RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 IVNS1ABPQ9Y6Y0 642 aa21.89■■□□□ 1.09
HOXD3-204ENST00000459979 LAMA4Q16363 1823 aa21.89■■□□□ 1.09
HOXD3-204ENST00000459979 RANBP6O60518 1105 aaKnown RBP21.88■■□□□ 1.09
HOXD3-204ENST00000459979 CNGA1P29973 690 aa21.88■■□□□ 1.09
HOXD3-204ENST00000459979 CYP2C19P33261 490 aa21.88■■□□□ 1.09
HOXD3-204ENST00000459979 MDM2Q00987 491 aaPredicted RBP21.88■■□□□ 1.09
HOXD3-204ENST00000459979 GRB14Q14449 540 aa21.88■■□□□ 1.09
HOXD3-204ENST00000459979 TDHQ8IZJ6 230 aa21.88■■□□□ 1.09
HOXD3-204ENST00000459979 RUFY2Q8WXA3 655 aa21.88■■□□□ 1.09
HOXD3-204ENST00000459979 MOV10L1Q9BXT6 1211 aaKnown RBP21.88■■□□□ 1.09
HOXD3-204ENST00000459979 IL25Q9H293 177 aa21.88■■□□□ 1.09
HOXD3-204ENST00000459979 RNF41Q9H4P4 317 aaPredicted RBP21.88■■□□□ 1.09
HOXD3-204ENST00000459979 FBXO28Q9NVF7 368 aa21.88■■□□□ 1.09
HOXD3-204ENST00000459979 ZNFX1Q9P2E3 1918 aaKnown RBP21.88■■□□□ 1.09
HOXD3-204ENST00000459979 COL11A1P12107 1806 aaPredicted RBP21.87■■□□□ 1.09
HOXD3-204ENST00000459979 ZNF236Q9UL36 1845 aa21.87■■□□□ 1.09
HOXD3-204ENST00000459979 ZNF213O14771 459 aa21.87■■□□□ 1.09
HOXD3-204ENST00000459979 HAND2P61296 217 aa21.87■■□□□ 1.09
HOXD3-204ENST00000459979 MFSD6Q6ZSS7 791 aa21.87■■□□□ 1.09
HOXD3-204ENST00000459979 TRPV1Q8NER1 839 aa21.87■■□□□ 1.09
HOXD3-204ENST00000459979 SENP6Q9GZR1 1112 aaPredicted RBP21.87■■□□□ 1.09
HOXD3-204ENST00000459979 DDX20Q9UHI6 824 aaKnown RBP21.87■■□□□ 1.09
HOXD3-204ENST00000459979 CTNNA3Q9UI47 895 aa21.87■■□□□ 1.09
HOXD3-204ENST00000459979 VWA5AO00534 786 aa21.86■■□□□ 1.09
HOXD3-204ENST00000459979 STRNO43815 780 aa21.86■■□□□ 1.09
HOXD3-204ENST00000459979 RAD21O60216 631 aa21.86■■□□□ 1.09
HOXD3-204ENST00000459979 TBC1D10CQ8IV04 446 aa21.86■■□□□ 1.09
HOXD3-204ENST00000459979 LRRC47Q8N1G4 583 aaKnown RBP21.86■■□□□ 1.09
HOXD3-204ENST00000459979 DEFB123Q8N688 67 aa21.86■■□□□ 1.09
HOXD3-204ENST00000459979 PRPF38AQ8NAV1 312 aaKnown RBP21.86■■□□□ 1.09
HOXD3-204ENST00000459979 GMCL1Q96IK5 515 aa21.86■■□□□ 1.09
HOXD3-204ENST00000459979 SLF1Q9BQI6 1058 aa21.86■■□□□ 1.09
HOXD3-204ENST00000459979 MROH8Q9H579 483 aa21.86■■□□□ 1.09
HOXD3-204ENST00000459979 HOXC6P09630 235 aa21.85■■□□□ 1.09
HOXD3-204ENST00000459979 ATN1P54259 1190 aaPredicted RBP21.85■■□□□ 1.09
HOXD3-204ENST00000459979 TMEM132BQ14DG7 1078 aa21.85■■□□□ 1.09
HOXD3-204ENST00000459979 LRIT3Q3SXY7 679 aa21.85■■□□□ 1.09
HOXD3-204ENST00000459979 SLFN13Q68D06 897 aa21.85■■□□□ 1.09
HOXD3-204ENST00000459979 REPS2Q8NFH8 660 aa21.85■■□□□ 1.09
HOXD3-204ENST00000459979 NUP88Q99567 741 aaPredicted RBP21.85■■□□□ 1.09
HOXD3-204ENST00000459979 FEM1BQ9UK73 627 aa21.85■■□□□ 1.09
HOXD3-204ENST00000459979 STX8Q9UNK0 236 aa21.85■■□□□ 1.09
HOXD3-204ENST00000459979 COL6A3P12111 3177 aa21.84■■□□□ 1.09
HOXD3-204ENST00000459979 NMT2O60551 498 aa21.84■■□□□ 1.09
HOXD3-204ENST00000459979 SLC25A27O95847 323 aa21.84■■□□□ 1.09
HOXD3-204ENST00000459979 IMMTQ16891 758 aaKnown RBP21.84■■□□□ 1.09
HOXD3-204ENST00000459979 ANO1Q5XXA6 986 aa21.84■■□□□ 1.09
HOXD3-204ENST00000459979 SAMD1Q6SPF0 538 aaPredicted RBP21.84■■□□□ 1.09
HOXD3-204ENST00000459979 TTC14Q96N46 770 aa21.84■■□□□ 1.09
HOXD3-204ENST00000459979 TOMM22Q9NS69 142 aa21.84■■□□□ 1.09
HOXD3-204ENST00000459979 ZNF214Q9UL59 606 aaPredicted RBP21.84■■□□□ 1.09
HOXD3-204ENST00000459979 LTBP2Q14767 1821 aa21.83■■□□□ 1.09
HOXD3-204ENST00000459979 SGSM2O43147 1006 aa21.83■■□□□ 1.09
HOXD3-204ENST00000459979 PLA2G6O60733 806 aa21.83■■□□□ 1.09
HOXD3-204ENST00000459979 BMP3P12645 472 aa21.83■■□□□ 1.09
HOXD3-204ENST00000459979 ERCC3P19447 782 aa21.83■■□□□ 1.09
HOXD3-204ENST00000459979 ADORA2AP29274 412 aa21.83■■□□□ 1.09
HOXD3-204ENST00000459979 RRP12Q5JTH9 1297 aaKnown RBP21.83■■□□□ 1.09
HOXD3-204ENST00000459979 DPP9Q86TI2 863 aa21.83■■□□□ 1.09
HOXD3-204ENST00000459979 RIOX2Q8IUF8 465 aa21.83■■□□□ 1.09
HOXD3-204ENST00000459979 ABRAQ8N0Z2 381 aa21.83■■□□□ 1.09
HOXD3-204ENST00000459979 ESR2Q92731 530 aa21.83■■□□□ 1.09
HOXD3-204ENST00000459979 ATP2A1O14983 1001 aa21.82■■□□□ 1.08
HOXD3-204ENST00000459979 CYBAP13498 195 aa21.82■■□□□ 1.08
HOXD3-204ENST00000459979 COPB2P35606 906 aa21.82■■□□□ 1.08
HOXD3-204ENST00000459979 PLS1Q14651 629 aa21.82■■□□□ 1.08
HOXD3-204ENST00000459979 GJC2Q5T442 439 aaPredicted RBP21.82■■□□□ 1.08
HOXD3-204ENST00000459979 SMCHD1A6NHR9 2005 aa21.81■■□□□ 1.08
HOXD3-204ENST00000459979 DLL1O00548 723 aa21.81■■□□□ 1.08
HOXD3-204ENST00000459979 COBLO75128 1261 aa21.81■■□□□ 1.08
HOXD3-204ENST00000459979 IGHA2P01877 340 aa21.81■■□□□ 1.08
HOXD3-204ENST00000459979 FDX1P10109 184 aa21.81■■□□□ 1.08
HOXD3-204ENST00000459979 TOP1P11387 765 aaKnown RBP21.81■■□□□ 1.08
HOXD3-204ENST00000459979 STAT3P40763 770 aa21.81■■□□□ 1.08
HOXD3-204ENST00000459979 SLC1A4P43007 532 aa21.81■■□□□ 1.08
HOXD3-204ENST00000459979 BMP2KLQ5H9B9 411 aa21.81■■□□□ 1.08
HOXD3-204ENST00000459979 GPR153Q6NV75 609 aa21.81■■□□□ 1.08
HOXD3-204ENST00000459979 PLXNA1Q9UIW2 1896 aa21.81■■□□□ 1.08
HOXD3-204ENST00000459979 NEDD4P46934 1319 aa21.8■■□□□ 1.08
HOXD3-204ENST00000459979 MSCO60682 206 aa21.8■■□□□ 1.08
HOXD3-204ENST00000459979 RCSD1Q6JBY9 416 aa21.8■■□□□ 1.08
HOXD3-204ENST00000459979 FAM160B2Q86V87 743 aa21.8■■□□□ 1.08
HOXD3-204ENST00000459979 CHURC1Q8WUH1 139 aa21.8■■□□□ 1.08
HOXD3-204ENST00000459979 CCDC136Q96JN2 1154 aa21.8■■□□□ 1.08
HOXD3-204ENST00000459979 TMEM47Q9BQJ4 181 aa21.8■■□□□ 1.08
HOXD3-204ENST00000459979 TEX13BQ9BXU2 312 aa21.8■■□□□ 1.08
HOXD3-204ENST00000459979 SLC38A10Q9HBR0 1119 aa21.8■■□□□ 1.08
HOXD3-204ENST00000459979 DNM1LO00429 736 aa21.79■■□□□ 1.08
HOXD3-204ENST00000459979 ZBED4O75132 1171 aa21.79■■□□□ 1.08
HOXD3-204ENST00000459979 MYCNP04198 464 aaPredicted RBP21.79■■□□□ 1.08
HOXD3-204ENST00000459979 MCCP23508 829 aa21.79■■□□□ 1.08
HOXD3-204ENST00000459979 STAT2P52630 851 aa21.79■■□□□ 1.08
HOXD3-204ENST00000459979 OAZ1P54368 228 aa21.79■■□□□ 1.08
HOXD3-204ENST00000459979 RTP1P59025 263 aa21.79■■□□□ 1.08
HOXD3-204ENST00000459979 CCDC178Q5BJE1 867 aa21.79■■□□□ 1.08
HOXD3-204ENST00000459979 PRAMEF19Q5SWL8 479 aa21.79■■□□□ 1.08
HOXD3-204ENST00000459979 NCAPG2Q86XI2 1143 aa21.79■■□□□ 1.08
HOXD3-204ENST00000459979 DGKHQ86XP1 1220 aa21.79■■□□□ 1.08
HOXD3-204ENST00000459979 DCAF4Q8WV16 495 aa21.79■■□□□ 1.08
HOXD3-204ENST00000459979 ANKS1AQ92625 1134 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms