RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 C10orf71Q711Q0 1435 aa18.92■□□□□ 0.62
CCDC43-202ENST00000457422 F8W031 263 aaPredicted RBP18.91■□□□□ 0.62
CCDC43-202ENST00000457422 GTPBP6O43824 516 aaPredicted RBP18.91■□□□□ 0.62
CCDC43-202ENST00000457422 SRGNP10124 158 aa18.91■□□□□ 0.62
CCDC43-202ENST00000457422 NPR1P16066 1061 aa18.91■□□□□ 0.62
CCDC43-202ENST00000457422 CD44P16070 742 aaKnown RBP18.91■□□□□ 0.62
CCDC43-202ENST00000457422 CDK11BP21127 795 aaKnown RBP18.91■□□□□ 0.62
CCDC43-202ENST00000457422 TXLNAP40222 546 aa18.91■□□□□ 0.62
CCDC43-202ENST00000457422 GABPAQ06546 454 aa18.91■□□□□ 0.62
CCDC43-202ENST00000457422 SAMSN1Q9NSI8 373 aaKnown RBP18.91■□□□□ 0.62
CCDC43-202ENST00000457422 COL11A2P13942 1736 aaPredicted RBP18.91■□□□□ 0.62
CCDC43-202ENST00000457422 SYNRGQ9UMZ2 1314 aa18.91■□□□□ 0.62
CCDC43-202ENST00000457422 PPP1R3GB7ZBB8 358 aa18.91■□□□□ 0.62
CCDC43-202ENST00000457422 PICALMQ13492 652 aa18.91■□□□□ 0.62
CCDC43-202ENST00000457422 USP17L2Q6R6M4 530 aa18.91■□□□□ 0.62
CCDC43-202ENST00000457422 COL23A1Q86Y22 540 aaPredicted RBP18.91■□□□□ 0.62
CCDC43-202ENST00000457422 CERS5Q8N5B7 392 aa18.91■□□□□ 0.62
CCDC43-202ENST00000457422 STAMQ92783 540 aa18.91■□□□□ 0.62
CCDC43-202ENST00000457422 PPP1R13BQ96KQ4 1090 aa18.91■□□□□ 0.62
CCDC43-202ENST00000457422 TUBB4AP04350 444 aa18.9■□□□□ 0.62
CCDC43-202ENST00000457422 PRPHP41219 470 aa18.9■□□□□ 0.62
CCDC43-202ENST00000457422 SYCP1Q15431 976 aa18.9■□□□□ 0.62
CCDC43-202ENST00000457422 ZNF710Q8N1W2 664 aa18.9■□□□□ 0.62
CCDC43-202ENST00000457422 MTRQ99707 1265 aa18.9■□□□□ 0.62
CCDC43-202ENST00000457422 A0A1B0GTH6 734 aa18.89■□□□□ 0.62
CCDC43-202ENST00000457422 CCP110O43303 1012 aa18.89■□□□□ 0.62
CCDC43-202ENST00000457422 NR1I3Q14994 352 aa18.89■□□□□ 0.62
CCDC43-202ENST00000457422 INF2Q27J81 1249 aa18.89■□□□□ 0.62
CCDC43-202ENST00000457422 CDKAL1Q5VV42 579 aa18.89■□□□□ 0.62
CCDC43-202ENST00000457422 SPECC1LQ69YQ0 1117 aa18.89■□□□□ 0.62
CCDC43-202ENST00000457422 DTHD1Q6ZMT9 781 aa18.89■□□□□ 0.62
CCDC43-202ENST00000457422 FCHSD1Q86WN1 690 aa18.89■□□□□ 0.62
CCDC43-202ENST00000457422 MXD3Q9BW11 206 aa18.89■□□□□ 0.62
CCDC43-202ENST00000457422 MYO3BQ8WXR4 1341 aa18.89■□□□□ 0.61
CCDC43-202ENST00000457422 ALDH1B1P30837 517 aa18.89■□□□□ 0.61
CCDC43-202ENST00000457422 KLHL10Q6JEL2 608 aa18.89■□□□□ 0.61
CCDC43-202ENST00000457422 APTXQ7Z2E3 356 aaKnown RBP18.89■□□□□ 0.61
CCDC43-202ENST00000457422 KRT25Q7Z3Z0 450 aa18.89■□□□□ 0.61
CCDC43-202ENST00000457422 SMYD4Q8IYR2 804 aaPredicted RBP18.89■□□□□ 0.61
CCDC43-202ENST00000457422 AKT1S1Q96B36 256 aa18.89■□□□□ 0.61
CCDC43-202ENST00000457422 RRP36Q96EU6 259 aaKnown RBP18.89■□□□□ 0.61
CCDC43-202ENST00000457422 ZC3H12CQ9C0D7 883 aaKnown RBP18.89■□□□□ 0.61
CCDC43-202ENST00000457422 BLZF1Q9H2G9 400 aa18.89■□□□□ 0.61
CCDC43-202ENST00000457422 IGKV6D-41A0A0C4DH26 115 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 ESYT2A0FGR8 921 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 hCG_1984214I3L0E3 225 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 GNA11P29992 359 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 NAPAP54920 295 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 GOLGA8FQ08AF8 430 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 GOLGA8DPQ0D2H9 430 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 DOK7Q18PE1 504 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 HOMER1Q86YM7 354 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 TMEM139Q8IV31 216 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 ZNF713Q8N859 430 aaPredicted RBP18.88■□□□□ 0.61
CCDC43-202ENST00000457422 ZNF592Q92610 1267 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 TMEM60Q9H2L4 133 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 RIOX1Q9H6W3 641 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 DDX4Q9NQI0 724 aaKnown RBP18.88■□□□□ 0.61
CCDC43-202ENST00000457422 DISC1Q9NRI5 854 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 TTF2Q9UNY4 1162 aaKnown RBP18.88■□□□□ 0.61
CCDC43-202ENST00000457422 ADAMTSL1Q8N6G6 1762 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 PLSCR1O15162 318 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 DPP8Q6V1X1 898 aaPredicted RBP18.88■□□□□ 0.61
CCDC43-202ENST00000457422 KIF18AQ8NI77 898 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 CCSER1Q9C0I3 900 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 C6orf50Q9HD87 102 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 RMND1Q9NWS8 449 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 MTMR4Q9NYA4 1195 aa18.88■□□□□ 0.61
CCDC43-202ENST00000457422 SEC63Q9UGP8 760 aaKnown RBP18.88■□□□□ 0.61
CCDC43-202ENST00000457422 GREB1LQ9C091 1923 aaPredicted RBP18.88■□□□□ 0.61
CCDC43-202ENST00000457422 USP17L5A8MUK1 530 aa18.87■□□□□ 0.61
CCDC43-202ENST00000457422 PDE6BP35913 854 aa18.87■□□□□ 0.61
CCDC43-202ENST00000457422 STX17P56962 302 aa18.87■□□□□ 0.61
CCDC43-202ENST00000457422 SWAP70Q9UH65 585 aa18.87■□□□□ 0.61
CCDC43-202ENST00000457422 ARHGAP6O43182 974 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 MYL1P05976 194 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 SNHG28P0DPA3 235 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 PDHBP11177 359 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 AKR1B1P15121 316 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 CDC25AP30304 524 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 STAT6P42226 847 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 SEMA3FQ13275 785 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 ORC2Q13416 577 aaPredicted RBP18.86■□□□□ 0.61
CCDC43-202ENST00000457422 KARSQ15046 597 aaKnown RBP18.86■□□□□ 0.61
CCDC43-202ENST00000457422 ANKRD7Q92527 254 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 CTAGE1Q96RT6 745 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 SMCO2A6NFE2 343 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 SCNN1DP51172 638 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 NONOQ15233 471 aaKnown RBP eCLIP18.86■□□□□ 0.61
CCDC43-202ENST00000457422 ASPRV1Q53RT3 343 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 ZNF658Q5TYW1 1059 aaPredicted RBP18.86■□□□□ 0.61
CCDC43-202ENST00000457422 HHIPL2Q6UWX4 724 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 PIGSQ96S52 555 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 VAT1LQ9HCJ6 419 aa18.86■□□□□ 0.61
CCDC43-202ENST00000457422 RPN1P04843 607 aaKnown RBP18.85■□□□□ 0.61
CCDC43-202ENST00000457422 MMP10P09238 476 aa18.85■□□□□ 0.61
CCDC43-202ENST00000457422 NAALADL2Q58DX5 795 aa18.85■□□□□ 0.61
CCDC43-202ENST00000457422 TC2NQ8N9U0 490 aa18.85■□□□□ 0.61
CCDC43-202ENST00000457422 FLAD1Q8NFF5 587 aa18.85■□□□□ 0.61
CCDC43-202ENST00000457422 AK8Q96MA6 479 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms