RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 KAT2BQ92831 832 aa15.3■□□□□ 0.04
TOP3B-213ENST00000457179 PDGFDQ9GZP0 370 aaPredicted RBP15.3■□□□□ 0.04
TOP3B-213ENST00000457179 TMX4Q9H1E5 349 aaPredicted RBP15.3■□□□□ 0.04
TOP3B-213ENST00000457179 DHX8Q14562 1220 aaKnown RBP15.3■□□□□ 0.04
TOP3B-213ENST00000457179 SGMS1Q86VZ5 419 aa15.3■□□□□ 0.04
TOP3B-213ENST00000457179 SUGP1Q8IWZ8 645 aaKnown RBP15.3■□□□□ 0.04
TOP3B-213ENST00000457179 CTCFLQ8NI51 663 aaPredicted RBP15.3■□□□□ 0.04
TOP3B-213ENST00000457179 TBC1D16Q8TBP0 767 aa15.3■□□□□ 0.04
TOP3B-213ENST00000457179 WDR66Q8TBY9 1149 aa15.3■□□□□ 0.04
TOP3B-213ENST00000457179 GPKOWQ92917 476 aaPredicted RBP eCLIP15.3■□□□□ 0.04
TOP3B-213ENST00000457179 CHRNA5P30532 468 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 VSNL1P62760 191 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 TCP10Q12799 353 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 MTF1Q14872 753 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 PTPAQ15257 358 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 SRGAP1Q7Z6B7 1085 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 TICAM2Q86XR7 235 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 CRACR2BQ8N4Y2 399 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-213ENST00000457179 PCDHB6Q9Y5E3 794 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 POLRMTO00411 1230 aaKnown RBP15.29■□□□□ 0.04
TOP3B-213ENST00000457179 PPFIA4O75335 1185 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 RPS6KA5O75582 802 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 BAG3O95817 575 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 IBSPP21815 317 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-213ENST00000457179 EN1Q05925 392 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-213ENST00000457179 USP49Q70CQ1 688 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 KIAA0825Q8IV33 1275 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 TRMT44Q8IYL2 757 aaKnown RBP15.29■□□□□ 0.04
TOP3B-213ENST00000457179 JMYQ8N9B5 988 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 GDAP1L1Q96MZ0 367 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 KCNH3Q9ULD8 1083 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 L1RE1Q9UN81 338 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 PCDHA5Q9Y5H7 936 aa15.29■□□□□ 0.04
TOP3B-213ENST00000457179 A0A0U1RQJ8 604 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 CBFA2T2O43439 604 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 CUTAO60888 179 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 SPTY2D1Q68D10 685 aaPredicted RBP15.28■□□□□ 0.04
TOP3B-213ENST00000457179 FOXP4Q8IVH2 680 aaPredicted RBP15.28■□□□□ 0.04
TOP3B-213ENST00000457179 VSTM4Q8IW00 320 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 AMOTL1Q8IY63 956 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 RASGRP4Q8TDF6 673 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 ATRIPQ8WXE1 791 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 FANCLQ9NW38 375 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 LEMD3Q9Y2U8 911 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 A0A087WUV0 522 aaPredicted RBP15.28■□□□□ 0.04
TOP3B-213ENST00000457179 CCDC196A0A1B0GTZ2 297 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 FAM196BA6NMK8 535 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 ONECUT3O60422 494 aaPredicted RBP15.28■□□□□ 0.04
TOP3B-213ENST00000457179 RNF40O75150 1001 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 NOSTRINQ8IVI9 506 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 MAP3K14Q99558 947 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 MRPL44Q9H9J2 332 aaKnown RBP15.28■□□□□ 0.04
TOP3B-213ENST00000457179 PPEF1O14829 653 aaPredicted RBP15.28■□□□□ 0.04
TOP3B-213ENST00000457179 POLR2DO15514 142 aaKnown RBP15.28■□□□□ 0.04
TOP3B-213ENST00000457179 CASP1P29466 404 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 SAMD1Q6SPF0 538 aaPredicted RBP15.28■□□□□ 0.04
TOP3B-213ENST00000457179 DPP8Q6V1X1 898 aaPredicted RBP15.28■□□□□ 0.04
TOP3B-213ENST00000457179 METTL16Q86W50 562 aaKnown RBP15.28■□□□□ 0.04
TOP3B-213ENST00000457179 TMEM139Q8IV31 216 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 STAG2Q8N3U4 1231 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 FAM71BQ8TC56 605 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 HSD3B7Q9H2F3 369 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 KAT14Q9H8E8 782 aa15.28■□□□□ 0.04
TOP3B-213ENST00000457179 LRRIQ3A6PVS8 624 aaPredicted RBP15.27■□□□□ 0.04
TOP3B-213ENST00000457179 IFNAR1P17181 557 aa15.27■□□□□ 0.04
TOP3B-213ENST00000457179 CCT5P48643 541 aa15.27■□□□□ 0.04
TOP3B-213ENST00000457179 KIF4BQ2VIQ3 1234 aa15.27■□□□□ 0.04
TOP3B-213ENST00000457179 STAMQ92783 540 aa15.27■□□□□ 0.04
TOP3B-213ENST00000457179 TOB1P50616 345 aaPredicted RBP15.27■□□□□ 0.03
TOP3B-213ENST00000457179 ZNF174Q15697 407 aa15.27■□□□□ 0.03
TOP3B-213ENST00000457179 TMTC2Q8N394 836 aa15.27■□□□□ 0.03
TOP3B-213ENST00000457179 AFAP1L1Q8TED9 768 aa15.27■□□□□ 0.03
TOP3B-213ENST00000457179 RIN2Q8WYP3 895 aaPredicted RBP15.27■□□□□ 0.03
TOP3B-213ENST00000457179 UIMC1Q96RL1 719 aa15.27■□□□□ 0.03
TOP3B-213ENST00000457179 BPIFA3Q9BQP9 254 aa15.27■□□□□ 0.03
TOP3B-213ENST00000457179 DONSONQ9NYP3 566 aa15.27■□□□□ 0.03
TOP3B-213ENST00000457179 TTF2Q9UNY4 1162 aaKnown RBP15.27■□□□□ 0.03
TOP3B-213ENST00000457179 PCDHAC2Q9Y5I4 1007 aa15.27■□□□□ 0.03
TOP3B-213ENST00000457179 BTAF1O14981 1849 aa15.27■□□□□ 0.03
TOP3B-213ENST00000457179 ANKRD36CQ5JPF3 1778 aa15.26■□□□□ 0.03
TOP3B-213ENST00000457179 GOLGA6L9A6NEM1 432 aa15.26■□□□□ 0.03
TOP3B-213ENST00000457179 FMNL1O95466 1100 aaPredicted RBP15.26■□□□□ 0.03
TOP3B-213ENST00000457179 CDC25AP30304 524 aa15.26■□□□□ 0.03
TOP3B-213ENST00000457179 MYL5Q02045 173 aa15.26■□□□□ 0.03
TOP3B-213ENST00000457179 EARS2Q5JPH6 523 aaKnown RBP15.26■□□□□ 0.03
TOP3B-213ENST00000457179 ZSCAN29Q8IWY8 852 aaPredicted RBP15.26■□□□□ 0.03
TOP3B-213ENST00000457179 BRIP1Q9BX63 1249 aa15.26■□□□□ 0.03
TOP3B-213ENST00000457179 SERTAD1Q9UHV2 236 aa15.26■□□□□ 0.03
TOP3B-213ENST00000457179 WDR19Q8NEZ3 1342 aa15.26■□□□□ 0.03
TOP3B-213ENST00000457179 MPHOSPH10O00566 681 aaKnown RBP15.26■□□□□ 0.03
TOP3B-213ENST00000457179 COBLO75128 1261 aa15.26■□□□□ 0.03
TOP3B-213ENST00000457179 NLRP5P59047 1200 aa15.26■□□□□ 0.03
TOP3B-213ENST00000457179 SWT1Q5T5J6 900 aaKnown RBP15.26■□□□□ 0.03
TOP3B-213ENST00000457179 KLHL10Q6JEL2 608 aa15.26■□□□□ 0.03
TOP3B-213ENST00000457179 KRI1Q8N9T8 703 aaKnown RBP15.26■□□□□ 0.03
TOP3B-213ENST00000457179 CEP89Q96ST8 783 aa15.26■□□□□ 0.03
TOP3B-213ENST00000457179 ATRNO75882 1429 aa15.26■□□□□ 0.03
TOP3B-213ENST00000457179 DEXIO95424 95 aa15.25■□□□□ 0.03
TOP3B-213ENST00000457179 MMP1P03956 469 aa15.25■□□□□ 0.03
TOP3B-213ENST00000457179 ADRA2BP18089 450 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms