RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 ORC4O43929 436 aa14.68□□□□□ -0.06
MSH5-209ENST00000450148 SLC3A2P08195 630 aaKnown RBP14.68□□□□□ -0.06
MSH5-209ENST00000450148 HSPD1P10809 573 aaKnown RBP14.68□□□□□ -0.06
MSH5-209ENST00000450148 FCER1AP12319 257 aa14.68□□□□□ -0.06
MSH5-209ENST00000450148 ZNF792Q3KQV3 632 aa14.68□□□□□ -0.06
MSH5-209ENST00000450148 SLFN13Q68D06 897 aa14.68□□□□□ -0.06
MSH5-209ENST00000450148 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.68□□□□□ -0.06
MSH5-209ENST00000450148 MMP19Q99542 508 aa14.68□□□□□ -0.06
MSH5-209ENST00000450148 TRIM6-TRIM34B2RNG4 842 aa14.67□□□□□ -0.06
MSH5-209ENST00000450148 NMT2O60551 498 aa14.67□□□□□ -0.06
MSH5-209ENST00000450148 MSCO60682 206 aa14.67□□□□□ -0.06
MSH5-209ENST00000450148 PGK2P07205 417 aa14.67□□□□□ -0.06
MSH5-209ENST00000450148 SDSP20132 328 aa14.67□□□□□ -0.06
MSH5-209ENST00000450148 COPB2P35606 906 aa14.67□□□□□ -0.06
MSH5-209ENST00000450148 PRAMEF19Q5SWL8 479 aa14.67□□□□□ -0.06
MSH5-209ENST00000450148 TEX13BQ9BXU2 312 aa14.67□□□□□ -0.06
MSH5-209ENST00000450148 SLC38A10Q9HBR0 1119 aa14.67□□□□□ -0.06
MSH5-209ENST00000450148 SLC5A4Q9NY91 659 aa14.67□□□□□ -0.06
MSH5-209ENST00000450148 FEM1BQ9UK73 627 aa14.67□□□□□ -0.06
MSH5-209ENST00000450148 DIS3Q9Y2L1 958 aaKnown RBP14.67□□□□□ -0.06
MSH5-209ENST00000450148 CCDC171Q6TFL3 1326 aa14.66□□□□□ -0.06
MSH5-209ENST00000450148 DNAJC25-GNG10A0A024R161 153 aa14.66□□□□□ -0.06
MSH5-209ENST00000450148 TSPY2A6NKD2 308 aa14.66□□□□□ -0.06
MSH5-209ENST00000450148 SEPT4O43236 478 aa14.66□□□□□ -0.06
MSH5-209ENST00000450148 BMP3P12645 472 aa14.66□□□□□ -0.06
MSH5-209ENST00000450148 CNGA1P29973 690 aa14.66□□□□□ -0.06
MSH5-209ENST00000450148 SNRNP48Q6IEG0 339 aaKnown RBP14.66□□□□□ -0.06
MSH5-209ENST00000450148 RASGRP2Q7LDG7 609 aa14.66□□□□□ -0.06
MSH5-209ENST00000450148 C7orf61Q8IZ16 206 aa14.66□□□□□ -0.06
MSH5-209ENST00000450148 RILPL2Q969X0 211 aa14.66□□□□□ -0.06
MSH5-209ENST00000450148 GMCL1Q96IK5 515 aa14.66□□□□□ -0.06
MSH5-209ENST00000450148 LCTP09848 1927 aa14.66□□□□□ -0.06
MSH5-209ENST00000450148 KCTD2Q14681 263 aa14.65□□□□□ -0.06
MSH5-209ENST00000450148 LRRC26Q2I0M4 334 aa14.65□□□□□ -0.06
MSH5-209ENST00000450148 KIFC2Q96AC6 838 aa14.65□□□□□ -0.06
MSH5-209ENST00000450148 TINF2Q9BSI4 451 aa14.65□□□□□ -0.06
MSH5-209ENST00000450148 RAVER2Q9HCJ3 691 aaKnown RBP14.65□□□□□ -0.06
MSH5-209ENST00000450148 ZNF536O15090 1300 aa14.65□□□□□ -0.06
MSH5-209ENST00000450148 TMEM232C9JQI7 657 aa14.64□□□□□ -0.07
MSH5-209ENST00000450148 RANBP6O60518 1105 aaKnown RBP14.64□□□□□ -0.07
MSH5-209ENST00000450148 PLA2G6O60733 806 aa14.64□□□□□ -0.07
MSH5-209ENST00000450148 ZBED4O75132 1171 aa14.64□□□□□ -0.07
MSH5-209ENST00000450148 TAL1P17542 331 aaPredicted RBP14.64□□□□□ -0.07
MSH5-209ENST00000450148 MCCP23508 829 aa14.64□□□□□ -0.07
MSH5-209ENST00000450148 PDE4AP27815 886 aa14.64□□□□□ -0.07
MSH5-209ENST00000450148 OAZ1P54368 228 aa14.64□□□□□ -0.07
MSH5-209ENST00000450148 ANO1Q5XXA6 986 aa14.64□□□□□ -0.07
MSH5-209ENST00000450148 CPXCR1Q8N123 301 aa14.64□□□□□ -0.07
MSH5-209ENST00000450148 FGD4Q96M96 766 aa14.64□□□□□ -0.07
MSH5-209ENST00000450148 GDF15Q99988 308 aa14.64□□□□□ -0.07
MSH5-209ENST00000450148 NRBP1Q9UHY1 535 aa14.64□□□□□ -0.07
MSH5-209ENST00000450148 STX8Q9UNK0 236 aa14.64□□□□□ -0.07
MSH5-209ENST00000450148 DNM1LO00429 736 aa14.63□□□□□ -0.07
MSH5-209ENST00000450148 ZNF865P0CJ78 1059 aaPredicted RBP14.63□□□□□ -0.07
MSH5-209ENST00000450148 SLC1A4P43007 532 aa14.63□□□□□ -0.07
MSH5-209ENST00000450148 STAT2P52630 851 aa14.63□□□□□ -0.07
MSH5-209ENST00000450148 HAND2P61296 217 aa14.63□□□□□ -0.07
MSH5-209ENST00000450148 PPP4R3BQ5MIZ7 849 aa14.63□□□□□ -0.07
MSH5-209ENST00000450148 RCSD1Q6JBY9 416 aa14.63□□□□□ -0.07
MSH5-209ENST00000450148 TBC1D10CQ8IV04 446 aa14.63□□□□□ -0.07
MSH5-209ENST00000450148 STAG1Q8WVM7 1258 aa14.63□□□□□ -0.07
MSH5-209ENST00000450148 TCP11L1Q9NUJ3 509 aa14.63□□□□□ -0.07
MSH5-209ENST00000450148 PCDH10Q9P2E7 1040 aa14.63□□□□□ -0.07
MSH5-209ENST00000450148 ZMYND8Q9ULU4 1186 aaPredicted RBP14.63□□□□□ -0.07
MSH5-209ENST00000450148 SNAI1O95863 264 aaPredicted RBP14.62□□□□□ -0.07
MSH5-209ENST00000450148 FDX1P10109 184 aa14.62□□□□□ -0.07
MSH5-209ENST00000450148 SYN1P17600 705 aa14.62□□□□□ -0.07
MSH5-209ENST00000450148 AKNAD1Q5T1N1 836 aa14.62□□□□□ -0.07
MSH5-209ENST00000450148 GJC2Q5T442 439 aaPredicted RBP14.62□□□□□ -0.07
MSH5-209ENST00000450148 MAMDC4Q6UXC1 1216 aa14.62□□□□□ -0.07
MSH5-209ENST00000450148 KCTD1Q719H9 257 aa14.62□□□□□ -0.07
MSH5-209ENST00000450148 FAM160B2Q86V87 743 aa14.62□□□□□ -0.07
MSH5-209ENST00000450148 CHST13Q8NET6 341 aa14.62□□□□□ -0.07
MSH5-209ENST00000450148 CHURC1Q8WUH1 139 aa14.62□□□□□ -0.07
MSH5-209ENST00000450148 CHMP4CQ96CF2 233 aa14.62□□□□□ -0.07
MSH5-209ENST00000450148 SENP6Q9GZR1 1112 aaPredicted RBP14.62□□□□□ -0.07
MSH5-209ENST00000450148 IL25Q9H293 177 aa14.62□□□□□ -0.07
MSH5-209ENST00000450148 LTBP2Q14767 1821 aa14.62□□□□□ -0.07
MSH5-209ENST00000450148 GSPT1P15170 499 aaKnown RBP14.61□□□□□ -0.07
MSH5-209ENST00000450148 BMP8BP34820 402 aa14.61□□□□□ -0.07
MSH5-209ENST00000450148 IRX6P78412 446 aaPredicted RBP14.61□□□□□ -0.07
MSH5-209ENST00000450148 LRRC41Q15345 812 aa14.61□□□□□ -0.07
MSH5-209ENST00000450148 RRP12Q5JTH9 1297 aaKnown RBP14.61□□□□□ -0.07
MSH5-209ENST00000450148 CWC27Q6UX04 472 aaKnown RBP14.61□□□□□ -0.07
MSH5-209ENST00000450148 MSL3Q8N5Y2 521 aaKnown RBP14.61□□□□□ -0.07
MSH5-209ENST00000450148 AGBL1Q96MI9 1066 aa14.61□□□□□ -0.07
MSH5-209ENST00000450148 TMEM47Q9BQJ4 181 aa14.61□□□□□ -0.07
MSH5-209ENST00000450148 PRR12Q9ULL5 1215 aa14.61□□□□□ -0.07
MSH5-209ENST00000450148 NEDD4P46934 1319 aa14.61□□□□□ -0.07
MSH5-209ENST00000450148 SYNGAP1Q96PV0 1343 aa14.61□□□□□ -0.07
MSH5-209ENST00000450148 LRRC37A2A6NM11 1700 aa14.61□□□□□ -0.07
MSH5-209ENST00000450148 A0A1W2PPC1 479 aa14.6□□□□□ -0.07
MSH5-209ENST00000450148 TOP1P11387 765 aaKnown RBP14.6□□□□□ -0.07
MSH5-209ENST00000450148 PCP11498 1178 aaKnown RBP14.6□□□□□ -0.07
MSH5-209ENST00000450148 SLC4A3P48751 1232 aa14.6□□□□□ -0.07
MSH5-209ENST00000450148 SNX17Q15036 470 aa14.6□□□□□ -0.07
MSH5-209ENST00000450148 TTBK2Q6IQ55 1244 aa14.6□□□□□ -0.07
MSH5-209ENST00000450148 BTNL9Q6UXG8 535 aa14.6□□□□□ -0.07
MSH5-209ENST00000450148 ZNF467Q7Z7K2 595 aaPredicted RBP14.6□□□□□ -0.07
MSH5-209ENST00000450148 ARRDC4Q8NCT1 418 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms