RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 TEX2Q8IWB9 1127 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 CCAR1Q8IX12 1150 aaKnown RBP6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 DIS3L2Q8IYB7 885 aaKnown RBP6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 CMTR1Q8N1G2 835 aaKnown RBP6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 SRBD1Q8N5C6 995 aaKnown RBP6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 PRPF38AQ8NAV1 312 aaKnown RBP6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZNF280CQ8ND82 737 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 KCNG4Q8TDN1 519 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 ANP32BQ92688 251 aaKnown RBP6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 MPHOSPH6Q99547 160 aaKnown RBP6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 RAB34Q9BZG1 259 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 TAF1DQ9H5J8 278 aaPredicted RBP6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 VCPKMTQ9H867 229 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZNF408Q9H9D4 720 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 RRAGCQ9HB90 399 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 SENP2Q9HC62 589 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 HOXC10Q9NYD6 342 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 MAD2L2Q9UI95 211 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 MTMR6Q9Y217 621 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZHX2Q9Y6X8 837 aa6.69□□□□□ -1.34
RNU1-88P-201ENST00000459274 IGKV6D-41A0A0C4DH26 115 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 SHTN1A0MZ66 631 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 SPDYE3A6NKU9 549 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 WDR46O15213 610 aaKnown RBP6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 TRAK2O60296 914 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 FLOT1O75955 427 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 PLEKHA8P1O95397 391 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 CTDNEP1O95476 244 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 FOSP01100 380 aaPredicted RBP6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZNF76P36508 570 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 TRAPPC10P48553 1259 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 UBE2HP62256 183 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 FKBP1BP68106 108 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 MAP3K10Q02779 954 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 CEBPZQ03701 1054 aaKnown RBP6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 SPP2Q13103 211 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 NONOQ15233 471 aaKnown RBP eCLIP6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 NTRK3Q16288 839 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 TPRNQ4KMQ1 711 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 SYDE2Q5VT97 1194 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 PPP1R18Q6NYC8 613 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 FASTKD5Q7L8L6 764 aaKnown RBP6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 LDHDQ86WU2 507 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 ADGRF4Q8IZF3 695 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 BLIDQ8IZY5 108 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 SPICE1Q8N0Z3 855 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 STAG2Q8N3U4 1231 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 RASSF8Q8NHQ8 419 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 TRPM4Q8TD43 1214 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 KIFC2Q96AC6 838 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 PYM1Q9BRP8 204 aaKnown RBP6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 UBA5Q9GZZ9 404 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 KIAA1683Q9H0B3 1180 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 RIOX1Q9H6W3 641 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 PSTPIP2Q9H939 334 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 BARHL2Q9NY43 387 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 FAM13BQ9NYF5 915 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 VPS54Q9P1Q0 977 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 TFIP11Q9UBB9 837 aaKnown RBP6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 TCEAL9Q9UHQ7 104 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 PCDHA4Q9UN74 947 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 MRPL11Q9Y3B7 192 aaKnown RBP6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 PCDHA1Q9Y5I3 950 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 TACC3Q9Y6A5 838 aa6.68□□□□□ -1.34
RNU1-88P-201ENST00000459274 TRIM75PA6NK02 468 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 SMIM22K7EJ46 135 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 LAD1O00515 517 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 SPTLC2O15270 562 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 YEATS4O95619 227 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 NDUFB10O96000 172 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 FDPSP14324 419 aaKnown RBP6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 PTPRAP18433 802 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 ATP2B1P20020 1258 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 OSBPP22059 807 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 U2AF2P26368 475 aaKnown RBP eCLIP6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 BACE1P56817 501 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 IRX3P78415 501 aaPredicted RBP6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 DNM1Q05193 864 aaKnown RBP6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 PPATQ06203 517 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 COG2Q14746 738 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 CDC37Q16543 378 aaPredicted RBP6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 TMEM266Q2M3C6 531 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 FAM83BQ5T0W9 1011 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 OTUD7BQ6GQQ9 843 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 NBPF11Q86T75 865 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 ERO1BQ86YB8 467 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 REXO1Q8N1G1 1221 aaKnown RBP6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 SAMD3Q8N6K7 520 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 KLRG1Q96E93 195 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 CDCA5Q96FF9 252 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 TEPSINQ96N21 525 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 PIGSQ96S52 555 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 SLF1Q9BQI6 1058 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 WDR18Q9BV38 432 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 PHF20Q9BVI0 1012 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 GPBP1L1Q9HC44 474 aaPredicted RBP6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 FAM217BQ9NTX9 383 aaPredicted RBP6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 PNMA3Q9UL41 463 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 KCNJ14Q9UNX9 436 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms