RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 PLA2G6O60733 806 aa28.06■■■□□ 2.08
CPSF4-207ENST00000451876 RABEP1Q15276 862 aa28.06■■■□□ 2.08
CPSF4-207ENST00000451876 BTNL9Q6UXG8 535 aa28.06■■■□□ 2.08
CPSF4-207ENST00000451876 LBX2Q6XYB7 198 aa28.06■■■□□ 2.08
CPSF4-207ENST00000451876 PRPF38AQ8NAV1 312 aaKnown RBP28.06■■■□□ 2.08
CPSF4-207ENST00000451876 UBA5Q9GZZ9 404 aa28.06■■■□□ 2.08
CPSF4-207ENST00000451876 HOXC10Q9NYD6 342 aa28.06■■■□□ 2.08
CPSF4-207ENST00000451876 ADAMTS5Q9UNA0 930 aa28.06■■■□□ 2.08
CPSF4-207ENST00000451876 HPS5Q9UPZ3 1129 aa28.06■■■□□ 2.08
CPSF4-207ENST00000451876 MYH6P13533 1939 aa28.06■■■□□ 2.08
CPSF4-207ENST00000451876 BAZ2BQ9UIF8 2168 aaKnown RBP28.06■■■□□ 2.08
CPSF4-207ENST00000451876 ZSWIM8A7E2V4 1837 aa28.05■■■□□ 2.08
CPSF4-207ENST00000451876 C17orf99Q6UX52 265 aa28.05■■■□□ 2.08
CPSF4-207ENST00000451876 SYNE3Q6ZMZ3 975 aa28.05■■■□□ 2.08
CPSF4-207ENST00000451876 FAM160B2Q86V87 743 aa28.05■■■□□ 2.08
CPSF4-207ENST00000451876 ANKRD13CQ8N6S4 541 aa28.05■■■□□ 2.08
CPSF4-207ENST00000451876 CHURC1Q8WUH1 139 aa28.05■■■□□ 2.08
CPSF4-207ENST00000451876 MAP3K14Q99558 947 aa28.05■■■□□ 2.08
CPSF4-207ENST00000451876 RBPJLQ9UBG7 517 aa28.05■■■□□ 2.08
CPSF4-207ENST00000451876 PRR12Q9ULL5 1215 aa28.05■■■□□ 2.08
CPSF4-207ENST00000451876 KLRF2D3W0D1 207 aa28.04■■■□□ 2.08
CPSF4-207ENST00000451876 CALM1P0DP23 149 aa28.04■■■□□ 2.08
CPSF4-207ENST00000451876 CALM2P0DP24 149 aa28.04■■■□□ 2.08
CPSF4-207ENST00000451876 CALM3P0DP25 149 aa28.04■■■□□ 2.08
CPSF4-207ENST00000451876 SLC35G1Q2M3R5 365 aa28.04■■■□□ 2.08
CPSF4-207ENST00000451876 NOL8Q76FK4 1167 aaKnown RBP28.04■■■□□ 2.08
CPSF4-207ENST00000451876 FANCBQ8NB91 859 aa28.04■■■□□ 2.08
CPSF4-207ENST00000451876 CTCFLQ8NI51 663 aaPredicted RBP28.04■■■□□ 2.08
CPSF4-207ENST00000451876 PAGR1Q9BTK6 254 aa28.04■■■□□ 2.08
CPSF4-207ENST00000451876 BTBD7Q9P203 1132 aa28.04■■■□□ 2.08
CPSF4-207ENST00000451876 VWA5AO00534 786 aa28.03■■■□□ 2.08
CPSF4-207ENST00000451876 CNMDO75829 334 aa28.03■■■□□ 2.08
CPSF4-207ENST00000451876 HSPA1AP0DMV8 641 aaKnown RBP28.03■■■□□ 2.08
CPSF4-207ENST00000451876 HSPA1BP0DMV9 641 aaKnown RBP28.03■■■□□ 2.08
CPSF4-207ENST00000451876 BCRP11274 1271 aa28.03■■■□□ 2.08
CPSF4-207ENST00000451876 SYDE2Q5VT97 1194 aa28.03■■■□□ 2.08
CPSF4-207ENST00000451876 NBPF11Q86T75 865 aa28.03■■■□□ 2.08
CPSF4-207ENST00000451876 TPCN1Q9ULQ1 816 aa28.03■■■□□ 2.08
CPSF4-207ENST00000451876 GOLGA8AA7E2F4 631 aa28.03■■■□□ 2.08
CPSF4-207ENST00000451876 PDIA3P30101 505 aaKnown RBP28.03■■■□□ 2.08
CPSF4-207ENST00000451876 GCLCP48506 637 aaPredicted RBP28.03■■■□□ 2.08
CPSF4-207ENST00000451876 PLEKHA8P1O95397 391 aa28.02■■■□□ 2.08
CPSF4-207ENST00000451876 KIF5BP33176 963 aa28.02■■■□□ 2.08
CPSF4-207ENST00000451876 RCAN1P53805 252 aa28.02■■■□□ 2.08
CPSF4-207ENST00000451876 SNAP25P60880 206 aa28.02■■■□□ 2.08
CPSF4-207ENST00000451876 CMTR1Q8N1G2 835 aaKnown RBP28.02■■■□□ 2.08
CPSF4-207ENST00000451876 REPS2Q8NFH8 660 aa28.02■■■□□ 2.08
CPSF4-207ENST00000451876 NID2Q14112 1375 aa28.02■■■□□ 2.08
CPSF4-207ENST00000451876 MGAMO43451 1857 aa28.02■■■□□ 2.08
CPSF4-207ENST00000451876 SMCHD1A6NHR9 2005 aa28.02■■■□□ 2.08
CPSF4-207ENST00000451876 FOXN1O15353 648 aa28.01■■■□□ 2.07
CPSF4-207ENST00000451876 CDC27P30260 824 aa28.01■■■□□ 2.07
CPSF4-207ENST00000451876 METAP2P50579 478 aaKnown RBP eCLIP28.01■■■□□ 2.07
CPSF4-207ENST00000451876 ANKRD1Q15327 319 aa28.01■■■□□ 2.07
CPSF4-207ENST00000451876 RTN1Q16799 776 aa28.01■■■□□ 2.07
CPSF4-207ENST00000451876 SLC38A10Q9HBR0 1119 aa28.01■■■□□ 2.07
CPSF4-207ENST00000451876 FAM217BQ9NTX9 383 aaPredicted RBP28.01■■■□□ 2.07
CPSF4-207ENST00000451876 CYTH3O43739 400 aa28■■■□□ 2.07
CPSF4-207ENST00000451876 TMEM132BQ14DG7 1078 aa28■■■□□ 2.07
CPSF4-207ENST00000451876 FAM110CQ1W6H9 321 aa28■■■□□ 2.07
CPSF4-207ENST00000451876 ADGRF4Q8IZF3 695 aa28■■■□□ 2.07
CPSF4-207ENST00000451876 GTF3C2Q8WUA4 911 aaPredicted RBP28■■■□□ 2.07
CPSF4-207ENST00000451876 MORF4L1Q9UBU8 362 aa28■■■□□ 2.07
CPSF4-207ENST00000451876 ZNF214Q9UL59 606 aaPredicted RBP28■■■□□ 2.07
CPSF4-207ENST00000451876 RABGAP1Q9Y3P9 1069 aa28■■■□□ 2.07
CPSF4-207ENST00000451876 GPR25O00155 361 aa28■■■□□ 2.07
CPSF4-207ENST00000451876 LARGE1O95461 756 aa28■■■□□ 2.07
CPSF4-207ENST00000451876 Q3C1V9 767 aa28■■■□□ 2.07
CPSF4-207ENST00000451876 ZNF274Q96GC6 653 aaPredicted RBP28■■■□□ 2.07
CPSF4-207ENST00000451876 CD2BP2O95400 341 aaKnown RBP27.99■■■□□ 2.07
CPSF4-207ENST00000451876 ERVK-9P63128 1117 aa27.99■■■□□ 2.07
CPSF4-207ENST00000451876 ERVK-24P63145 666 aa27.99■■■□□ 2.07
CPSF4-207ENST00000451876 CCT2P78371 535 aaKnown RBP27.99■■■□□ 2.07
CPSF4-207ENST00000451876 STK3Q13188 491 aa27.99■■■□□ 2.07
CPSF4-207ENST00000451876 TMTC3Q6ZXV5 915 aa27.99■■■□□ 2.07
CPSF4-207ENST00000451876 MB21D1Q8N884 522 aa27.99■■■□□ 2.07
CPSF4-207ENST00000451876 RANBP17Q9H2T7 1088 aaKnown RBP27.99■■■□□ 2.07
CPSF4-207ENST00000451876 NCOA5Q9HCD5 579 aaKnown RBP27.99■■■□□ 2.07
CPSF4-207ENST00000451876 SRBD1Q8N5C6 995 aaKnown RBP27.98■■■□□ 2.07
CPSF4-207ENST00000451876 JMJD4Q9H9V9 463 aa27.98■■■□□ 2.07
CPSF4-207ENST00000451876 VAT1LQ9HCJ6 419 aa27.98■■■□□ 2.07
CPSF4-207ENST00000451876 ZNF536O15090 1300 aa27.97■■■□□ 2.07
CPSF4-207ENST00000451876 DHX16O60231 1041 aaKnown RBP27.97■■■□□ 2.07
CPSF4-207ENST00000451876 ADD1P35611 737 aaKnown RBP27.97■■■□□ 2.07
CPSF4-207ENST00000451876 CPXCR1Q8N123 301 aa27.97■■■□□ 2.07
CPSF4-207ENST00000451876 GPRC5AQ8NFJ5 357 aa27.97■■■□□ 2.07
CPSF4-207ENST00000451876 RBM28Q9NW13 759 aaKnown RBP27.97■■■□□ 2.07
CPSF4-207ENST00000451876 CASP8AP2Q9UKL3 1982 aa27.97■■■□□ 2.07
CPSF4-207ENST00000451876 ZBED4O75132 1171 aa27.96■■■□□ 2.07
CPSF4-207ENST00000451876 PLS1Q14651 629 aa27.96■■■□□ 2.07
CPSF4-207ENST00000451876 ME3Q16798 604 aa27.96■■■□□ 2.07
CPSF4-207ENST00000451876 CCDC174Q6PII3 467 aa27.96■■■□□ 2.07
CPSF4-207ENST00000451876 CCDC82Q8N4S0 544 aa27.96■■■□□ 2.07
CPSF4-207ENST00000451876 SPATC1LQ9H0A9 340 aa27.96■■■□□ 2.07
CPSF4-207ENST00000451876 RIOX1Q9H6W3 641 aa27.96■■■□□ 2.07
CPSF4-207ENST00000451876 RAVER2Q9HCJ3 691 aaKnown RBP27.96■■■□□ 2.07
CPSF4-207ENST00000451876 ST18O60284 1047 aa27.96■■■□□ 2.07
CPSF4-207ENST00000451876 ECM2O94769 699 aaPredicted RBP27.96■■■□□ 2.07
CPSF4-207ENST00000451876 HSPA8P11142 646 aaKnown RBP27.96■■■□□ 2.07
CPSF4-207ENST00000451876 TAL1P17542 331 aaPredicted RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms