RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 ZBED4O75132 1171 aa25.51■■□□□ 1.67
SSNA1-202ENST00000459860 CCL5P13501 91 aa25.51■■□□□ 1.67
SSNA1-202ENST00000459860 FLT3LGP49771 235 aa25.51■■□□□ 1.67
SSNA1-202ENST00000459860 FXR1P51114 621 aaKnown RBP eCLIP25.51■■□□□ 1.67
SSNA1-202ENST00000459860 NECTIN1Q15223 517 aa25.51■■□□□ 1.67
SSNA1-202ENST00000459860 IFIT1BQ5T764 474 aaKnown RBP25.51■■□□□ 1.67
SSNA1-202ENST00000459860 KCTD1Q719H9 257 aa25.51■■□□□ 1.67
SSNA1-202ENST00000459860 PLEKHH3Q7Z736 793 aa25.51■■□□□ 1.67
SSNA1-202ENST00000459860 ENAHQ8N8S7 591 aaPredicted RBP25.51■■□□□ 1.67
SSNA1-202ENST00000459860 SOCS4Q8WXH5 440 aa25.51■■□□□ 1.67
SSNA1-202ENST00000459860 ADAMTS5Q9UNA0 930 aa25.51■■□□□ 1.67
SSNA1-202ENST00000459860 GJB1P08034 283 aa25.5■■□□□ 1.67
SSNA1-202ENST00000459860 FDX1P10109 184 aa25.5■■□□□ 1.67
SSNA1-202ENST00000459860 GJA8P48165 433 aa25.5■■□□□ 1.67
SSNA1-202ENST00000459860 STOX1Q6ZVD7 989 aa25.5■■□□□ 1.67
SSNA1-202ENST00000459860 CYB5R4Q7L1T6 521 aa25.5■■□□□ 1.67
SSNA1-202ENST00000459860 GPR142Q7Z601 462 aa25.5■■□□□ 1.67
SSNA1-202ENST00000459860 PNMA1Q8ND90 353 aa25.5■■□□□ 1.67
SSNA1-202ENST00000459860 SHCBP1Q8NEM2 672 aa25.5■■□□□ 1.67
SSNA1-202ENST00000459860 MOV10L1Q9BXT6 1211 aaKnown RBP25.5■■□□□ 1.67
SSNA1-202ENST00000459860 TAF6LQ9Y6J9 622 aa25.5■■□□□ 1.67
SSNA1-202ENST00000459860 SLC25A27O95847 323 aa25.49■■□□□ 1.67
SSNA1-202ENST00000459860 ZKSCAN1P17029 563 aaPredicted RBP25.49■■□□□ 1.67
SSNA1-202ENST00000459860 COPB2P35606 906 aa25.49■■□□□ 1.67
SSNA1-202ENST00000459860 IRF5Q13568 498 aa25.49■■□□□ 1.67
SSNA1-202ENST00000459860 TMEM132BQ14DG7 1078 aa25.49■■□□□ 1.67
SSNA1-202ENST00000459860 ANKS1AQ92625 1134 aa25.49■■□□□ 1.67
SSNA1-202ENST00000459860 NUDT12Q9BQG2 462 aa25.49■■□□□ 1.67
SSNA1-202ENST00000459860 MROH8Q9H579 483 aa25.49■■□□□ 1.67
SSNA1-202ENST00000459860 IFIT3O14879 490 aaKnown RBP25.48■■□□□ 1.67
SSNA1-202ENST00000459860 PLA2G6O60733 806 aa25.48■■□□□ 1.67
SSNA1-202ENST00000459860 PDHBP11177 359 aa25.48■■□□□ 1.67
SSNA1-202ENST00000459860 NCAPG2Q86XI2 1143 aa25.48■■□□□ 1.67
SSNA1-202ENST00000459860 SLAIN1Q8ND83 568 aa25.48■■□□□ 1.67
SSNA1-202ENST00000459860 FRMPD2Q68DX3 1309 aaPredicted RBP25.47■■□□□ 1.67
SSNA1-202ENST00000459860 ERCC3P19447 782 aa25.47■■□□□ 1.67
SSNA1-202ENST00000459860 STAT3P40763 770 aa25.47■■□□□ 1.67
SSNA1-202ENST00000459860 RASGRP2Q7LDG7 609 aa25.47■■□□□ 1.67
SSNA1-202ENST00000459860 MB21D2Q8IYB1 491 aaPredicted RBP25.47■■□□□ 1.67
SSNA1-202ENST00000459860 TEX13BQ9BXU2 312 aa25.47■■□□□ 1.67
SSNA1-202ENST00000459860 RNF208Q9H0X6 261 aa25.47■■□□□ 1.67
SSNA1-202ENST00000459860 ZNF236Q9UL36 1845 aa25.47■■□□□ 1.67
SSNA1-202ENST00000459860 ADCY3O60266 1144 aa25.46■■□□□ 1.67
SSNA1-202ENST00000459860 MCM5P33992 734 aa25.46■■□□□ 1.67
SSNA1-202ENST00000459860 RGS2P41220 211 aa25.46■■□□□ 1.67
SSNA1-202ENST00000459860 KRT32Q14532 448 aa25.46■■□□□ 1.67
SSNA1-202ENST00000459860 WTAPQ15007 396 aa25.46■■□□□ 1.67
SSNA1-202ENST00000459860 GPATCH4Q5T3I0 446 aaKnown RBP25.46■■□□□ 1.67
SSNA1-202ENST00000459860 RIOX2Q8IUF8 465 aa25.46■■□□□ 1.67
SSNA1-202ENST00000459860 REPS2Q8NFH8 660 aa25.46■■□□□ 1.67
SSNA1-202ENST00000459860 SLC38A10Q9HBR0 1119 aa25.46■■□□□ 1.67
SSNA1-202ENST00000459860 GPCPD1Q9NPB8 672 aa25.46■■□□□ 1.67
SSNA1-202ENST00000459860 BIN2Q9UBW5 565 aaPredicted RBP25.46■■□□□ 1.67
SSNA1-202ENST00000459860 ZNF214Q9UL59 606 aaPredicted RBP25.46■■□□□ 1.67
SSNA1-202ENST00000459860 SLC15A5A6NIM6 579 aa25.45■■□□□ 1.66
SSNA1-202ENST00000459860 SNHG28P0DPA3 235 aa25.45■■□□□ 1.66
SSNA1-202ENST00000459860 OAZ1P54368 228 aa25.45■■□□□ 1.66
SSNA1-202ENST00000459860 UBXN2AP68543 259 aa25.45■■□□□ 1.66
SSNA1-202ENST00000459860 ZNF543Q08ER8 600 aa25.45■■□□□ 1.66
SSNA1-202ENST00000459860 SEC23AQ15436 765 aa25.45■■□□□ 1.66
SSNA1-202ENST00000459860 TMEM67Q5HYA8 995 aa25.45■■□□□ 1.66
SSNA1-202ENST00000459860 SNRNP48Q6IEG0 339 aaKnown RBP25.45■■□□□ 1.66
SSNA1-202ENST00000459860 CPXCR1Q8N123 301 aa25.45■■□□□ 1.66
SSNA1-202ENST00000459860 PXYLP1Q8TE99 480 aa25.45■■□□□ 1.66
SSNA1-202ENST00000459860 UNC93B1Q9H1C4 597 aa25.45■■□□□ 1.66
SSNA1-202ENST00000459860 STRNO43815 780 aa25.44■■□□□ 1.66
SSNA1-202ENST00000459860 PTPREP23469 700 aa25.44■■□□□ 1.66
SSNA1-202ENST00000459860 CHST3Q7LGC8 479 aa25.44■■□□□ 1.66
SSNA1-202ENST00000459860 U2AF1L4Q8WU68 220 aaKnown RBP25.44■■□□□ 1.66
SSNA1-202ENST00000459860 MTA3Q9BTC8 594 aa25.44■■□□□ 1.66
SSNA1-202ENST00000459860 GJD2Q9UKL4 321 aa25.44■■□□□ 1.66
SSNA1-202ENST00000459860 PRR12Q9ULL5 1215 aa25.44■■□□□ 1.66
SSNA1-202ENST00000459860 ATP2A1O14983 1001 aa25.43■■□□□ 1.66
SSNA1-202ENST00000459860 EPB41L2O43491 1005 aaKnown RBP25.43■■□□□ 1.66
SSNA1-202ENST00000459860 PRC1O43663 620 aa25.43■■□□□ 1.66
SSNA1-202ENST00000459860 ELNP15502 786 aa25.43■■□□□ 1.66
SSNA1-202ENST00000459860 CYP2B6P20813 491 aa25.43■■□□□ 1.66
SSNA1-202ENST00000459860 SLC4A3P48751 1232 aa25.43■■□□□ 1.66
SSNA1-202ENST00000459860 MAP2K5Q13163 448 aa25.43■■□□□ 1.66
SSNA1-202ENST00000459860 ASPRV1Q53RT3 343 aa25.43■■□□□ 1.66
SSNA1-202ENST00000459860 MORN1Q5T089 497 aa25.43■■□□□ 1.66
SSNA1-202ENST00000459860 SYDE2Q5VT97 1194 aa25.43■■□□□ 1.66
SSNA1-202ENST00000459860 APBA2Q99767 749 aa25.43■■□□□ 1.66
SSNA1-202ENST00000459860 EIF5BO60841 1220 aaKnown RBP25.42■■□□□ 1.66
SSNA1-202ENST00000459860 ANTXR2P58335 489 aa25.42■■□□□ 1.66
SSNA1-202ENST00000459860 GRB14Q14449 540 aa25.42■■□□□ 1.66
SSNA1-202ENST00000459860 BTNL9Q6UXG8 535 aa25.42■■□□□ 1.66
SSNA1-202ENST00000459860 TRMT44Q8IYL2 757 aaKnown RBP25.42■■□□□ 1.66
SSNA1-202ENST00000459860 TMEM87BQ96K49 555 aa25.42■■□□□ 1.66
SSNA1-202ENST00000459860 NEK1Q96PY6 1258 aa25.42■■□□□ 1.66
SSNA1-202ENST00000459860 RAVER2Q9HCJ3 691 aaKnown RBP25.42■■□□□ 1.66
SSNA1-202ENST00000459860 SGPL1O95470 568 aa25.41■■□□□ 1.66
SSNA1-202ENST00000459860 INHAP05111 366 aa25.41■■□□□ 1.66
SSNA1-202ENST00000459860 PARP1P09874 1014 aaKnown RBP25.41■■□□□ 1.66
SSNA1-202ENST00000459860 FCER1AP12319 257 aa25.41■■□□□ 1.66
SSNA1-202ENST00000459860 XRCC5P13010 732 aaKnown RBP25.41■■□□□ 1.66
SSNA1-202ENST00000459860 SLC16A2P36021 539 aa25.41■■□□□ 1.66
SSNA1-202ENST00000459860 KCTD2Q14681 263 aa25.41■■□□□ 1.66
SSNA1-202ENST00000459860 TSGA10IPQ3SY00 556 aa25.41■■□□□ 1.66
SSNA1-202ENST00000459860 TTBK2Q6IQ55 1244 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms