RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 PLSCR1O15162 318 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 GNPATO15228 680 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 IL6STP40189 918 aaPredicted RBP17.37■□□□□ 0.37
SSR4-206ENST00000460616 DEFB132Q7Z7B7 95 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 TRIM22Q8IYM9 498 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 CNPY4Q8N129 248 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 OR8K1Q8NGG5 319 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 CWC25Q9NXE8 425 aaPredicted RBP17.37■□□□□ 0.37
SSR4-206ENST00000460616 AATFQ9NY61 560 aaKnown RBP eCLIP17.37■□□□□ 0.37
SSR4-206ENST00000460616 TFR2Q9UP52 801 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 SAMM50Q9Y512 469 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 GRIN2DO15399 1336 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 SPAG1Q07617 926 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 EZH2Q15910 746 aaKnown RBP17.37■□□□□ 0.37
SSR4-206ENST00000460616 TTC19Q6DKK2 380 aaPredicted RBP17.37■□□□□ 0.37
SSR4-206ENST00000460616 CCDC70Q6NSX1 233 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 PI16Q6UXB8 463 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 ANKRD18AQ8IVF6 992 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 PRPF38AQ8NAV1 312 aaKnown RBP17.37■□□□□ 0.37
SSR4-206ENST00000460616 SH3GL2Q99962 352 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.37■□□□□ 0.37
SSR4-206ENST00000460616 CEP83Q9Y592 693 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 LIFRP42702 1097 aa17.36■□□□□ 0.37
SSR4-206ENST00000460616 UBXN1Q04323 297 aa17.36■□□□□ 0.37
SSR4-206ENST00000460616 TTF1Q15361 905 aaPredicted RBP17.36■□□□□ 0.37
SSR4-206ENST00000460616 TCP11X2Q5H9J9 407 aa17.36■□□□□ 0.37
SSR4-206ENST00000460616 CCDC82Q8N4S0 544 aa17.36■□□□□ 0.37
SSR4-206ENST00000460616 EHBP1Q8NDI1 1231 aa17.36■□□□□ 0.37
SSR4-206ENST00000460616 AENQ8WTP8 325 aaKnown RBP17.36■□□□□ 0.37
SSR4-206ENST00000460616 HINFPQ9BQA5 517 aa17.36■□□□□ 0.37
SSR4-206ENST00000460616 CAPN7Q9Y6W3 813 aa17.36■□□□□ 0.37
SSR4-206ENST00000460616 BCORQ6W2J9 1755 aa17.36■□□□□ 0.37
SSR4-206ENST00000460616 IFIT3O14879 490 aaKnown RBP17.36■□□□□ 0.37
SSR4-206ENST00000460616 HLFQ16534 295 aa17.36■□□□□ 0.37
SSR4-206ENST00000460616 TSR1Q2NL82 804 aaKnown RBP17.36■□□□□ 0.37
SSR4-206ENST00000460616 IQCEQ6IPM2 695 aa17.36■□□□□ 0.37
SSR4-206ENST00000460616 B4GALNT4Q76KP1 1039 aa17.36■□□□□ 0.37
SSR4-206ENST00000460616 SND1Q7KZF4 910 aaKnown RBP eCLIP17.36■□□□□ 0.376e-15■■■■■ 44.6
SSR4-206ENST00000460616 INCENPQ9NQS7 918 aa17.36■□□□□ 0.37
SSR4-206ENST00000460616 GNL3LQ9NVN8 582 aaKnown RBP17.36■□□□□ 0.37
SSR4-206ENST00000460616 DDX60Q8IY21 1712 aaKnown RBP17.36■□□□□ 0.37
SSR4-206ENST00000460616 ANKRD36CQ5JPF3 1778 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 KCNJ18B7U540 433 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 PDE2AO00408 941 aaPredicted RBP17.35■□□□□ 0.37
SSR4-206ENST00000460616 ZNF185O15231 689 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 KRT86O43790 486 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 OPA1O60313 960 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 HERVK_113P62684 666 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 KRT83P78385 493 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 KCNJ12Q14500 433 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 SLC27A3Q5K4L6 730 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 RRAGBQ5VZM2 374 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 DZIP3Q86Y13 1208 aaKnown RBP17.35■□□□□ 0.37
SSR4-206ENST00000460616 AMOTL1Q8IY63 956 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 OXER1Q8TDS5 423 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 DONSONQ9NYP3 566 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 TTC26A0AVF1 554 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 H0YHG0 523 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 KIAA1328Q86T90 577 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 RPAINQ86UA6 219 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 SYMPKQ92797 1274 aaKnown RBP17.35■□□□□ 0.37
SSR4-206ENST00000460616 CABS1Q96KC9 395 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 RWDD2AQ9UIY3 292 aa17.35■□□□□ 0.37
SSR4-206ENST00000460616 LUC7L2Q9Y383 392 aaKnown RBP17.35■□□□□ 0.37
SSR4-206ENST00000460616 A6NNZ2 444 aa17.34■□□□□ 0.37
SSR4-206ENST00000460616 NDUFAB1O14561 156 aa17.34■□□□□ 0.37
SSR4-206ENST00000460616 C2orf54Q08AI8 447 aa17.34■□□□□ 0.37
SSR4-206ENST00000460616 TUBB8Q3ZCM7 444 aa17.34■□□□□ 0.37
SSR4-206ENST00000460616 OTUD6BQ8N6M0 293 aa17.34■□□□□ 0.37
SSR4-206ENST00000460616 STAMQ92783 540 aa17.34■□□□□ 0.37
SSR4-206ENST00000460616 JADE2Q9NQC1 790 aa17.34■□□□□ 0.37
SSR4-206ENST00000460616 ZSWIM5Q9P217 1185 aa17.34■□□□□ 0.37
SSR4-206ENST00000460616 TRIM75PA6NK02 468 aa17.33■□□□□ 0.37
SSR4-206ENST00000460616 KIAA0754O94854 1291 aa17.33■□□□□ 0.37
SSR4-206ENST00000460616 DEXIO95424 95 aa17.33■□□□□ 0.36
SSR4-206ENST00000460616 KIF6Q6ZMV9 814 aa17.33■□□□□ 0.36
SSR4-206ENST00000460616 CAMKK2Q96RR4 588 aa17.33■□□□□ 0.36
SSR4-206ENST00000460616 JPH2Q9BR39 696 aaPredicted RBP17.33■□□□□ 0.36
SSR4-206ENST00000460616 ADD2P35612 726 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 FNTAP49354 379 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 PAK1Q13153 545 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 CCDC57Q2TAC2 916 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 RC3H1Q5TC82 1133 aaKnown RBP17.32■□□□□ 0.36
SSR4-206ENST00000460616 ZNF662Q6ZS27 426 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 CMTR1Q8N1G2 835 aaKnown RBP17.32■□□□□ 0.36
SSR4-206ENST00000460616 AIDAQ96BJ3 306 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 RRP36Q96EU6 259 aaKnown RBP17.32■□□□□ 0.36
SSR4-206ENST00000460616 DNAJC7Q99615 494 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 SCN7AQ01118 1682 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 MYO1FO00160 1098 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 RPS6KA4O75676 772 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 IDEP14735 1019 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 SKOR1P84550 965 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 RTN1Q16799 776 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 CRACR2BQ8N4Y2 399 aaPredicted RBP17.32■□□□□ 0.36
SSR4-206ENST00000460616 BLZF1Q9H2G9 400 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 SUFUQ9UMX1 484 aa17.32■□□□□ 0.36
SSR4-206ENST00000460616 ANO9A1A5B4 782 aa17.31■□□□□ 0.36
SSR4-206ENST00000460616 CLGNO14967 610 aa17.31■□□□□ 0.36
SSR4-206ENST00000460616 EPB41P11171 864 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms