RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 SMCHD1A6NHR9 2005 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 TTC28Q96AY4 2481 aa12.51□□□□□ -0.41
HDLBP-227ENST00000458564 PLXNA1Q9UIW2 1896 aa12.51□□□□□ -0.41
HDLBP-227ENST00000458564 RASA1P20936 1047 aa12.51□□□□□ -0.41
HDLBP-227ENST00000458564 ZNF467Q7Z7K2 595 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-227ENST00000458564 MAFAQ8NHW3 353 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-227ENST00000458564 SLF1Q9BQI6 1058 aa12.51□□□□□ -0.41
HDLBP-227ENST00000458564 NYAP2Q9P242 653 aa12.51□□□□□ -0.41
HDLBP-227ENST00000458564 SYNPO2Q9UMS6 1093 aa12.51□□□□□ -0.41
HDLBP-227ENST00000458564 MOXD2PA6NHM9 499 aa12.5□□□□□ -0.41
HDLBP-227ENST00000458564 NDUFB10O96000 172 aa12.5□□□□□ -0.41
HDLBP-227ENST00000458564 CST5P28325 142 aaPredicted RBP12.5□□□□□ -0.41
HDLBP-227ENST00000458564 CCSAPQ6IQ19 270 aaPredicted RBP12.5□□□□□ -0.41
HDLBP-227ENST00000458564 PRPF38AQ8NAV1 312 aaKnown RBP12.5□□□□□ -0.41
HDLBP-227ENST00000458564 KLHDC9Q8NEP7 349 aa12.5□□□□□ -0.41
HDLBP-227ENST00000458564 NUP133Q8WUM0 1156 aa12.5□□□□□ -0.41
HDLBP-227ENST00000458564 LENG1Q96BZ8 264 aaPredicted RBP12.5□□□□□ -0.41
HDLBP-227ENST00000458564 RNPC3Q96LT9 517 aaKnown RBP12.5□□□□□ -0.41
HDLBP-227ENST00000458564 STRBPQ96SI9 672 aaKnown RBP12.5□□□□□ -0.41
HDLBP-227ENST00000458564 LRRCC1Q9C099 1032 aa12.5□□□□□ -0.41
HDLBP-227ENST00000458564 SYNRGQ9UMZ2 1314 aa12.5□□□□□ -0.41
HDLBP-227ENST00000458564 IGKV6D-41A0A0C4DH26 115 aa12.49□□□□□ -0.41
HDLBP-227ENST00000458564 GSG1L2A8MUP6 293 aa12.49□□□□□ -0.41
HDLBP-227ENST00000458564 F5H6K3 240 aa12.49□□□□□ -0.41
HDLBP-227ENST00000458564 PQBP1O60828 265 aaKnown RBP12.49□□□□□ -0.41
HDLBP-227ENST00000458564 SNAI1O95863 264 aaPredicted RBP12.49□□□□□ -0.41
HDLBP-227ENST00000458564 RAG1P15918 1043 aa12.49□□□□□ -0.41
HDLBP-227ENST00000458564 ACLYP53396 1101 aa12.49□□□□□ -0.41
HDLBP-227ENST00000458564 EPHB4P54760 987 aa12.49□□□□□ -0.41
HDLBP-227ENST00000458564 FPGSQ05932 587 aa12.49□□□□□ -0.41
HDLBP-227ENST00000458564 KLRC3Q07444 240 aa12.49□□□□□ -0.41
HDLBP-227ENST00000458564 FAAP100Q0VG06 881 aa12.49□□□□□ -0.41
HDLBP-227ENST00000458564 SNRNP48Q6IEG0 339 aaKnown RBP12.49□□□□□ -0.41
HDLBP-227ENST00000458564 NUP88Q99567 741 aaPredicted RBP12.49□□□□□ -0.41
HDLBP-227ENST00000458564 STARD7Q9NQZ5 370 aa12.49□□□□□ -0.41
HDLBP-227ENST00000458564 FAM184BQ9ULE4 1060 aa12.49□□□□□ -0.41
HDLBP-227ENST00000458564 RIPK3Q9Y572 518 aa12.49□□□□□ -0.41
HDLBP-227ENST00000458564 PLIN4Q96Q06 1357 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 ELP1O95163 1332 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 MROH7Q68CQ1 1323 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 DCDC2CA8MYV0 355 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 DUSP11O75319 330 aaKnown RBP12.48□□□□□ -0.41
HDLBP-227ENST00000458564 MIER1Q8N108 512 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 KBTBD3Q8NAB2 608 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 MYLIPQ8WY64 445 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 APPBP2Q92624 585 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 MKL1Q969V6 931 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 BCL11AQ9H165 835 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 SLC38A10Q9HBR0 1119 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 ECHDC1Q9NTX5 307 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 TMEM39AQ9NV64 488 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 TBX21Q9UL17 535 aa12.48□□□□□ -0.41
HDLBP-227ENST00000458564 RAD21O60216 631 aa12.47□□□□□ -0.41
HDLBP-227ENST00000458564 FOSL2P15408 326 aa12.47□□□□□ -0.41
HDLBP-227ENST00000458564 OAZ1P54368 228 aa12.47□□□□□ -0.41
HDLBP-227ENST00000458564 KCNA10Q16322 511 aa12.47□□□□□ -0.41
HDLBP-227ENST00000458564 OSBP2Q969R2 916 aa12.47□□□□□ -0.41
HDLBP-227ENST00000458564 DDX11Q96FC9 970 aa12.47□□□□□ -0.41
HDLBP-227ENST00000458564 FGD4Q96M96 766 aa12.47□□□□□ -0.41
HDLBP-227ENST00000458564 UPF3AQ9H1J1 476 aaKnown RBP12.47□□□□□ -0.41
HDLBP-227ENST00000458564 ABHD16BQ9H3Z7 469 aa12.47□□□□□ -0.41
HDLBP-227ENST00000458564 MKNK2Q9HBH9 465 aa12.47□□□□□ -0.41
HDLBP-227ENST00000458564 ZNF287Q9HBT7 754 aa12.47□□□□□ -0.41
HDLBP-227ENST00000458564 EPB41L4AQ9HCS5 686 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-227ENST00000458564 FBXO40Q9UH90 709 aa12.47□□□□□ -0.41
HDLBP-227ENST00000458564 MYADML2A6NDP7 307 aa12.46□□□□□ -0.41
HDLBP-227ENST00000458564 ZBED4O75132 1171 aa12.46□□□□□ -0.41
HDLBP-227ENST00000458564 TIMP1P01033 207 aa12.46□□□□□ -0.41
HDLBP-227ENST00000458564 ZFYP08048 801 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-227ENST00000458564 GNAT2P19087 354 aa12.46□□□□□ -0.41
HDLBP-227ENST00000458564 DNAJB2P25686 324 aa12.46□□□□□ -0.41
HDLBP-227ENST00000458564 CDK7P50613 346 aa12.46□□□□□ -0.41
HDLBP-227ENST00000458564 NKX3-2P78367 333 aa12.46□□□□□ -0.41
HDLBP-227ENST00000458564 ACVR2BQ13705 512 aa12.46□□□□□ -0.41
HDLBP-227ENST00000458564 PCSK9Q8NBP7 692 aaKnown RBP12.46□□□□□ -0.41
HDLBP-227ENST00000458564 GMCL1P1Q8NEA9 526 aa12.46□□□□□ -0.41
HDLBP-227ENST00000458564 CHST13Q8NET6 341 aa12.46□□□□□ -0.41
HDLBP-227ENST00000458564 GLT1D1Q96MS3 346 aa12.46□□□□□ -0.41
HDLBP-227ENST00000458564 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-227ENST00000458564 MTMR4Q9NYA4 1195 aa12.46□□□□□ -0.41
HDLBP-227ENST00000458564 FEM1BQ9UK73 627 aa12.46□□□□□ -0.41
HDLBP-227ENST00000458564 ZHX1Q9UKY1 873 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-227ENST00000458564 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.45□□□□□ -0.42
HDLBP-227ENST00000458564 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.45□□□□□ -0.42
HDLBP-227ENST00000458564 GPAA1O43292 621 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 ADCY6O43306 1168 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 SMARCA5O60264 1052 aaPredicted RBP12.45□□□□□ -0.42
HDLBP-227ENST00000458564 TTLL1O95922 423 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 FDX1P10109 184 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 GJA9P57773 515 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 RASIP1Q5U651 963 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 MFSD5Q6N075 450 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 KIFC2Q96AC6 838 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 CEP95Q96GE4 821 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 GPATCH3Q96I76 525 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 KATNBL1Q9H079 304 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 SPC25Q9HBM1 224 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 CLIP2Q9UDT6 1046 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 CHD9Q3L8U1 2897 aa12.45□□□□□ -0.42
HDLBP-227ENST00000458564 A0A0U1RQG5 324 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms