RNA–Protein interactions for RNA: ENST00000454619.5

NME4-208, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 5

Gene NME4, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-208ENST00000454619 FAAP100Q0VG06 881 aa17.15■□□□□ 0.34
NME4-208ENST00000454619 UBE3CQ15386 1083 aa17.15■□□□□ 0.34
NME4-208ENST00000454619 RPAP2Q8IXW5 612 aaPredicted RBP17.15■□□□□ 0.34
NME4-208ENST00000454619 REPS2Q8NFH8 660 aa17.15■□□□□ 0.34
NME4-208ENST00000454619 LENG1Q96BZ8 264 aaPredicted RBP17.15■□□□□ 0.34
NME4-208ENST00000454619 TEX13BQ9BXU2 312 aa17.15■□□□□ 0.34
NME4-208ENST00000454619 BOLA2Q9H3K6 86 aa17.15■□□□□ 0.34
NME4-208ENST00000454619 FAM184BQ9ULE4 1060 aa17.15■□□□□ 0.34
NME4-208ENST00000454619 ZBED9Q6R2W3 1325 aa17.15■□□□□ 0.34
NME4-208ENST00000454619 SYNGAP1Q96PV0 1343 aa17.15■□□□□ 0.34
NME4-208ENST00000454619 SYNRGQ9UMZ2 1314 aa17.15■□□□□ 0.34
NME4-208ENST00000454619 MYH7P12883 1935 aa17.14■□□□□ 0.33
NME4-208ENST00000454619 SMIM22K7EJ46 135 aa17.14■□□□□ 0.33
NME4-208ENST00000454619 MS4A1P11836 297 aa17.14■□□□□ 0.33
NME4-208ENST00000454619 ATP5JP18859 108 aa17.14■□□□□ 0.33
NME4-208ENST00000454619 DNAJB2P25686 324 aa17.14■□□□□ 0.33
NME4-208ENST00000454619 SLFNL1Q499Z3 407 aa17.14■□□□□ 0.33
NME4-208ENST00000454619 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
NME4-208ENST00000454619 BCL11AQ9H165 835 aa17.14■□□□□ 0.33
NME4-208ENST00000454619 ARPP21Q9UBL0 812 aaPredicted RBP17.14■□□□□ 0.33
NME4-208ENST00000454619 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
NME4-208ENST00000454619 MROH7Q68CQ1 1323 aa17.14■□□□□ 0.33
NME4-208ENST00000454619 HNRNPUQ00839 825 aaKnown RBP eCLIP17.13■□□□□ 0.335e-8■□□□□ 9.6
NME4-208ENST00000454619 SNRNP48Q6IEG0 339 aaKnown RBP17.13■□□□□ 0.33
NME4-208ENST00000454619 ZSCAN25Q6NSZ9 544 aa17.13■□□□□ 0.33
NME4-208ENST00000454619 CTR9Q6PD62 1173 aa17.13■□□□□ 0.33
NME4-208ENST00000454619 CCDC174Q6PII3 467 aa17.13■□□□□ 0.33
NME4-208ENST00000454619 KLHDC9Q8NEP7 349 aa17.13■□□□□ 0.33
NME4-208ENST00000454619 DDX11Q96FC9 970 aa17.13■□□□□ 0.33
NME4-208ENST00000454619 HAUS7Q99871 368 aa17.13■□□□□ 0.33
NME4-208ENST00000454619 PRDM6Q9NQX0 595 aa17.13■□□□□ 0.33
NME4-208ENST00000454619 ZHX1Q9UKY1 873 aaPredicted RBP17.13■□□□□ 0.33
NME4-208ENST00000454619 GREB1LQ9C091 1923 aaPredicted RBP17.12■□□□□ 0.33
NME4-208ENST00000454619 DUSP11O75319 330 aaKnown RBP17.12■□□□□ 0.33
NME4-208ENST00000454619 TIMP1P01033 207 aa17.12■□□□□ 0.33
NME4-208ENST00000454619 GRIN2CQ14957 1233 aa17.12■□□□□ 0.33
NME4-208ENST00000454619 KCNA10Q16322 511 aa17.12■□□□□ 0.33
NME4-208ENST00000454619 MAMDC4Q6UXC1 1216 aa17.12■□□□□ 0.33
NME4-208ENST00000454619 GLT1D1Q96MS3 346 aa17.12■□□□□ 0.33
NME4-208ENST00000454619 SNAI1O95863 264 aaPredicted RBP17.11■□□□□ 0.33
NME4-208ENST00000454619 CST5P28325 142 aaPredicted RBP17.11■□□□□ 0.33
NME4-208ENST00000454619 PPIGQ13427 754 aaKnown RBP eCLIP17.11■□□□□ 0.338e-9■■□□□ 12.7
NME4-208ENST00000454619 CCSAPQ6IQ19 270 aaPredicted RBP17.11■□□□□ 0.33
NME4-208ENST00000454619 MFSD5Q6N075 450 aa17.11■□□□□ 0.33
NME4-208ENST00000454619 ZNF467Q7Z7K2 595 aaPredicted RBP17.11■□□□□ 0.33
NME4-208ENST00000454619 PCSK9Q8NBP7 692 aaKnown RBP17.11■□□□□ 0.33
NME4-208ENST00000454619 TIFAQ96CG3 184 aa17.11■□□□□ 0.33
NME4-208ENST00000454619 ZNF576Q9H609 170 aa17.11■□□□□ 0.33
NME4-208ENST00000454619 SPC25Q9HBM1 224 aa17.11■□□□□ 0.33
NME4-208ENST00000454619 NYAP2Q9P242 653 aa17.11■□□□□ 0.33
NME4-208ENST00000454619 TBX21Q9UL17 535 aa17.11■□□□□ 0.33
NME4-208ENST00000454619 CTDP1Q9Y5B0 961 aaPredicted RBP17.11■□□□□ 0.33
NME4-208ENST00000454619 ELP1O95163 1332 aa17.11■□□□□ 0.33
NME4-208ENST00000454619 DNAJC25-GNG10A0A024R161 153 aa17.1■□□□□ 0.33
NME4-208ENST00000454619 ATP2A1O14983 1001 aa17.1■□□□□ 0.33
NME4-208ENST00000454619 TJAP1Q5JTD0 557 aa17.1■□□□□ 0.33
NME4-208ENST00000454619 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
NME4-208ENST00000454619 NUP88Q99567 741 aaPredicted RBP17.1■□□□□ 0.33
NME4-208ENST00000454619 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.1■□□□□ 0.332e-7■■■□□ 15.1
NME4-208ENST00000454619 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.1■□□□□ 0.33
NME4-208ENST00000454619 DDX19BQ9UMR2 479 aa17.1■□□□□ 0.33
NME4-208ENST00000454619 TTC28Q96AY4 2481 aa17.09■□□□□ 0.33
NME4-208ENST00000454619 F5H6K3 240 aa17.09■□□□□ 0.33
NME4-208ENST00000454619 ZBED4O75132 1171 aa17.09■□□□□ 0.33
NME4-208ENST00000454619 CHGBP05060 677 aa17.09■□□□□ 0.33
NME4-208ENST00000454619 C6orf222P0C671 652 aaPredicted RBP17.09■□□□□ 0.33
NME4-208ENST00000454619 KLRC3Q07444 240 aa17.09■□□□□ 0.33
NME4-208ENST00000454619 ACVR2BQ13705 512 aa17.09■□□□□ 0.33
NME4-208ENST00000454619 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.09■□□□□ 0.333e-8■■■■■ 32.6
NME4-208ENST00000454619 SIRT2Q8IXJ6 389 aa17.09■□□□□ 0.33
NME4-208ENST00000454619 PUS7LQ9H0K6 701 aaKnown RBP17.09■□□□□ 0.33
NME4-208ENST00000454619 MKNK2Q9HBH9 465 aa17.09■□□□□ 0.33
NME4-208ENST00000454619 FBXO40Q9UH90 709 aa17.09■□□□□ 0.33
NME4-208ENST00000454619 RIPK3Q9Y572 518 aa17.09■□□□□ 0.33
NME4-208ENST00000454619 A0A0U1RQG5 324 aaPredicted RBP17.08■□□□□ 0.32
NME4-208ENST00000454619 MYADML2A6NDP7 307 aa17.08■□□□□ 0.32
NME4-208ENST00000454619 NDUFB10O96000 172 aa17.08■□□□□ 0.32
NME4-208ENST00000454619 RASA1P20936 1047 aa17.08■□□□□ 0.32
NME4-208ENST00000454619 CDK7P50613 346 aa17.08■□□□□ 0.32
NME4-208ENST00000454619 SBK1Q52WX2 424 aa17.08■□□□□ 0.32
NME4-208ENST00000454619 CPXCR1Q8N123 301 aa17.08■□□□□ 0.32
NME4-208ENST00000454619 TMEM199Q8N511 208 aa17.08■□□□□ 0.32
NME4-208ENST00000454619 USP38Q8NB14 1042 aa17.08■□□□□ 0.32
NME4-208ENST00000454619 VTI1AQ96AJ9 217 aa17.08■□□□□ 0.32
NME4-208ENST00000454619 GAS2L1Q99501 681 aaPredicted RBP17.08■□□□□ 0.32
NME4-208ENST00000454619 UPF3AQ9H1J1 476 aaKnown RBP17.08■□□□□ 0.32
NME4-208ENST00000454619 ABHD16BQ9H3Z7 469 aa17.08■□□□□ 0.32
NME4-208ENST00000454619 CHMP4BQ9H444 224 aaKnown RBP17.08■□□□□ 0.32
NME4-208ENST00000454619 ZBTB40Q9NUA8 1239 aa17.08■□□□□ 0.32
NME4-208ENST00000454619 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.08■□□□□ 0.32
NME4-208ENST00000454619 ARVCFO00192 962 aa17.07■□□□□ 0.32
NME4-208ENST00000454619 TLR3O15455 904 aaKnown RBP17.07■□□□□ 0.32
NME4-208ENST00000454619 ASGR1P07306 291 aa17.07■□□□□ 0.32
NME4-208ENST00000454619 SLC4A3P48751 1232 aa17.07■□□□□ 0.32
NME4-208ENST00000454619 GJA9P57773 515 aa17.07■□□□□ 0.32
NME4-208ENST00000454619 TMEM240Q5SV17 173 aa17.07■□□□□ 0.32
NME4-208ENST00000454619 GIMAP6Q6P9H5 292 aa17.07■□□□□ 0.32
NME4-208ENST00000454619 PSRC1Q6PGN9 363 aaPredicted RBP17.07■□□□□ 0.32
NME4-208ENST00000454619 CCDC129Q6ZRS4 1044 aa17.07■□□□□ 0.32
NME4-208ENST00000454619 ANKRD35Q8N283 1001 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms