RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 CHRDL2Q6WN34 429 aa20.22■□□□□ 0.83
TNFRSF4-202ENST00000453580 CCDC129Q6ZRS4 1044 aa20.22■□□□□ 0.83
TNFRSF4-202ENST00000453580 REPS2Q8NFH8 660 aa20.22■□□□□ 0.83
TNFRSF4-202ENST00000453580 EXOC6Q8TAG9 804 aa20.22■□□□□ 0.83
TNFRSF4-202ENST00000453580 DDX11Q96FC9 970 aa20.22■□□□□ 0.83
TNFRSF4-202ENST00000453580 GMCL1Q96IK5 515 aa20.22■□□□□ 0.83
TNFRSF4-202ENST00000453580 STX8Q9UNK0 236 aa20.22■□□□□ 0.83
TNFRSF4-202ENST00000453580 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.22■□□□□ 0.83
TNFRSF4-202ENST00000453580 PLXNA1Q9UIW2 1896 aa20.22■□□□□ 0.83
TNFRSF4-202ENST00000453580 DNM1LO00429 736 aa20.21■□□□□ 0.83
TNFRSF4-202ENST00000453580 RANBP6O60518 1105 aaKnown RBP20.21■□□□□ 0.83
TNFRSF4-202ENST00000453580 COL6A1P12109 1028 aa20.21■□□□□ 0.83
TNFRSF4-202ENST00000453580 SLC1A4P43007 532 aa20.21■□□□□ 0.83
TNFRSF4-202ENST00000453580 KIFC2Q96AC6 838 aa20.21■□□□□ 0.83
TNFRSF4-202ENST00000453580 NUP88Q99567 741 aaPredicted RBP20.21■□□□□ 0.83
TNFRSF4-202ENST00000453580 ISY1Q9ULR0 285 aaKnown RBP20.21■□□□□ 0.83
TNFRSF4-202ENST00000453580 CCDC171Q6TFL3 1326 aa20.21■□□□□ 0.83
TNFRSF4-202ENST00000453580 PLA2G6O60733 806 aa20.2■□□□□ 0.82
TNFRSF4-202ENST00000453580 FGRP09769 529 aa20.2■□□□□ 0.82
TNFRSF4-202ENST00000453580 MNX1P50219 401 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF4-202ENST00000453580 CTDSPL2Q05D32 466 aa20.2■□□□□ 0.82
TNFRSF4-202ENST00000453580 IKQ13123 557 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF4-202ENST00000453580 PLEKHM2Q8IWE5 1019 aa20.2■□□□□ 0.82
TNFRSF4-202ENST00000453580 LRRC47Q8N1G4 583 aaKnown RBP20.2■□□□□ 0.82
TNFRSF4-202ENST00000453580 CHST13Q8NET6 341 aa20.2■□□□□ 0.82
TNFRSF4-202ENST00000453580 RNF41Q9H4P4 317 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF4-202ENST00000453580 SLC38A10Q9HBR0 1119 aa20.2■□□□□ 0.82
TNFRSF4-202ENST00000453580 TOMM22Q9NS69 142 aa20.2■□□□□ 0.82
TNFRSF4-202ENST00000453580 CNPY2Q9Y2B0 182 aa20.2■□□□□ 0.82
TNFRSF4-202ENST00000453580 ALPK3Q96L96 1907 aa20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 A0A0D9SFI3 127 aa20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 KBTBD13C9JR72 458 aa20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 IGHDP01880 384 aa20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 FGAP02671 866 aa20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 HSPD1P10809 573 aaKnown RBP20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 SDSP20132 328 aa20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 NMIQ13287 307 aaPredicted RBP20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 C7orf61Q8IZ16 206 aa20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 CPXCR1Q8N123 301 aa20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 STAG1Q8WVM7 1258 aa20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 FAM227BQ96M60 508 aa20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 TINF2Q9BSI4 451 aa20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 DIAPH3Q9NSV4 1193 aa20.19■□□□□ 0.82
TNFRSF4-202ENST00000453580 TMEM232C9JQI7 657 aa20.18■□□□□ 0.82
TNFRSF4-202ENST00000453580 FOXP2O15409 715 aa20.18■□□□□ 0.82
TNFRSF4-202ENST00000453580 ZNF792Q3KQV3 632 aa20.18■□□□□ 0.82
TNFRSF4-202ENST00000453580 VPS53Q5VIR6 699 aa20.18■□□□□ 0.82
TNFRSF4-202ENST00000453580 RCSD1Q6JBY9 416 aa20.18■□□□□ 0.82
TNFRSF4-202ENST00000453580 MFSD6Q6ZSS7 791 aa20.18■□□□□ 0.82
TNFRSF4-202ENST00000453580 TCP11L1Q9NUJ3 509 aa20.18■□□□□ 0.82
TNFRSF4-202ENST00000453580 SUPT16HQ9Y5B9 1047 aaKnown RBP20.18■□□□□ 0.82
TNFRSF4-202ENST00000453580 TKFCQ3LXA3 575 aa20.17■□□□□ 0.82
TNFRSF4-202ENST00000453580 ZNF467Q7Z7K2 595 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF4-202ENST00000453580 ANKRD35Q8N283 1001 aa20.17■□□□□ 0.82
TNFRSF4-202ENST00000453580 SENP6Q9GZR1 1112 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF4-202ENST00000453580 PNMA2Q9UL42 364 aa20.17■□□□□ 0.82
TNFRSF4-202ENST00000453580 PFASO15067 1338 aa20.17■□□□□ 0.82
TNFRSF4-202ENST00000453580 PGK2P07205 417 aa20.16■□□□□ 0.82
TNFRSF4-202ENST00000453580 RARBP10826 455 aa20.16■□□□□ 0.82
TNFRSF4-202ENST00000453580 CCDC178Q5BJE1 867 aa20.16■□□□□ 0.82
TNFRSF4-202ENST00000453580 TRPV1Q8NER1 839 aa20.16■□□□□ 0.82
TNFRSF4-202ENST00000453580 DCAF4Q8WV16 495 aa20.16■□□□□ 0.82
TNFRSF4-202ENST00000453580 TTC14Q96N46 770 aa20.16■□□□□ 0.82
TNFRSF4-202ENST00000453580 RBM27Q9P2N5 1060 aaKnown RBP20.16■□□□□ 0.82
TNFRSF4-202ENST00000453580 SYNGAP1Q96PV0 1343 aa20.16■□□□□ 0.82
TNFRSF4-202ENST00000453580 TOP1P11387 765 aaKnown RBP20.15■□□□□ 0.82
TNFRSF4-202ENST00000453580 AKR1A1P14550 325 aa20.15■□□□□ 0.82
TNFRSF4-202ENST00000453580 MCCP23508 829 aa20.15■□□□□ 0.82
TNFRSF4-202ENST00000453580 BMP8BP34820 402 aa20.15■□□□□ 0.82
TNFRSF4-202ENST00000453580 NOVP48745 357 aa20.15■□□□□ 0.82
TNFRSF4-202ENST00000453580 SLC4A3P48751 1232 aa20.15■□□□□ 0.82
TNFRSF4-202ENST00000453580 FXR1P51114 621 aaKnown RBP eCLIP20.15■□□□□ 0.82
TNFRSF4-202ENST00000453580 AKNAD1Q5T1N1 836 aa20.15■□□□□ 0.82
TNFRSF4-202ENST00000453580 RAVER2Q9HCJ3 691 aaKnown RBP20.15■□□□□ 0.82
TNFRSF4-202ENST00000453580 IL17RBQ9NRM6 502 aa20.15■□□□□ 0.82
TNFRSF4-202ENST00000453580 CTNNA3Q9UI47 895 aa20.15■□□□□ 0.82
TNFRSF4-202ENST00000453580 ZNF213O14771 459 aa20.14■□□□□ 0.81
TNFRSF4-202ENST00000453580 RRP12Q5JTH9 1297 aaKnown RBP20.14■□□□□ 0.81
TNFRSF4-202ENST00000453580 MAMDC4Q6UXC1 1216 aa20.14■□□□□ 0.81
TNFRSF4-202ENST00000453580 RNF180Q86T96 592 aa20.14■□□□□ 0.81
TNFRSF4-202ENST00000453580 ESR2Q92731 530 aa20.14■□□□□ 0.81
TNFRSF4-202ENST00000453580 PRO3102Q9H379 93 aa20.14■□□□□ 0.81
TNFRSF4-202ENST00000453580 ACAD9Q9H845 621 aa20.14■□□□□ 0.81
TNFRSF4-202ENST00000453580 PRKAG2Q9UGJ0 569 aa20.14■□□□□ 0.81
TNFRSF4-202ENST00000453580 DNAJC25-GNG10A0A024R161 153 aa20.13■□□□□ 0.81
TNFRSF4-202ENST00000453580 CWC27Q6UX04 472 aaKnown RBP20.13■□□□□ 0.81
TNFRSF4-202ENST00000453580 ZNF589Q86UQ0 364 aaPredicted RBP20.13■□□□□ 0.81
TNFRSF4-202ENST00000453580 RIPK3Q9Y572 518 aa20.13■□□□□ 0.81
TNFRSF4-202ENST00000453580 CCDC96Q2M329 555 aa20.12■□□□□ 0.81
TNFRSF4-202ENST00000453580 PRAMEF19Q5SWL8 479 aa20.12■□□□□ 0.81
TNFRSF4-202ENST00000453580 GJC2Q5T442 439 aaPredicted RBP20.12■□□□□ 0.81
TNFRSF4-202ENST00000453580 DSCC1Q9BVC3 393 aa20.12■□□□□ 0.81
TNFRSF4-202ENST00000453580 XPNPEP3Q9NQH7 507 aa20.12■□□□□ 0.81
TNFRSF4-202ENST00000453580 FAM184BQ9ULE4 1060 aa20.12■□□□□ 0.81
TNFRSF4-202ENST00000453580 TRIOBPQ9H2D6 2365 aa20.12■□□□□ 0.81
TNFRSF4-202ENST00000453580 SMCHD1A6NHR9 2005 aa20.11■□□□□ 0.81
TNFRSF4-202ENST00000453580 NMT2O60551 498 aa20.11■□□□□ 0.81
TNFRSF4-202ENST00000453580 IMMTQ16891 758 aaKnown RBP20.11■□□□□ 0.81
TNFRSF4-202ENST00000453580 LRRC26Q2I0M4 334 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms