RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 SLC4A3P48751 1232 aa18.09■□□□□ 0.49
CHD3-205ENST00000449744 FXR1P51114 621 aaKnown RBP eCLIP18.09■□□□□ 0.49
CHD3-205ENST00000449744 SNRNP48Q6IEG0 339 aaKnown RBP18.09■□□□□ 0.49
CHD3-205ENST00000449744 CPXCR1Q8N123 301 aa18.09■□□□□ 0.49
CHD3-205ENST00000449744 INCENPQ9NQS7 918 aa18.09■□□□□ 0.49
CHD3-205ENST00000449744 CYBAP13498 195 aa18.08■□□□□ 0.48
CHD3-205ENST00000449744 SLC1A4P43007 532 aa18.08■□□□□ 0.48
CHD3-205ENST00000449744 MNX1P50219 401 aaPredicted RBP18.08■□□□□ 0.48
CHD3-205ENST00000449744 IKQ13123 557 aaPredicted RBP18.08■□□□□ 0.48
CHD3-205ENST00000449744 RRP12Q5JTH9 1297 aaKnown RBP18.08■□□□□ 0.48
CHD3-205ENST00000449744 CHRDL2Q6WN34 429 aa18.08■□□□□ 0.48
CHD3-205ENST00000449744 ZNF589Q86UQ0 364 aaPredicted RBP18.08■□□□□ 0.48
CHD3-205ENST00000449744 MAML3Q96JK9 1138 aa18.08■□□□□ 0.48
CHD3-205ENST00000449744 DIAPH3Q9NSV4 1193 aa18.08■□□□□ 0.48
CHD3-205ENST00000449744 HIP1O00291 1037 aa18.07■□□□□ 0.48
CHD3-205ENST00000449744 ORC4O43929 436 aa18.07■□□□□ 0.48
CHD3-205ENST00000449744 PGK2P07205 417 aa18.07■□□□□ 0.48
CHD3-205ENST00000449744 IRX6P78412 446 aaPredicted RBP18.07■□□□□ 0.48
CHD3-205ENST00000449744 TRPV1Q8NER1 839 aa18.07■□□□□ 0.48
CHD3-205ENST00000449744 DDX11Q96FC9 970 aa18.07■□□□□ 0.48
CHD3-205ENST00000449744 ZMYM6O95789 1325 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 TMEM232C9JQI7 657 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 ATP2A1O14983 1001 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 NMT2O60551 498 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 IGHA2P01877 340 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 FDX1P10109 184 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 MCCP23508 829 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 STAT2P52630 851 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 CWC27Q6UX04 472 aaKnown RBP18.06■□□□□ 0.48
CHD3-205ENST00000449744 FAM160B2Q86V87 743 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 C7orf61Q8IZ16 206 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 CHURC1Q8WUH1 139 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 CHMP4CQ96CF2 233 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 GMCL1Q96IK5 515 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 SLC38A10Q9HBR0 1119 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 RAVER2Q9HCJ3 691 aaKnown RBP18.06■□□□□ 0.48
CHD3-205ENST00000449744 IL17RBQ9NRM6 502 aa18.06■□□□□ 0.48
CHD3-205ENST00000449744 DIS3Q9Y2L1 958 aaKnown RBP18.06■□□□□ 0.48
CHD3-205ENST00000449744 FGRP09769 529 aa18.05■□□□□ 0.48
CHD3-205ENST00000449744 HAND2P61296 217 aa18.05■□□□□ 0.48
CHD3-205ENST00000449744 STAG1Q8WVM7 1258 aa18.05■□□□□ 0.48
CHD3-205ENST00000449744 MTMR7Q9Y216 660 aa18.05■□□□□ 0.48
CHD3-205ENST00000449744 TACC3Q9Y6A5 838 aa18.05■□□□□ 0.48
CHD3-205ENST00000449744 TRIOBPQ9H2D6 2365 aa18.04■□□□□ 0.48
CHD3-205ENST00000449744 PFASO15067 1338 aa18.04■□□□□ 0.48
CHD3-205ENST00000449744 ZNFX1Q9P2E3 1918 aaKnown RBP18.04■□□□□ 0.48
CHD3-205ENST00000449744 SEPT4O43236 478 aa18.04■□□□□ 0.48
CHD3-205ENST00000449744 OAZ1P54368 228 aa18.04■□□□□ 0.48
CHD3-205ENST00000449744 ZNF792Q3KQV3 632 aa18.04■□□□□ 0.48
CHD3-205ENST00000449744 PRAMEF19Q5SWL8 479 aa18.04■□□□□ 0.48
CHD3-205ENST00000449744 RCSD1Q6JBY9 416 aa18.04■□□□□ 0.48
CHD3-205ENST00000449744 MFSD6Q6ZSS7 791 aa18.04■□□□□ 0.48
CHD3-205ENST00000449744 ARRDC4Q8NCT1 418 aa18.04■□□□□ 0.48
CHD3-205ENST00000449744 TINF2Q9BSI4 451 aa18.04■□□□□ 0.48
CHD3-205ENST00000449744 RNF41Q9H4P4 317 aaPredicted RBP18.04■□□□□ 0.48
CHD3-205ENST00000449744 FBXO40Q9UH90 709 aa18.04■□□□□ 0.48
CHD3-205ENST00000449744 RIPK3Q9Y572 518 aa18.04■□□□□ 0.48
CHD3-205ENST00000449744 DNM1LO00429 736 aa18.03■□□□□ 0.48
CHD3-205ENST00000449744 PCP11498 1178 aaKnown RBP18.03■□□□□ 0.48
CHD3-205ENST00000449744 COL6A1P12109 1028 aa18.03■□□□□ 0.48
CHD3-205ENST00000449744 CCDC96Q2M329 555 aa18.03■□□□□ 0.48
CHD3-205ENST00000449744 AKNAD1Q5T1N1 836 aa18.03■□□□□ 0.48
CHD3-205ENST00000449744 ANO1Q5XXA6 986 aa18.03■□□□□ 0.48
CHD3-205ENST00000449744 KCTD1Q719H9 257 aa18.03■□□□□ 0.48
CHD3-205ENST00000449744 ANKRD35Q8N283 1001 aa18.03■□□□□ 0.48
CHD3-205ENST00000449744 CHST13Q8NET6 341 aa18.03■□□□□ 0.48
CHD3-205ENST00000449744 NRBP1Q9UHY1 535 aa18.03■□□□□ 0.48
CHD3-205ENST00000449744 FRMPD3Q5JV73 1810 aa18.02■□□□□ 0.48
CHD3-205ENST00000449744 ZNF213O14771 459 aa18.02■□□□□ 0.48
CHD3-205ENST00000449744 MYCNP04198 464 aaPredicted RBP18.02■□□□□ 0.48
CHD3-205ENST00000449744 SENP6Q9GZR1 1112 aaPredicted RBP18.02■□□□□ 0.48
CHD3-205ENST00000449744 TCP11L1Q9NUJ3 509 aa18.02■□□□□ 0.48
CHD3-205ENST00000449744 RBM27Q9P2N5 1060 aaKnown RBP18.02■□□□□ 0.48
CHD3-205ENST00000449744 ZMYND8Q9ULU4 1186 aaPredicted RBP18.02■□□□□ 0.48
CHD3-205ENST00000449744 CNPY2Q9Y2B0 182 aa18.02■□□□□ 0.48
CHD3-205ENST00000449744 ALPK3Q96L96 1907 aa18.02■□□□□ 0.47
CHD3-205ENST00000449744 KBTBD13C9JR72 458 aa18.01■□□□□ 0.47
CHD3-205ENST00000449744 PLA2G6O60733 806 aa18.01■□□□□ 0.47
CHD3-205ENST00000449744 TOP1P11387 765 aaKnown RBP18.01■□□□□ 0.47
CHD3-205ENST00000449744 NOVP48745 357 aa18.01■□□□□ 0.47
CHD3-205ENST00000449744 GJC2Q5T442 439 aaPredicted RBP18.01■□□□□ 0.47
CHD3-205ENST00000449744 DCAF4Q8WV16 495 aa18.01■□□□□ 0.47
CHD3-205ENST00000449744 ESR2Q92731 530 aa18.01■□□□□ 0.47
CHD3-205ENST00000449744 HOMER2Q9NSB8 354 aa18.01■□□□□ 0.47
CHD3-205ENST00000449744 RARBP10826 455 aa18■□□□□ 0.47
CHD3-205ENST00000449744 PDE4AP27815 886 aa18■□□□□ 0.47
CHD3-205ENST00000449744 MSL3Q8N5Y2 521 aaKnown RBP18■□□□□ 0.47
CHD3-205ENST00000449744 TMEM47Q9BQJ4 181 aa18■□□□□ 0.47
CHD3-205ENST00000449744 ACAD9Q9H845 621 aa18■□□□□ 0.47
CHD3-205ENST00000449744 PRR12Q9ULL5 1215 aa18■□□□□ 0.47
CHD3-205ENST00000449744 PLXNA1Q9UIW2 1896 aa18■□□□□ 0.47
CHD3-205ENST00000449744 DNAJC25-GNG10A0A024R161 153 aa17.99■□□□□ 0.47
CHD3-205ENST00000449744 LRRC26Q2I0M4 334 aa17.99■□□□□ 0.47
CHD3-205ENST00000449744 TKFCQ3LXA3 575 aa17.99■□□□□ 0.47
CHD3-205ENST00000449744 TTC22Q5TAA0 569 aa17.99■□□□□ 0.47
CHD3-205ENST00000449744 CCDC174Q6PII3 467 aa17.99■□□□□ 0.47
CHD3-205ENST00000449744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.99■□□□□ 0.47
CHD3-205ENST00000449744 TBC1D10CQ8IV04 446 aa17.99■□□□□ 0.47
CHD3-205ENST00000449744 TTC14Q96N46 770 aa17.99■□□□□ 0.47
CHD3-205ENST00000449744 DSCC1Q9BVC3 393 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms