RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 REPS2Q8NFH8 660 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 STX8Q9UNK0 236 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 LAMA3Q16787 3333 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 A0A0D9SFI3 127 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 PFASO15067 1338 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 IGHA2P01877 340 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 BMP3P12645 472 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 FXR1P51114 621 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHD3-206ENST00000452447 NUCB1Q02818 461 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 ALX1Q15699 326 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 ANAPC4Q9UJX5 808 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHD3-206ENST00000452447 SEPT4O43236 478 aa15.27■□□□□ 0.03
CHD3-206ENST00000452447 RANBP6O60518 1105 aaKnown RBP15.27■□□□□ 0.03
CHD3-206ENST00000452447 FGAP02671 866 aa15.27■□□□□ 0.03
CHD3-206ENST00000452447 COL6A1P12109 1028 aa15.27■□□□□ 0.03
CHD3-206ENST00000452447 SLC1A4P43007 532 aa15.27■□□□□ 0.03
CHD3-206ENST00000452447 NMIQ13287 307 aaPredicted RBP15.27■□□□□ 0.03
CHD3-206ENST00000452447 PRAMEF19Q5SWL8 479 aa15.27■□□□□ 0.03
CHD3-206ENST00000452447 PLEKHM2Q8IWE5 1019 aa15.27■□□□□ 0.03
CHD3-206ENST00000452447 ARRDC4Q8NCT1 418 aa15.27■□□□□ 0.03
CHD3-206ENST00000452447 DDX11Q96FC9 970 aa15.27■□□□□ 0.03
CHD3-206ENST00000452447 SENP6Q9GZR1 1112 aaPredicted RBP15.27■□□□□ 0.03
CHD3-206ENST00000452447 INCENPQ9NQS7 918 aa15.27■□□□□ 0.03
CHD3-206ENST00000452447 TOMM22Q9NS69 142 aa15.27■□□□□ 0.03
CHD3-206ENST00000452447 SUPT16HQ9Y5B9 1047 aaKnown RBP15.27■□□□□ 0.03
CHD3-206ENST00000452447 TMEM232C9JQI7 657 aa15.26■□□□□ 0.03
CHD3-206ENST00000452447 DNM1LO00429 736 aa15.26■□□□□ 0.03
CHD3-206ENST00000452447 ATP2A1O14983 1001 aa15.26■□□□□ 0.03
CHD3-206ENST00000452447 HSPD1P10809 573 aaKnown RBP15.26■□□□□ 0.03
CHD3-206ENST00000452447 STAT2P52630 851 aa15.26■□□□□ 0.03
CHD3-206ENST00000452447 MFAP1P55081 439 aaKnown RBP15.26■□□□□ 0.03
CHD3-206ENST00000452447 IKQ13123 557 aaPredicted RBP15.26■□□□□ 0.03
CHD3-206ENST00000452447 TINF2Q9BSI4 451 aa15.26■□□□□ 0.03
CHD3-206ENST00000452447 SLC38A10Q9HBR0 1119 aa15.26■□□□□ 0.03
CHD3-206ENST00000452447 ZMYND8Q9ULU4 1186 aaPredicted RBP15.26■□□□□ 0.03
CHD3-206ENST00000452447 DIS3Q9Y2L1 958 aaKnown RBP15.26■□□□□ 0.03
CHD3-206ENST00000452447 CCDC171Q6TFL3 1326 aa15.25■□□□□ 0.03
CHD3-206ENST00000452447 MYCNP04198 464 aaPredicted RBP15.25■□□□□ 0.03
CHD3-206ENST00000452447 FDX1P10109 184 aa15.25■□□□□ 0.03
CHD3-206ENST00000452447 MCCP23508 829 aa15.25■□□□□ 0.03
CHD3-206ENST00000452447 ZNF792Q3KQV3 632 aa15.25■□□□□ 0.03
CHD3-206ENST00000452447 ANO1Q5XXA6 986 aa15.25■□□□□ 0.03
CHD3-206ENST00000452447 CHURC1Q8WUH1 139 aa15.25■□□□□ 0.03
CHD3-206ENST00000452447 GMCL1Q96IK5 515 aa15.25■□□□□ 0.03
CHD3-206ENST00000452447 OSBPL3Q9H4L5 887 aa15.25■□□□□ 0.03
CHD3-206ENST00000452447 RAVER2Q9HCJ3 691 aaKnown RBP15.25■□□□□ 0.03
CHD3-206ENST00000452447 RIPK3Q9Y572 518 aa15.25■□□□□ 0.03
CHD3-206ENST00000452447 ORC4O43929 436 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 NMT2O60551 498 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 SYN1P17600 705 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 SDSP20132 328 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 OAZ1P54368 228 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 RRP12Q5JTH9 1297 aaKnown RBP15.24■□□□□ 0.03
CHD3-206ENST00000452447 GJC2Q5T442 439 aaPredicted RBP15.24■□□□□ 0.03
CHD3-206ENST00000452447 ZNF589Q86UQ0 364 aaPredicted RBP15.24■□□□□ 0.03
CHD3-206ENST00000452447 FAM160B2Q86V87 743 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 CHMP4CQ96CF2 233 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 PRO3102Q9H379 93 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 IL17RBQ9NRM6 502 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 FBXO40Q9UH90 709 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 NRBP1Q9UHY1 535 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 CNPY2Q9Y2B0 182 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 ZMYM6O95789 1325 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 A0A1W2PPC1 479 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 KBTBD13C9JR72 458 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 FGRP09769 529 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 LRRC26Q2I0M4 334 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 ANKRD35Q8N283 1001 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 DIAPH3Q9NSV4 1193 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 PCDH10Q9P2E7 1040 aa15.24■□□□□ 0.03
CHD3-206ENST00000452447 MCM3APO60318 1980 aa15.23■□□□□ 0.03
CHD3-206ENST00000452447 RARBP10826 455 aa15.23■□□□□ 0.03
CHD3-206ENST00000452447 RCSD1Q6JBY9 416 aa15.23■□□□□ 0.03
CHD3-206ENST00000452447 KCTD1Q719H9 257 aa15.23■□□□□ 0.03
CHD3-206ENST00000452447 CHST13Q8NET6 341 aa15.23■□□□□ 0.03
CHD3-206ENST00000452447 STAG1Q8WVM7 1258 aa15.23■□□□□ 0.03
CHD3-206ENST00000452447 MTMR7Q9Y216 660 aa15.23■□□□□ 0.03
CHD3-206ENST00000452447 HIP1O00291 1037 aa15.22■□□□□ 0.03
CHD3-206ENST00000452447 ATN1P54259 1190 aaPredicted RBP15.22■□□□□ 0.03
CHD3-206ENST00000452447 HAND2P61296 217 aa15.22■□□□□ 0.03
CHD3-206ENST00000452447 CWC27Q6UX04 472 aaKnown RBP15.22■□□□□ 0.03
CHD3-206ENST00000452447 MFSD6Q6ZSS7 791 aa15.22■□□□□ 0.03
CHD3-206ENST00000452447 MSL3Q8N5Y2 521 aaKnown RBP15.22■□□□□ 0.03
CHD3-206ENST00000452447 HOMER2Q9NSB8 354 aa15.22■□□□□ 0.03
CHD3-206ENST00000452447 TACC3Q9Y6A5 838 aa15.22■□□□□ 0.03
CHD3-206ENST00000452447 DNAJC25-GNG10A0A024R161 153 aa15.21■□□□□ 0.03
CHD3-206ENST00000452447 PLA2G6O60733 806 aa15.21■□□□□ 0.03
CHD3-206ENST00000452447 PCP11498 1178 aaKnown RBP15.21■□□□□ 0.03
CHD3-206ENST00000452447 GDF15Q99988 308 aa15.21■□□□□ 0.03
CHD3-206ENST00000452447 RNF41Q9H4P4 317 aaPredicted RBP15.21■□□□□ 0.03
CHD3-206ENST00000452447 XPNPEP3Q9NQH7 507 aa15.21■□□□□ 0.03
CHD3-206ENST00000452447 SYNGAP1Q96PV0 1343 aa15.21■□□□□ 0.02
CHD3-206ENST00000452447 ZNF213O14771 459 aa15.2■□□□□ 0.02
CHD3-206ENST00000452447 TOP1P11387 765 aaKnown RBP15.2■□□□□ 0.02
CHD3-206ENST00000452447 AKR1A1P14550 325 aa15.2■□□□□ 0.02
CHD3-206ENST00000452447 TAL1P17542 331 aaPredicted RBP15.2■□□□□ 0.02
CHD3-206ENST00000452447 BMP8BP34820 402 aa15.2■□□□□ 0.02
CHD3-206ENST00000452447 CCDC96Q2M329 555 aa15.2■□□□□ 0.02
CHD3-206ENST00000452447 AKNAD1Q5T1N1 836 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms