RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 SSH3Q8TE77 659 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 LPIN2Q92539 896 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 ZNF594Q96JF6 807 aaPredicted RBP10.82□□□□□ -0.68
UFD1-205ENST00000459854 COPRSQ9NQ92 184 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 TMOD2Q9NZR1 351 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 FAF1Q9UNN5 650 aaPredicted RBP10.82□□□□□ -0.68
UFD1-205ENST00000459854 CNGA1P29973 690 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 RBM5P52756 815 aaKnown RBP eCLIP10.82□□□□□ -0.68
UFD1-205ENST00000459854 EIF6P56537 245 aaKnown RBP10.82□□□□□ -0.68
UFD1-205ENST00000459854 SLFNL1Q499Z3 407 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 MCMDC2Q4G0Z9 681 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 LGSNQ5TDP6 509 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 WDR78Q5VTH9 848 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 MFSD6Q6ZSS7 791 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 CCDC63Q8NA47 563 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 TUBB6Q9BUF5 446 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 ABCF2Q9UG63 623 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 RTL9Q8NET4 1388 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 PABPN1LA6NDY0 278 aaKnown RBP10.82□□□□□ -0.68
UFD1-205ENST00000459854 POLRMTO00411 1230 aaKnown RBP10.82□□□□□ -0.68
UFD1-205ENST00000459854 SLC10A5Q5PT55 438 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 ISM2Q6H9L7 571 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 UBL4BQ8N7F7 174 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 MSANTD4Q8NCY6 345 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 NBPF9Q3BBW0 867 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 SND1Q7KZF4 910 aaKnown RBP eCLIP10.82□□□□□ -0.68
UFD1-205ENST00000459854 MKNK2Q9HBH9 465 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 BSDC1Q9NW68 430 aaPredicted RBP10.82□□□□□ -0.68
UFD1-205ENST00000459854 PHLPP2Q6ZVD8 1323 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 DLG5Q8TDM6 1919 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 RIMBP2O15034 1052 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 PPIP5K2O43314 1243 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 TFCP2Q12800 502 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 RASIP1Q5U651 963 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 P3H4Q92791 437 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 ATP6V0A2Q9Y487 856 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 LDHCP07864 332 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 PSMC4P43686 418 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 NECAB1Q8N987 351 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 HVCN1Q96D96 273 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 DTNBP1Q96EV8 351 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 TXNDC16Q9P2K2 825 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 SAR1BQ9Y6B6 198 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 HIBADHP31937 336 aaKnown RBP10.81□□□□□ -0.68
UFD1-205ENST00000459854 PDE4BQ07343 736 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 ANKRD20A3Q5VUR7 823 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 ZNF444Q8N0Y2 327 aaPredicted RBP10.81□□□□□ -0.68
UFD1-205ENST00000459854 OGFOD1Q8N543 542 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 TRIM58Q8NG06 486 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 EIF2AQ9BY44 585 aaKnown RBP10.81□□□□□ -0.68
UFD1-205ENST00000459854 UBN2Q6ZU65 1347 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 GRIN3BO60391 1043 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 MGEA5O60502 916 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 RPL13P26373 211 aaKnown RBP10.81□□□□□ -0.68
UFD1-205ENST00000459854 LIG3P49916 1009 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 Q6ZUG5 572 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 CCDC65Q8IXS2 484 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 LEO1Q8WVC0 666 aaPredicted RBP10.81□□□□□ -0.68
UFD1-205ENST00000459854 SEC31BQ9NQW1 1179 aa10.81□□□□□ -0.68
UFD1-205ENST00000459854 I3L4J1 428 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 CUTAO60888 179 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 AFMP43652 599 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 USP5P45974 858 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 WTAPQ15007 396 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 RTN1Q16799 776 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 RILPL1Q5EBL4 403 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 HHATQ5VTY9 493 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 SSX2IPQ9Y2D8 614 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.8□□□□□ -0.68
UFD1-205ENST00000459854 NHSQ6T4R5 1651 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 PNMA6EA0A0J9YXQ4 647 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 ASIC1P78348 528 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 ATP2B2Q01814 1243 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 SEPT2Q15019 361 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 NAA16Q6N069 864 aaPredicted RBP10.8□□□□□ -0.68
UFD1-205ENST00000459854 SDCCAG8Q86SQ7 713 aaPredicted RBP10.8□□□□□ -0.68
UFD1-205ENST00000459854 SYCP3Q8IZU3 236 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 ZNF215Q9UL58 517 aaPredicted RBP10.8□□□□□ -0.68
UFD1-205ENST00000459854 CCDC151A5D8V7 595 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 CHUKO15111 745 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 GSTO1P78417 241 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 CHRNDQ07001 517 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 SCOCQ9UIL1 159 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 PPP1R9AQ9ULJ8 1098 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 BRD1O95696 1058 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 TM4SF1P30408 202 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 DENND2CQ68D51 928 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 DHX32Q7L7V1 743 aaKnown RBP10.8□□□□□ -0.68
UFD1-205ENST00000459854 CCDC144CPQ8IYA2 1237 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 KLHDC4Q8TBB5 520 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 SERPINA10Q9UK55 444 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 DENND2AQ9ULE3 1009 aa10.8□□□□□ -0.68
UFD1-205ENST00000459854 CEP104O60308 925 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 TCP1P17987 556 aaKnown RBP10.79□□□□□ -0.68
UFD1-205ENST00000459854 PLCD1P51178 756 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 A0A0G2JLW4 131 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 CREB3O43889 395 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 MTX1Q13505 466 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 PPP2R5AQ15172 486 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 TERF2Q15554 542 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms