RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 SNAP25P60880 206 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 IKQ13123 557 aaPredicted RBP16.37■□□□□ 0.21
HDLBP-229ENST00000460826 TMEM132BQ14DG7 1078 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 BTNL9Q6UXG8 535 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 NFXL1Q6ZNB6 911 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 Q6ZUG5 572 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 FAM160B2Q86V87 743 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 RAB11FIP4Q86YS3 637 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 ZNF654Q8IZM8 581 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 STAG2Q8N3U4 1231 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 GPRC5AQ8NFJ5 357 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 CHURC1Q8WUH1 139 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 IL17RAQ96F46 866 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 ERO1AQ96HE7 468 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 UBA5Q9GZZ9 404 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 PORCNQ9H237 461 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 PRR12Q9ULL5 1215 aa16.37■□□□□ 0.21
HDLBP-229ENST00000460826 CCDC69A6NI79 296 aa16.36■□□□□ 0.21
HDLBP-229ENST00000460826 RXRAP19793 462 aa16.36■□□□□ 0.21
HDLBP-229ENST00000460826 PSMC4P43686 418 aa16.36■□□□□ 0.21
HDLBP-229ENST00000460826 GRM4Q14833 912 aa16.36■□□□□ 0.21
HDLBP-229ENST00000460826 GPATCH4Q5T3I0 446 aaKnown RBP16.36■□□□□ 0.21
HDLBP-229ENST00000460826 RUFY3Q7L099 469 aa16.36■□□□□ 0.21
HDLBP-229ENST00000460826 CATIPQ7Z7H3 387 aa16.36■□□□□ 0.21
HDLBP-229ENST00000460826 SGMS1Q86VZ5 419 aa16.36■□□□□ 0.21
HDLBP-229ENST00000460826 MB21D1Q8N884 522 aa16.36■□□□□ 0.21
HDLBP-229ENST00000460826 TRIM47Q96LD4 638 aa16.36■□□□□ 0.21
HDLBP-229ENST00000460826 SLC38A10Q9HBR0 1119 aa16.36■□□□□ 0.21
HDLBP-229ENST00000460826 MAD2L2Q9UI95 211 aa16.36■□□□□ 0.21
HDLBP-229ENST00000460826 ZNF214Q9UL59 606 aaPredicted RBP16.36■□□□□ 0.21
HDLBP-229ENST00000460826 BRPF3Q9ULD4 1205 aa16.36■□□□□ 0.21
HDLBP-229ENST00000460826 PALM3A6NDB9 673 aaPredicted RBP16.35■□□□□ 0.21
HDLBP-229ENST00000460826 PARP1P09874 1014 aaKnown RBP16.35■□□□□ 0.21
HDLBP-229ENST00000460826 PLS1Q14651 629 aa16.35■□□□□ 0.21
HDLBP-229ENST00000460826 SLC35G1Q2M3R5 365 aa16.35■□□□□ 0.21
HDLBP-229ENST00000460826 ASPRV1Q53RT3 343 aa16.35■□□□□ 0.21
HDLBP-229ENST00000460826 SYDE2Q5VT97 1194 aa16.35■□□□□ 0.21
HDLBP-229ENST00000460826 TMTC2Q8N394 836 aa16.35■□□□□ 0.21
HDLBP-229ENST00000460826 NUP133Q8WUM0 1156 aa16.35■□□□□ 0.21
HDLBP-229ENST00000460826 BRF1Q92994 677 aa16.35■□□□□ 0.21
HDLBP-229ENST00000460826 MOV10L1Q9BXT6 1211 aaKnown RBP16.35■□□□□ 0.21
HDLBP-229ENST00000460826 BACH2Q9BYV9 841 aa16.35■□□□□ 0.21
HDLBP-229ENST00000460826 SPATC1LQ9H0A9 340 aa16.35■□□□□ 0.21
HDLBP-229ENST00000460826 EFCC1Q9HA90 598 aa16.35■□□□□ 0.21
HDLBP-229ENST00000460826 CYP46A1Q9Y6A2 500 aa16.35■□□□□ 0.21
HDLBP-229ENST00000460826 ZBED4O75132 1171 aa16.34■□□□□ 0.21
HDLBP-229ENST00000460826 DDAH1O94760 285 aa16.34■□□□□ 0.21
HDLBP-229ENST00000460826 APOBRQ0VD83 1088 aa16.34■□□□□ 0.21
HDLBP-229ENST00000460826 TOB2Q14106 344 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-229ENST00000460826 KIF22Q14807 665 aa16.34■□□□□ 0.21
HDLBP-229ENST00000460826 APOA5Q6Q788 366 aa16.34■□□□□ 0.21
HDLBP-229ENST00000460826 OTOP1Q7RTM1 612 aa16.34■□□□□ 0.21
HDLBP-229ENST00000460826 AGXT2Q9BYV1 514 aa16.34■□□□□ 0.21
HDLBP-229ENST00000460826 C22orf23Q9BZE7 217 aa16.34■□□□□ 0.21
HDLBP-229ENST00000460826 RAVER2Q9HCJ3 691 aaKnown RBP16.34■□□□□ 0.21
HDLBP-229ENST00000460826 KLF18A0A0U1RQI7 1052 aa16.33■□□□□ 0.2
HDLBP-229ENST00000460826 KLRF2D3W0D1 207 aa16.33■□□□□ 0.2
HDLBP-229ENST00000460826 FMNL1O95466 1100 aaPredicted RBP16.33■□□□□ 0.2
HDLBP-229ENST00000460826 TAL1P17542 331 aaPredicted RBP16.33■□□□□ 0.2
HDLBP-229ENST00000460826 FGD1P98174 961 aa16.33■□□□□ 0.2
HDLBP-229ENST00000460826 CCDC174Q6PII3 467 aa16.33■□□□□ 0.2
HDLBP-229ENST00000460826 CTU1Q7Z7A3 348 aaKnown RBP16.33■□□□□ 0.2
HDLBP-229ENST00000460826 NBPF11Q86T75 865 aa16.33■□□□□ 0.2
HDLBP-229ENST00000460826 CCDC144CPQ8IYA2 1237 aa16.33■□□□□ 0.2
HDLBP-229ENST00000460826 CPXCR1Q8N123 301 aa16.33■□□□□ 0.2
HDLBP-229ENST00000460826 KIF2CQ99661 725 aa16.33■□□□□ 0.2
HDLBP-229ENST00000460826 RANBP17Q9H2T7 1088 aaKnown RBP16.33■□□□□ 0.2
HDLBP-229ENST00000460826 TRIM17Q9Y577 477 aa16.33■□□□□ 0.2
HDLBP-229ENST00000460826 SLC12A7Q9Y666 1083 aa16.33■□□□□ 0.2
HDLBP-229ENST00000460826 ZNF536O15090 1300 aa16.33■□□□□ 0.2
HDLBP-229ENST00000460826 ERCC3P19447 782 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 STAT3P40763 770 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 FCGRTP55899 365 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 CCNA1P78396 465 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 COL13A1Q5TAT6 717 aaPredicted RBP16.32■□□□□ 0.2
HDLBP-229ENST00000460826 SNRNP48Q6IEG0 339 aaKnown RBP16.32■□□□□ 0.2
HDLBP-229ENST00000460826 MICU3Q86XE3 530 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 RIOX2Q8IUF8 465 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 ADGRF4Q8IZF3 695 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 FBXL16Q8N461 479 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 AGBL1Q96MI9 1066 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 MAP3K14Q99558 947 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 LARP6Q9BRS8 491 aaKnown RBP16.32■□□□□ 0.2
HDLBP-229ENST00000460826 PDRG1Q9NUG6 133 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 GABRQQ9UN88 632 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 RIPK3Q9Y572 518 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 HTTP42858 3142 aa16.32■□□□□ 0.2
HDLBP-229ENST00000460826 TNPO2O14787 897 aaKnown RBP16.31■□□□□ 0.2
HDLBP-229ENST00000460826 ATP2A1O14983 1001 aa16.31■□□□□ 0.2
HDLBP-229ENST00000460826 PLEKHA8P1O95397 391 aa16.31■□□□□ 0.2
HDLBP-229ENST00000460826 FDX1P10109 184 aa16.31■□□□□ 0.2
HDLBP-229ENST00000460826 MAPK4P31152 587 aa16.31■□□□□ 0.2
HDLBP-229ENST00000460826 SLC4A3P48751 1232 aa16.31■□□□□ 0.2
HDLBP-229ENST00000460826 RBM25P49756 843 aaKnown RBP16.31■□□□□ 0.2
HDLBP-229ENST00000460826 WDR78Q5VTH9 848 aa16.31■□□□□ 0.2
HDLBP-229ENST00000460826 GPR142Q7Z601 462 aa16.31■□□□□ 0.2
HDLBP-229ENST00000460826 SHCBP1Q8NEM2 672 aa16.31■□□□□ 0.2
HDLBP-229ENST00000460826 CTCFLQ8NI51 663 aaPredicted RBP16.31■□□□□ 0.2
HDLBP-229ENST00000460826 TEX13BQ9BXU2 312 aa16.31■□□□□ 0.2
HDLBP-229ENST00000460826 JMJD4Q9H9V9 463 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms