RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 KCNC2Q96PR1 638 aa5.32□□□□□ -1.56
RFC4-211ENST00000460408 GPR62Q9BZJ7 368 aa5.32□□□□□ -1.56
RFC4-211ENST00000460408 C19orf44Q9H6X5 657 aa5.32□□□□□ -1.56
RFC4-211ENST00000460408 ZNF552Q9H707 407 aaPredicted RBP5.32□□□□□ -1.56
RFC4-211ENST00000460408 CWC22Q9HCG8 908 aaKnown RBP5.32□□□□□ -1.56
RFC4-211ENST00000460408 GMIPQ9P107 970 aa5.32□□□□□ -1.56
RFC4-211ENST00000460408 PPP1R1BQ9UD71 204 aaPredicted RBP5.32□□□□□ -1.56
RFC4-211ENST00000460408 TEX51A0A1B0GUA7 166 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 FITM1A5D6W6 292 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 SLC22A31A6NKX4 558 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 KLF4O43474 513 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 FOXD2O60548 495 aaPredicted RBP5.31□□□□□ -1.56
RFC4-211ENST00000460408 STK10O94804 968 aaKnown RBP5.31□□□□□ -1.56
RFC4-211ENST00000460408 EGR3Q06889 387 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 LRRFIP1Q32MZ4 808 aaKnown RBP5.31□□□□□ -1.56
RFC4-211ENST00000460408 CDCP2Q5VXM1 449 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 ZNF605Q86T29 641 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 TSPYL5Q86VY4 417 aaPredicted RBP5.31□□□□□ -1.56
RFC4-211ENST00000460408 SLFN12Q8IYM2 578 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 TAB3Q8N5C8 712 aaPredicted RBP5.31□□□□□ -1.56
RFC4-211ENST00000460408 CPLX3Q8WVH0 158 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 ANAPC16Q96DE5 110 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 TMEM87BQ96K49 555 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 DNAJC2Q99543 621 aaKnown RBP5.31□□□□□ -1.56
RFC4-211ENST00000460408 DPH2Q9BQC3 489 aaPredicted RBP5.31□□□□□ -1.56
RFC4-211ENST00000460408 GCM1Q9NP62 436 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 GPATCH2Q9NW75 528 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 PRKAG3Q9UGI9 489 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 DUSP13Q9UII6 198 aa5.31□□□□□ -1.56
RFC4-211ENST00000460408 YBX2Q9Y2T7 364 aaKnown RBP5.31□□□□□ -1.56
RFC4-211ENST00000460408 CHURC1-FNTBB4DL54 471 aa5.3□□□□□ -1.56
RFC4-211ENST00000460408 TNFRSF10CO14798 259 aa5.3□□□□□ -1.56
RFC4-211ENST00000460408 ACRP10323 421 aa5.3□□□□□ -1.56
RFC4-211ENST00000460408 NME1P15531 152 aaKnown RBP5.3□□□□□ -1.56
RFC4-211ENST00000460408 NBPF6Q5VWK0 638 aa5.3□□□□□ -1.56
RFC4-211ENST00000460408 FBXW10Q5XX13 1052 aa5.3□□□□□ -1.56
RFC4-211ENST00000460408 RUFY4Q6ZNE9 571 aa5.3□□□□□ -1.56
RFC4-211ENST00000460408 C19orf47Q8N9M1 422 aaKnown RBP5.3□□□□□ -1.56
RFC4-211ENST00000460408 MARCH10Q8NA82 808 aaPredicted RBP5.3□□□□□ -1.56
RFC4-211ENST00000460408 ATG4CQ96DT6 458 aa5.3□□□□□ -1.56
RFC4-211ENST00000460408 INTS4Q96HW7 963 aaKnown RBP5.3□□□□□ -1.56
RFC4-211ENST00000460408 NBPF4Q96M43 638 aa5.3□□□□□ -1.56
RFC4-211ENST00000460408 TM9SF2Q99805 663 aa5.3□□□□□ -1.56
RFC4-211ENST00000460408 HIRIP3Q9BW71 556 aaPredicted RBP5.3□□□□□ -1.56
RFC4-211ENST00000460408 CNNM2Q9H8M5 875 aa5.3□□□□□ -1.56
RFC4-211ENST00000460408 CNOT6Q9ULM6 557 aaKnown RBP5.3□□□□□ -1.56
RFC4-211ENST00000460408 CEP131Q9UPN4 1083 aa5.3□□□□□ -1.56
RFC4-211ENST00000460408 UPK3BL1B0FP48 263 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 UPK3BL2E5RIL1 263 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 SMAD7O15105 426 aaKnown RBP5.29□□□□□ -1.56
RFC4-211ENST00000460408 GUCY2CP25092 1073 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 CASP7P55210 303 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 SERINC3Q13530 473 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 SNX17Q15036 470 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 ZNF385BQ569K4 471 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 TCERG1LQ5VWI1 586 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 INTS3Q68E01 1043 aaKnown RBP5.29□□□□□ -1.56
RFC4-211ENST00000460408 ANKS3Q6ZW76 656 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 NLRC3Q7RTR2 1065 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 PPP1R13LQ8WUF5 828 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 HNRNPLLQ8WVV9 542 aaKnown RBP5.29□□□□□ -1.56
RFC4-211ENST00000460408 CRBNQ96SW2 442 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 KLHL3Q9UH77 587 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 KCTD3Q9Y597 815 aa5.29□□□□□ -1.56
RFC4-211ENST00000460408 SYN1P17600 705 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 RAB33AQ14088 237 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 MLECQ14165 292 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 NFIXQ14938 502 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 TNNI3KQ59H18 835 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 ARSHQ5FYA8 562 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 DBX2Q6ZNG2 339 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 SPPL2CQ8IUH8 684 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 TMEM151BQ8IW70 566 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 CKAP2LQ8IYA6 745 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 DTWD2Q8NBA8 298 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 FAM13CQ8NE31 585 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 SLC9A7Q96T83 725 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 LNPKQ9C0E8 428 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 RTEL1Q9NZ71 1219 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 PCDHA11Q9Y5I1 949 aa5.28□□□□□ -1.56
RFC4-211ENST00000460408 A0A1W2PQH9 124 aa5.27□□□□□ -1.57
RFC4-211ENST00000460408 RFXAPO00287 272 aa5.27□□□□□ -1.57
RFC4-211ENST00000460408 TRIM13O60858 407 aa5.27□□□□□ -1.57
RFC4-211ENST00000460408 YARSP54577 528 aaKnown RBP5.27□□□□□ -1.57
RFC4-211ENST00000460408 CHRNEQ04844 493 aa5.27□□□□□ -1.57
RFC4-211ENST00000460408 ZYXQ15942 572 aaKnown RBP5.27□□□□□ -1.57
RFC4-211ENST00000460408 SOGA3Q5TF21 947 aa5.27□□□□□ -1.57
RFC4-211ENST00000460408 TMEM132EQ6IEE7 984 aa5.27□□□□□ -1.57
RFC4-211ENST00000460408 DPH6Q7L8W6 267 aa5.27□□□□□ -1.57
RFC4-211ENST00000460408 CELF2-AS1Q8N7Q2 184 aa5.27□□□□□ -1.57
RFC4-211ENST00000460408 CXorf38Q8TB03 319 aa5.27□□□□□ -1.57
RFC4-211ENST00000460408 SHISA4Q96DD7 197 aa5.27□□□□□ -1.57
RFC4-211ENST00000460408 KCNH3Q9ULD8 1083 aa5.27□□□□□ -1.57
RFC4-211ENST00000460408 RGS13O14921 159 aa5.26□□□□□ -1.57
RFC4-211ENST00000460408 UBOX5O94941 541 aa5.26□□□□□ -1.57
RFC4-211ENST00000460408 LTKP29376 864 aa5.26□□□□□ -1.57
RFC4-211ENST00000460408 POLR2BP30876 1174 aaKnown RBP5.26□□□□□ -1.57
RFC4-211ENST00000460408 PDE6BP35913 854 aa5.26□□□□□ -1.57
RFC4-211ENST00000460408 CCNFP41002 786 aa5.26□□□□□ -1.57
RFC4-211ENST00000460408 UNC5AQ6ZN44 842 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms