RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 TCP11Q8WWU5 503 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 CNNM2Q9H8M5 875 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 DACT1Q9NYF0 836 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 ANAPC4Q9UJX5 808 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 QSER1Q2KHR3 1735 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 SALL1Q9NSC2 1324 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 MYH2Q9UKX2 1941 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 KLF18A0A0U1RQI7 1052 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 PRPF6O94906 941 aaKnown RBP8.59□□□□□ -1.03
HDAC9-218ENST00000456174 CTDNEP1O95476 244 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 NPR1P16066 1061 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 TUBB4BP68371 445 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 MCM6Q14566 821 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 DZIP1Q86YF9 867 aaKnown RBP8.59□□□□□ -1.03
HDAC9-218ENST00000456174 NSUN7Q8NE18 718 aaKnown RBP8.59□□□□□ -1.03
HDAC9-218ENST00000456174 TBC1D16Q8TBP0 767 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 CAMKK2Q96RR4 588 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 KRT23Q9C075 422 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 ATP6V0A4Q9HBG4 840 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 NCOA5Q9HCD5 579 aaKnown RBP8.59□□□□□ -1.03
HDAC9-218ENST00000456174 CD209Q9NNX6 404 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 POLLQ9UGP5 575 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 CAPN7Q9Y6W3 813 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 LAMB1P07942 1786 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 MINDY4BA8MYZ0 360 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 C6orf229H3BNL8 230 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 LDHBP07195 334 aaKnown RBP8.58□□□□□ -1.04
HDAC9-218ENST00000456174 ALDH1B1P30837 517 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 GCKP35557 465 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 KRT85P78386 507 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 PPARAQ07869 468 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 PSMD2Q13200 908 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 GNL2Q13823 731 aaKnown RBP8.58□□□□□ -1.04
HDAC9-218ENST00000456174 PDIA5Q14554 519 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 SLC15A2Q16348 729 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 FBXO41Q8TF61 875 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 VIPAS39Q9H9C1 493 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 AATFQ9NY61 560 aaKnown RBP eCLIP8.58□□□□□ -1.04
HDAC9-218ENST00000456174 ANGEL1Q9UNK9 670 aaKnown RBP8.58□□□□□ -1.04
HDAC9-218ENST00000456174 ATP6V0A2Q9Y487 856 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 TACC3Q9Y6A5 838 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 PTPDC1A2A3K4 754 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 GOLGA8BA8MQT2 603 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 SH2B2O14492 632 aaPredicted RBP8.58□□□□□ -1.04
HDAC9-218ENST00000456174 IL1R1P14778 569 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 SFPQP23246 707 aaKnown RBP eCLIP8.58□□□□□ -1.04
HDAC9-218ENST00000456174 CCT5P48643 541 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 PLCB4Q15147 1175 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 STX1AQ16623 288 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 CDC37L1Q7L3B6 337 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 KIAA1328Q86T90 577 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 SPATS2Q86XZ4 545 aaKnown RBP8.58□□□□□ -1.04
HDAC9-218ENST00000456174 STK11IPQ8N1F8 1099 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 PARD3BQ8TEW8 1205 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 TMEM87BQ96K49 555 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 CRNKL1Q9BZJ0 848 aaKnown RBP8.58□□□□□ -1.04
HDAC9-218ENST00000456174 GBP3Q9H0R5 595 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 RNF41Q9H4P4 317 aaPredicted RBP8.58□□□□□ -1.04
HDAC9-218ENST00000456174 KIF9Q9HAQ2 790 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 BATF3Q9NR55 127 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 DUOX1Q9NRD9 1551 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 ZSWIM5Q9P217 1185 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 MYH15Q9Y2K3 1946 aa8.58□□□□□ -1.04
HDAC9-218ENST00000456174 TUBBP07437 444 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 SETSIPP0DME0 302 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 SMTNP53814 917 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 CASP8Q14790 479 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 RRP12Q5JTH9 1297 aaKnown RBP8.57□□□□□ -1.04
HDAC9-218ENST00000456174 C11orf57Q6ZUT1 292 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-218ENST00000456174 FERMT3Q86UX7 667 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 DHX40Q8IX18 779 aaKnown RBP8.57□□□□□ -1.04
HDAC9-218ENST00000456174 RPUSD2Q8IZ73 545 aaKnown RBP8.57□□□□□ -1.04
HDAC9-218ENST00000456174 IGDCC4Q8TDY8 1250 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 MASTLQ96GX5 879 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 MMTAG2Q9BU76 263 aaKnown RBP8.57□□□□□ -1.04
HDAC9-218ENST00000456174 ANKZF1Q9H8Y5 726 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 CHCHD3Q9NX63 227 aaKnown RBP8.57□□□□□ -1.04
HDAC9-218ENST00000456174 STK32BQ9NY57 414 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 HPS5Q9UPZ3 1129 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 CDK5RAP2Q96SN8 1893 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 H3BQV1 296 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 MYO1FO00160 1098 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 RNF40O75150 1001 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 RASSF9O75901 435 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 IMPDH2P12268 514 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 CD151P48509 253 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 GSTO1P78417 241 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 FILIP1LQ4L180 1135 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 TMEM67Q5HYA8 995 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 IFFO2Q5TF58 517 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 RAB11FIP4Q86YS3 637 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 RBM12BQ8IXT5 1001 aaKnown RBP8.57□□□□□ -1.04
HDAC9-218ENST00000456174 FAM177A1Q8N128 213 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-218ENST00000456174 OR8K1Q8NGG5 319 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 KLC4Q9NSK0 619 aa8.57□□□□□ -1.04
HDAC9-218ENST00000456174 CYP2D7A0A087X1C5 515 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 GOLGA6L9A6NEM1 432 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 IFIT3O14879 490 aaKnown RBP8.56□□□□□ -1.04
HDAC9-218ENST00000456174 RIMBP2O15034 1052 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 PPFIA3O75145 1194 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms