RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 PTCH2Q9Y6C5 1203 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 MEIS3P2A8K0S8 358 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 PAPLNO95428 1278 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 ZNF865P0CJ78 1059 aaPredicted RBP4.13□□□□□ -1.75
HPS3-203ENST00000460822 AFMP43652 599 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 MLECQ14165 292 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 TAF7LQ5H9L4 462 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 MCATQ8IVS2 390 aaKnown RBP4.13□□□□□ -1.75
HPS3-203ENST00000460822 ST13P5Q8NFI4 369 aaPredicted RBP4.13□□□□□ -1.75
HPS3-203ENST00000460822 TMEM40Q8WWA1 233 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 TM9SF2Q99805 663 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 PRDM7Q9NQW5 492 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 ZSWIM5Q9P217 1185 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 CAPN6Q9Y6Q1 641 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 PRR33A8MZF0 331 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 EIF5BO60841 1220 aaKnown RBP4.13□□□□□ -1.75
HPS3-203ENST00000460822 ZYXQ15942 572 aaKnown RBP4.13□□□□□ -1.75
HPS3-203ENST00000460822 LRRFIP1Q32MZ4 808 aaKnown RBP4.13□□□□□ -1.75
HPS3-203ENST00000460822 THAP5Q7Z6K1 395 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 JMYQ8N9B5 988 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 UBE2FQ969M7 185 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 ATP13A1Q9HD20 1204 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 ZMYM5Q9UJ78 669 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 ADAMTS6Q9UKP5 1117 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 KCNH3Q9ULD8 1083 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 CEP131Q9UPN4 1083 aa4.13□□□□□ -1.75
HPS3-203ENST00000460822 PRR36Q9H6K5 1346 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 FAM86C2PA6NEL3 165 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 UPK3BL1B0FP48 263 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 UPK3BL2E5RIL1 263 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 ASMTLO95671 621 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 ACRP10323 421 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 MASP1P48740 699 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 TCEA2Q15560 299 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 KCNMB1Q16558 191 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 OVOS1Q6IE37 1185 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 VHLLQ6RSH7 139 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 EEPD1Q7L9B9 569 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 PIWIL2Q8TC59 973 aaKnown RBP4.12□□□□□ -1.75
HPS3-203ENST00000460822 SYTL4Q96C24 671 aaPredicted RBP4.12□□□□□ -1.75
HPS3-203ENST00000460822 ACSF2Q96CM8 615 aaPredicted RBP4.12□□□□□ -1.75
HPS3-203ENST00000460822 TRIT1Q9H3H1 467 aaKnown RBP4.12□□□□□ -1.75
HPS3-203ENST00000460822 TMX1Q9H3N1 280 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 SEMA3GQ9NS98 782 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 REV1Q9UBZ9 1251 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 CD2APQ9Y5K6 639 aa4.12□□□□□ -1.75
HPS3-203ENST00000460822 CNTNAP4Q9C0A0 1308 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 DNAJA2O60884 412 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 DALRD3Q5D0E6 543 aaKnown RBP4.11□□□□□ -1.75
HPS3-203ENST00000460822 FLAD1Q8NFF5 587 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 STAG1Q8WVM7 1258 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 SLC38A3Q99624 504 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 POLR3GLQ9BT43 218 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 DDX56Q9NY93 547 aaKnown RBP4.11□□□□□ -1.75
HPS3-203ENST00000460822 FAM53CQ9NYF3 392 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 GMIPQ9P107 970 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 KLHL3Q9UH77 587 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 PCDHB10Q9UN67 800 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 SLC12A7Q9Y666 1083 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 DBX1A6NMT0 343 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 FARP2O94887 1054 aaPredicted RBP4.11□□□□□ -1.75
HPS3-203ENST00000460822 PARNO95453 639 aaKnown RBP4.11□□□□□ -1.75
HPS3-203ENST00000460822 TNK2Q07912 1038 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 PKN1Q16512 942 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 PLEKHG6Q3KR16 790 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 TMEM201Q5SNT2 666 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 SPOCD1Q6ZMY3 1216 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 UNC5AQ6ZN44 842 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 TMPRSS7Q7RTY8 843 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 ZSWIM9Q86XI8 627 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 PHACTR4Q8IZ21 702 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 CYB5D2Q8WUJ1 264 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 IRF2BPLQ9H1B7 796 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 GPATCH2Q9NW75 528 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 ST14Q9Y5Y6 855 aa4.11□□□□□ -1.75
HPS3-203ENST00000460822 LTBP3Q9NS15 1303 aa4.1□□□□□ -1.75
HPS3-203ENST00000460822 KRTAP9-7A8MTY7 169 aa4.1□□□□□ -1.75
HPS3-203ENST00000460822 RAC2P15153 192 aa4.1□□□□□ -1.75
HPS3-203ENST00000460822 GBP1P32455 592 aa4.1□□□□□ -1.75
HPS3-203ENST00000460822 C21orf62-AS1Q17RA5 79 aa4.1□□□□□ -1.75
HPS3-203ENST00000460822 TMEM67Q5HYA8 995 aa4.1□□□□□ -1.75
HPS3-203ENST00000460822 NLRC3Q7RTR2 1065 aa4.1□□□□□ -1.75
HPS3-203ENST00000460822 CREG2Q8IUH2 290 aa4.1□□□□□ -1.75
HPS3-203ENST00000460822 TAB3Q8N5C8 712 aaPredicted RBP4.1□□□□□ -1.75
HPS3-203ENST00000460822 ZSWIM2Q8NEG5 633 aa4.1□□□□□ -1.75
HPS3-203ENST00000460822 ZNF669Q96BR6 464 aaPredicted RBP4.1□□□□□ -1.75
HPS3-203ENST00000460822 ATG4CQ96DT6 458 aa4.1□□□□□ -1.75
HPS3-203ENST00000460822 CCDC74BQ96LY2 380 aa4.1□□□□□ -1.75
HPS3-203ENST00000460822 PHAXQ9H814 394 aaKnown RBP4.1□□□□□ -1.75
HPS3-203ENST00000460822 CTNND2Q9UQB3 1225 aa4.1□□□□□ -1.75
HPS3-203ENST00000460822 SLC22A31A6NKX4 558 aa4.09□□□□□ -1.75
HPS3-203ENST00000460822 S100BP04271 92 aaPredicted RBP4.09□□□□□ -1.75
HPS3-203ENST00000460822 VIL1P09327 827 aaKnown RBP4.09□□□□□ -1.75
HPS3-203ENST00000460822 FAM153BP0C7A2 387 aa4.09□□□□□ -1.75
HPS3-203ENST00000460822 NME1P15531 152 aaKnown RBP4.09□□□□□ -1.75
HPS3-203ENST00000460822 TPP2P29144 1249 aaPredicted RBP4.09□□□□□ -1.75
HPS3-203ENST00000460822 NCAPHQ15003 741 aa4.09□□□□□ -1.75
HPS3-203ENST00000460822 SLC10A6Q3KNW5 377 aa4.09□□□□□ -1.75
HPS3-203ENST00000460822 LCE5AQ5TCM9 118 aa4.09□□□□□ -1.75
HPS3-203ENST00000460822 KIAA1211LQ6NV74 962 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms