RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 EIF6P56537 245 aaKnown RBP5.81□□□□□ -1.48
RIF1-207ENST00000454583 SEMA3FQ13275 785 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 SNW1Q13573 536 aaKnown RBP5.81□□□□□ -1.48
RIF1-207ENST00000454583 TTC6Q86TZ1 520 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 HSCBQ8IWL3 235 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 STK11IPQ8N1F8 1099 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 PROCA1Q8NCQ7 364 aaPredicted RBP5.81□□□□□ -1.48
RIF1-207ENST00000454583 FBXO18Q8NFZ0 1043 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 SPATA20Q8TB22 786 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 ESR2Q92731 530 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 CLMNQ96JQ2 1002 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 CSRNP1Q96S65 589 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 RNF41Q9H4P4 317 aaPredicted RBP5.81□□□□□ -1.48
RIF1-207ENST00000454583 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.81□□□□□ -1.48
RIF1-207ENST00000454583 PCDHA6Q9UN73 950 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 PCDHA8Q9Y5H6 950 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 RBM47A0AV96 593 aaKnown RBP5.8□□□□□ -1.48
RIF1-207ENST00000454583 BCRP11274 1271 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 NEK4P51957 841 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 OAZ1P54368 228 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 BACE1P56817 501 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 ANKRD1Q15327 319 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 TTBK2Q6IQ55 1244 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 PNMA8AQ86V59 439 aaPredicted RBP5.8□□□□□ -1.48
RIF1-207ENST00000454583 ADGRF4Q8IZF3 695 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 TMEM63CQ9P1W3 806 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 SPDYE16A6NNV3 312 aaPredicted RBP5.8□□□□□ -1.48
RIF1-207ENST00000454583 TCP10L2B9ZVM9 353 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 F8W031 263 aaPredicted RBP5.8□□□□□ -1.48
RIF1-207ENST00000454583 TRAK2O60296 914 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 VCAM1P19320 739 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 CIITAP33076 1130 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 NECAB1Q8N987 351 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 KANSL2Q9H9L4 492 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 UPF2Q9HAU5 1272 aaKnown RBP5.8□□□□□ -1.48
RIF1-207ENST00000454583 KIF26AQ9ULI4 1882 aaPredicted RBP5.8□□□□□ -1.48
RIF1-207ENST00000454583 PTPDC1A2A3K4 754 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 DDX11L8A8MPP1 907 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 DHX15O43143 795 aaKnown RBP5.8□□□□□ -1.48
RIF1-207ENST00000454583 ZBTB48P10074 688 aaPredicted RBP5.8□□□□□ -1.48
RIF1-207ENST00000454583 E2F4Q16254 413 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 CNNM4Q6P4Q7 775 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 MOB2Q70IA6 237 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 ELOA2Q8IYF1 753 aaPredicted RBP5.8□□□□□ -1.48
RIF1-207ENST00000454583 PNMA1Q8ND90 353 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 OXER1Q8TDS5 423 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 ZKSCAN4Q969J2 545 aaPredicted RBP5.8□□□□□ -1.48
RIF1-207ENST00000454583 ZKSCAN3Q9BRR0 538 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 ZNF341Q9BYN7 854 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 TXNRD2Q9NNW7 524 aa5.8□□□□□ -1.48
RIF1-207ENST00000454583 hCG_1984214I3L0E3 225 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 CTAGE5O15320 804 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 GH2P01242 217 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 HOXC8P31273 242 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 EHHADHQ08426 723 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 ASPRV1Q53RT3 343 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 HYIQ5T013 277 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 GORABQ5T7V8 394 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 RNF20Q5VTR2 975 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 CASC1Q6TDU7 716 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 VPS37DQ86XT2 251 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 TMTC2Q8N394 836 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 ZNF713Q8N859 430 aaPredicted RBP5.79□□□□□ -1.48
RIF1-207ENST00000454583 ETNPPLQ8TBG4 499 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 TMEM174Q8WUU8 243 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 JDP2Q8WYK2 163 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 PGBD1Q96JS3 809 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 MYL10Q9BUA6 226 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 KCNMB3Q9NPA1 279 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 RBM28Q9NW13 759 aaKnown RBP5.79□□□□□ -1.48
RIF1-207ENST00000454583 BTBD7Q9P203 1132 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 OBSL1O75147 1896 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 FNDC1Q4ZHG4 1894 aaPredicted RBP5.79□□□□□ -1.48
RIF1-207ENST00000454583 NUCB2P80303 420 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 PDAP1Q13442 181 aaKnown RBP5.79□□□□□ -1.48
RIF1-207ENST00000454583 CCDC96Q2M329 555 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 CERKLQ49MI3 558 aaPredicted RBP5.79□□□□□ -1.48
RIF1-207ENST00000454583 CCDC178Q5BJE1 867 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 MORN1Q5T089 497 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 SH3RF1Q7Z6J0 888 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 LARP6Q9BRS8 491 aaKnown RBP5.79□□□□□ -1.48
RIF1-207ENST00000454583 SLKQ9H2G2 1235 aaPredicted RBP5.79□□□□□ -1.48
RIF1-207ENST00000454583 RRAGCQ9HB90 399 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 RBPJLQ9UBG7 517 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 RIPK3Q9Y572 518 aa5.79□□□□□ -1.48
RIF1-207ENST00000454583 FAM205CA6NFA0 338 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 F5H6K3 240 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 WDR46O15213 610 aaKnown RBP5.78□□□□□ -1.48
RIF1-207ENST00000454583 GJB2P29033 226 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 KLRC3Q07444 240 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 FSTL1Q12841 308 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 ABCB5Q2M3G0 1257 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 ANKRD23Q86SG2 305 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 SAMD3Q8N6K7 520 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 BRI3BPQ8WY22 251 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 LPAR1Q92633 364 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 HAS1Q92839 578 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 ZIC5Q96T25 663 aa5.78□□□□□ -1.48
RIF1-207ENST00000454583 MMTAG2Q9BU76 263 aaKnown RBP5.78□□□□□ -1.48
RIF1-207ENST00000454583 NACAP1Q9BZK3 213 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms