD5 290 aa14.75□□□□□ -0.05
HDAC4-207ENST00000461113 KIAA0355O15063 1070 aa14.75□□□□□ -0.05
HDAC4-207ENST00000461113 PTH1RQ03431 593 aa14.75□□□□□ -0.05
HDAC4-207ENST00000461113 CCDC178Q5BJE1 867 aa14.75□□□□□ -0.05
HDAC4-207ENST00000461113 PBX4Q9BYU1 374 aa14.75□□□□□ -0.05
HDAC4-207ENST00000461113 EPHX3Q9H6B9 360 aa14.75□□□□□ -0.05
HDAC4-207ENST00000461113 RBM8AQ9Y5S9 174 aaKnown RBP14.75□□□□□ -0.05
HDAC4-207ENST00000461113 FOCADQ5VW36 1801 aa14.74□□□□□ -0.05
HDAC4-207ENST00000461113 SEPT4O43236 478 aa14.74□□□□□ -0.05
HDAC4-207ENST00000461113 PQBP1O60828 265 aaKnown RBP14.74□□□□□ -0.05
HDAC4-207ENST00000461113 BMP1P13497 986 aa14.74□□□□□ -0.05
HDAC4-207ENST00000461113 MCCP23508 829 aa14.74□□□□□ -0.05
HDAC4-207ENST00000461113 FAM47AQ5JRC9 791 aa14.74□□□□□ -0.05
HDAC4-207ENST00000461113 PRAMEF19Q5SWL8 479 aa14.74□□□□□ -0.05
HDAC4-207ENST00000461113 RALYLQ86SE5 291 aaKnown RBP14.74□□□□□ -0.05
HDAC4-207ENST00000461113 DPP9Q86TI2 863 aa14.74□□□□□ -0.05
HDAC4-207ENST00000461113 IQCA1Q86XH1 822 aa14.74□□□□□ -0.05
HDAC4-207ENST00000461113 NEDD1Q8NHV4 660 aa14.74□□□□□ -0.05
HDAC4-207ENST00000461113 IL25Q9H293 177 aa14.74□□□□□ -0.05
HDAC4-207ENST00000461113 TMEM39AQ9NV64 488 aa14.74□□□□□ -0.05
HDAC4-207ENST00000461113 FRMPD3Q5JV73 1810 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 USP17L15C9J2P7 530 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 USP17L13C9JLJ4 530 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 USP17L11C9JVI0 530 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms