RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ZNF792Q3KQV3 632 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 C20orf194Q5TEA3 1177 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 C12orf60Q5U649 245 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CTR9Q6PD62 1173 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 C16orf59Q7L2K0 433 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 RIOX2Q8IUF8 465 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 MIER1Q8N108 512 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CPXCR1Q8N123 301 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 PPP1R13LQ8WUF5 828 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 KIF1BPQ96EK5 621 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SLF1Q9BQI6 1058 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TINF2Q9BSI4 451 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 RAVER2Q9HCJ3 691 aaKnown RBP7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TMEM39AQ9NV64 488 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 HOXC10Q9NYD6 342 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 UMODL1Q5DID0 1318 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 BRWD1Q9NSI6 2320 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 MINDY4BA8MYZ0 360 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 M0R2C6 588 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 KIAA0355O15063 1070 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CTAGE5O15320 804 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 STRNO43815 780 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SNAI1O95863 264 aaPredicted RBP7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 C6orf222P0C671 652 aaPredicted RBP7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ACRP10323 421 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 AKR1A1P14550 325 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CSF2RAP15509 400 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 RASA1P20936 1047 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 STAT3P40763 770 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ACLYP53396 1101 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SNAP25P60880 206 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SMAD3P84022 425 aaKnown RBP7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 BEX3Q00994 111 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 FAAP100Q0VG06 881 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TMEM63BQ5T3F8 832 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CCSAPQ6IQ19 270 aaPredicted RBP7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 RNF180Q86T96 592 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ABRAQ8N0Z2 381 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 KIFC2Q96AC6 838 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 HAUS7Q99871 368 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TEX13BQ9BXU2 312 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SH2D4AQ9H788 454 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 GOPCQ9HD26 462 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 STARD7Q9NQZ5 370 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TBX21Q9UL17 535 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ADAMTS5Q9UNA0 930 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CNPY2Q9Y2B0 182 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TACC3Q9Y6A5 838 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ASTN1O14525 1302 aa7.2□□□□□ -1.26
HLA-DPA3-207ENST00000454398 PRRC2BQ5JSZ5 2229 aaKnown RBP7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ATP5JP18859 108 aa7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CNTN2Q02246 1040 aa7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 KCNA10Q16322 511 aa7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 MICALL1Q8N3F8 863 aa7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 OTUD7AQ8TE49 926 aaPredicted RBP7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 OSBP2Q969R2 916 aa7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TIFAQ96CG3 184 aa7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CEP95Q96GE4 821 aa7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 NECAB3Q96P71 396 aaPredicted RBP7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 PURBQ96QR8 312 aaKnown RBP7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 KATNBL1Q9H079 304 aa7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 PRDM12Q9H4Q4 367 aa7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 KANSL2Q9H9L4 492 aa7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SLC5A4Q9NY91 659 aa7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CXXC1Q9P0U4 656 aaPredicted RBP7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ARPP21Q9UBL0 812 aaPredicted RBP7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 MTMR7Q9Y216 660 aa7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 COL4A4P53420 1690 aaPredicted RBP7.19□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SCN5AQ14524 2016 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 GSG1L2A8MUP6 293 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 FOXP2O15409 715 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 GPAA1O43292 621 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SLC25A27O95847 323 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CYP2C18P33260 490 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TDO2P48775 406 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 PSMC6P62333 389 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ADGRE1Q14246 886 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CCDC85BQ15834 202 aaPredicted RBP7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CCDC144BQ3MJ40 725 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 HSP90AB4PQ58FF6 505 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 C1orf53Q5VUE5 145 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CXCL17Q6UXB2 119 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CCDC129Q6ZRS4 1044 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ARMCX2Q7L311 632 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 EEPD1Q7L9B9 569 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 FBXO16Q8IX29 292 aaPredicted RBP7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 AMOTL1Q8IY63 956 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CCDC144CPQ8IYA2 1237 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 KLHDC9Q8NEP7 349 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 DDX11Q96FC9 970 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 DDRGK1Q96HY6 314 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CCDC17Q96LX7 622 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SEC62Q99442 399 aaKnown RBP7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 PBX4Q9BYU1 374 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ZNF576Q9H609 170 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ATP8A2Q9NTI2 1148 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms