RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PPP4R3AQ6IN85 833 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 CXorf57Q6NSI4 855 aaKnown RBP5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 PDXDC1Q6P996 788 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 FBXL19Q6PCT2 694 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 Q6ZS46 218 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 ACAD11Q709F0 780 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 DDX46Q7L014 1031 aaKnown RBP5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 MAATS1Q7Z4T9 603 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 VN1R5Q7Z5H4 357 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 NBPF11Q86T75 865 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 CCNJLQ8IV13 435 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 TMEM130Q8N3G9 435 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 UBASH3BQ8TF42 649 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 ZNF622Q969S3 477 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 KRTAP4-12Q9BQ66 201 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 KRTAP9-9Q9BYP9 154 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 KRTAP9-4Q9BYQ2 154 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 CSRNP2Q9H175 543 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 CNNM2Q9H8M5 875 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 LGR6Q9HBX8 967 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 OSGEPQ9NPF4 335 aa5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 DIS3Q9Y2L1 958 aaKnown RBP5.35□□□□□ -1.55
HMGB3P21-201ENST00000452483 ANO9A1A5B4 782 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 GSG1L2A8MUP6 293 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 DDX3YO15523 660 aaKnown RBP5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 GADD45BO75293 160 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 RPN1P04843 607 aaKnown RBP5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 U2AF1L5P0DN76 240 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 GLB1P16278 677 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 NLRP12P59046 1061 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 U2AF1Q01081 240 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 NUCB1Q02818 461 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 IKBKEQ14164 716 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 MAP3K11Q16584 847 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 SNAP47Q5SQN1 464 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 PRPF40BQ6NWY9 871 aaKnown RBP5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 CNNM4Q6P4Q7 775 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 ANKRD23Q86SG2 305 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 CHCHD4Q8N4Q1 142 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 MSL3Q8N5Y2 521 aaKnown RBP5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 WDR66Q8TBY9 1149 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 RSPH1Q8WYR4 309 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 KLHDC7BQ96G42 594 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 CDK5RAP3Q96JB5 506 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 FERD3LQ96RJ6 166 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 TCF12Q99081 682 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 TRIM56Q9BRZ2 755 aaKnown RBP5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 BCO2Q9BYV7 579 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 SEMA6BQ9H3T3 888 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 RETREG1Q9H6L5 497 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 FAM50BQ9Y247 325 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 SLC45A1Q9Y2W3 748 aa5.34□□□□□ -1.55
HMGB3P21-201ENST00000452483 A0A096LPE4 126 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 A0A1W2PPZ6 126 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 KLRG2A4D1S0 409 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 APAF1O14727 1248 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 CLGNO14967 610 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 ORC4O43929 436 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 H2AFB1P0C5Y9 115 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 H2AFB2P0C5Z0 115 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 FAM200BP0CF97 657 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 ESRRAP11474 423 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 RLBP1P12271 317 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 TNFAIP3P21580 790 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 ITGB7P26010 798 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 GSTT1P30711 240 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 GRIA4P48058 902 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 GIPRP48546 466 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 ARL4DP49703 201 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 RENBPP51606 427 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 CASP7P55210 303 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 C19orf57Q0VDD7 668 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 STRN3Q13033 797 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 CBX2Q14781 532 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 SAFBQ15424 915 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 DUOXA2Q1HG44 320 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 KIAA0319Q5VV43 1072 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 HGSNATQ68CP4 663 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 CFAP161Q6P656 301 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 KIAA1211Q6ZU35 1233 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 TOGARAM2Q6ZUX3 1019 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 STRA8Q7Z7C7 330 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 DZIP1LQ8IYY4 767 aaKnown RBP5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 ST13P5Q8NFI4 369 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 USP33Q8TEY7 942 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 LEO1Q8WVC0 666 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 SLC26A8Q96RN1 970 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 RHOBTB2Q9BYZ6 727 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 EHD4Q9H223 541 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 LUC7LQ9NQ29 371 aaKnown RBP5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 IP6K2Q9UHH9 426 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 DGKBQ9Y6T7 804 aa5.33□□□□□ -1.56
HMGB3P21-201ENST00000452483 hCG_1984214I3L0E3 225 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 SOX1O00570 391 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 SNX2O60749 519 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 RFPL3O75679 317 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 ABLIM3O94929 683 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 RHOBTB3O94955 611 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 EYA4O95677 639 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms