RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 OSBPL5Q9H0X9 879 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-213ENST00000454468 N4BP2Q86UW6 1770 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-213ENST00000454468 ERICH4A6NGS2 130 aa13.48□□□□□ -0.25
SMPD4-213ENST00000454468 PSMA7O14818 248 aa13.48□□□□□ -0.25
SMPD4-213ENST00000454468 ARHGAP6O43182 974 aa13.48□□□□□ -0.25
SMPD4-213ENST00000454468 ATP2B4P23634 1241 aa13.48□□□□□ -0.25
SMPD4-213ENST00000454468 GNA11P29992 359 aa13.48□□□□□ -0.25
SMPD4-213ENST00000454468 SLC10A5Q5PT55 438 aa13.48□□□□□ -0.25
SMPD4-213ENST00000454468 KIAA1328Q86T90 577 aa13.48□□□□□ -0.25
SMPD4-213ENST00000454468 SPICE1Q8N0Z3 855 aa13.48□□□□□ -0.25
SMPD4-213ENST00000454468 ENOX1Q8TC92 643 aaKnown RBP13.48□□□□□ -0.25
SMPD4-213ENST00000454468 ANAPC4Q9UJX5 808 aa13.48□□□□□ -0.25
SMPD4-213ENST00000454468 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
SMPD4-213ENST00000454468 ORC4O43929 436 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 HLA-DOAP06340 250 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 CCDC175P0C221 793 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 SMAP1Q8IYB5 467 aaPredicted RBP13.47□□□□□ -0.25
SMPD4-213ENST00000454468 CSGALNACT2Q8N6G5 542 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 LRRN4CLQ8ND94 238 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 ACRBPQ8NEB7 543 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 CLSTN1O94985 981 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 RASA1P20936 1047 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 ARID5AQ03989 594 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 LRRC41Q15345 812 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 SKIDA1Q1XH10 827 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 TTBK2Q6IQ55 1244 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 RCSD1Q6JBY9 416 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 DEF6Q9H4E7 631 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 CGNQ9P2M7 1197 aaKnown RBP13.47□□□□□ -0.25
SMPD4-213ENST00000454468 TAF1P21675 1872 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 KCNJ18B7U540 433 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 PPEF1O14829 653 aaPredicted RBP13.47□□□□□ -0.25
SMPD4-213ENST00000454468 PLCG2P16885 1265 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 HSPA1LP34931 641 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 KCNJ12Q14500 433 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 DGKHQ86XP1 1220 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 TBC1D16Q8TBP0 767 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 ARGLU1Q9NWB6 273 aaPredicted RBP13.47□□□□□ -0.25
SMPD4-213ENST00000454468 LRWD1Q9UFC0 647 aa13.47□□□□□ -0.25
SMPD4-213ENST00000454468 SCAF8Q9UPN6 1271 aaKnown RBP13.47□□□□□ -0.25
SMPD4-213ENST00000454468 GDF11O95390 407 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 AKR1B1P15121 316 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 ZNF76P36508 570 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 BPIFA3Q9BQP9 254 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 MMRN2Q9H8L6 949 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 COL1A1P02452 1464 aaPredicted RBP13.46□□□□□ -0.25
SMPD4-213ENST00000454468 MYO5AQ9Y4I1 1855 aaKnown RBP13.46□□□□□ -0.25
SMPD4-213ENST00000454468 MMP10P09238 476 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 GYS1P13807 737 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 PLCG1P19174 1290 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 PRCPP42785 496 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 TMEM266Q2M3C6 531 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 FCHSD1Q86WN1 690 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 CAGE1Q8TC20 777 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 PLEKHG2Q9H7P9 1386 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 ZNHIT6Q9NWK9 470 aaKnown RBP13.46□□□□□ -0.25
SMPD4-213ENST00000454468 RMND1Q9NWS8 449 aa13.46□□□□□ -0.25
SMPD4-213ENST00000454468 POTEMA6NI47 508 aa13.46□□□□□ -0.26
SMPD4-213ENST00000454468 ATP2C1P98194 919 aaPredicted RBP13.46□□□□□ -0.26
SMPD4-213ENST00000454468 CAPZA3Q96KX2 299 aa13.46□□□□□ -0.26
SMPD4-213ENST00000454468 GSDMAQ96QA5 445 aa13.46□□□□□ -0.26
SMPD4-213ENST00000454468 KCNQ5Q9NR82 932 aa13.46□□□□□ -0.26
SMPD4-213ENST00000454468 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.46□□□□□ -0.26
SMPD4-213ENST00000454468 PARP3Q9Y6F1 533 aa13.46□□□□□ -0.26
SMPD4-213ENST00000454468 CYTH3O43739 400 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 RHOXF2BP0C7M4 288 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 TM4SF1P30408 202 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 TXNRD1Q16881 649 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 NELFCDQ8IXH7 590 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 SNX29Q8TEQ0 813 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 CTAGE1Q96RT6 745 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 RHOXF2Q9BQY4 288 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMPD4-213ENST00000454468 CRYBG1Q9Y4K1 1723 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 EPS15P42566 896 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 TBC1D8BQ0IIM8 1120 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 KRT31Q15323 416 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 CALCRLQ16602 461 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 RC3H1Q5TC82 1133 aaKnown RBP13.45□□□□□ -0.26
SMPD4-213ENST00000454468 TMCO3Q6UWJ1 677 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 ERO1AQ96HE7 468 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 WDR24Q96S15 920 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 PCDHA6Q9UN73 950 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 PCDHA8Q9Y5H6 950 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 FLT1P17948 1338 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 GTPBP6O43824 516 aaPredicted RBP13.45□□□□□ -0.26
SMPD4-213ENST00000454468 PCP11498 1178 aaKnown RBP13.45□□□□□ -0.26
SMPD4-213ENST00000454468 FUT2Q10981 343 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 KMT5BQ4FZB7 885 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 NEK8Q86SG6 692 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 ZNF579Q8NAF0 562 aaKnown RBP13.45□□□□□ -0.26
SMPD4-213ENST00000454468 MAD2L2Q9UI95 211 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 TRPC5Q9UL62 973 aaPredicted RBP13.45□□□□□ -0.26
SMPD4-213ENST00000454468 TFR2Q9UP52 801 aa13.45□□□□□ -0.26
SMPD4-213ENST00000454468 ATRNO75882 1429 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 A0A0U1RQJ8 604 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 B4DLN1 442 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 OR52Z1P0C646 297 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 SLC1A4P43007 532 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 KRT27Q7Z3Y8 459 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms