RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 NEK8Q86SG6 692 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 IFIH1Q9BYX4 1025 aaKnown RBP7.95□□□□□ -1.14
BEST1-202ENST00000449131 GLT8D2Q9H1C3 349 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 SLC39A2Q9NP94 309 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 SAMSN1Q9NSI8 373 aaKnown RBP7.95□□□□□ -1.14
BEST1-202ENST00000449131 MAN1B1Q9UKM7 699 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 DNM3Q9UQ16 869 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 ARHGEF28Q8N1W1 1705 aaKnown RBP7.95□□□□□ -1.14
BEST1-202ENST00000449131 NBPF26B4DH59 902 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 ERVV-1B6SEH8 477 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 CALRP27797 417 aaKnown RBP7.95□□□□□ -1.14
BEST1-202ENST00000449131 ERCC5P28715 1186 aaPredicted RBP7.95□□□□□ -1.14
BEST1-202ENST00000449131 BTDP43251 543 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 COPB1P53618 953 aaKnown RBP7.95□□□□□ -1.14
BEST1-202ENST00000449131 VWA3BQ502W6 1294 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 NBPF10Q6P3W6 841 aaKnown RBP7.95□□□□□ -1.14
BEST1-202ENST00000449131 TBC1D10CQ8IV04 446 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 NBPF15Q8N660 670 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 SAR1BQ9Y6B6 198 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 MYOM1P52179 1685 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 SPATA31D1Q6ZQQ2 1576 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 DCAF8L1A6NGE4 600 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 CFBP00751 764 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 EEF2P13639 858 aaKnown RBP7.95□□□□□ -1.14
BEST1-202ENST00000449131 EZRP15311 586 aaKnown RBP7.95□□□□□ -1.14
BEST1-202ENST00000449131 TNFAIP3P21580 790 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 CCDC25Q86WR0 208 aa7.95□□□□□ -1.14
BEST1-202ENST00000449131 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.95□□□□□ -1.14
BEST1-202ENST00000449131 SPATA31A3Q5VYP0 1347 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 ZNF335Q9H4Z2 1342 aaPredicted RBP7.94□□□□□ -1.14
BEST1-202ENST00000449131 SLFN14P0C7P3 912 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 PCP11498 1178 aaKnown RBP7.94□□□□□ -1.14
BEST1-202ENST00000449131 COL9A3Q14050 684 aaPredicted RBP7.94□□□□□ -1.14
BEST1-202ENST00000449131 STOX1Q6ZVD7 989 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 ARFGAP2Q8N6H7 521 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 ANKRD13CQ8N6S4 541 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 AFAP1L1Q8TED9 768 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 EPSTI1Q96J88 318 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 EPN1Q9Y6I3 576 aaPredicted RBP7.94□□□□□ -1.14
BEST1-202ENST00000449131 NRKQ7Z2Y5 1582 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 EFCAB8A8MWE9 144 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 DDX39AO00148 427 aaKnown RBP7.94□□□□□ -1.14
BEST1-202ENST00000449131 CEP104O60308 925 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 LONP1P36776 959 aaKnown RBP7.94□□□□□ -1.14
BEST1-202ENST00000449131 SCNN1DP51172 638 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 ZSCAN26Q16670 478 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 GRIPAP1Q4V328 841 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 SFMBT2Q5VUG0 894 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 SND1Q7KZF4 910 aaKnown RBP eCLIP7.94□□□□□ -1.14
BEST1-202ENST00000449131 CCDC91Q7Z6B0 441 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 KLHL7Q8IXQ5 586 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 UBLCP1Q8WVY7 318 aaPredicted RBP7.94□□□□□ -1.14
BEST1-202ENST00000449131 SELENOSQ9BQE4 189 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 IRX2Q9BZI1 471 aaPredicted RBP7.94□□□□□ -1.14
BEST1-202ENST00000449131 SPTLC3Q9NUV7 552 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 PCDHA12Q9UN75 941 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 ADGRL3Q9HAR2 1447 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 CDC42BPGQ6DT37 1551 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 ARHGEF35A5YM69 484 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 BACH1O14867 736 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 SCARF1Q14162 830 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 CYB5R4Q7L1T6 521 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 CPXCR1Q8N123 301 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 FAM212AQ96EL1 285 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 TRIM31Q9BZY9 425 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 ARHGEF10LQ9HCE6 1279 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 PDE11AQ9HCR9 933 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 USP21Q9UK80 565 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 ATP6V0A2Q9Y487 856 aa7.94□□□□□ -1.14
BEST1-202ENST00000449131 FOXN1O15353 648 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 CALUO43852 315 aaPredicted RBP7.93□□□□□ -1.14
BEST1-202ENST00000449131 NEBLO76041 1014 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 GCNT3O95395 438 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 FOXO4P98177 505 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 PLCB3Q01970 1234 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 FAM182BQ5T319 152 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 BRINP3Q76B58 766 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 TICAM2Q86XR7 235 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 MYOCDQ8IZQ8 938 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 MYCT1Q8N699 235 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 GIMAP7Q8NHV1 300 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 PAIP2Q9BPZ3 127 aaKnown RBP7.93□□□□□ -1.14
BEST1-202ENST00000449131 SYNCQ9H7C4 482 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 PCDHB13Q9Y5F0 798 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 A0A1W2PRG0 241 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 CCDC169A6NNP5 214 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 USP17L8P0C7I0 530 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 HPDP32754 393 aaPredicted RBP7.93□□□□□ -1.14
BEST1-202ENST00000449131 ACTN2P35609 894 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 RBL2Q08999 1139 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 GPBP1Q86WP2 473 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 CCDC50Q8IVM0 306 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 OTUD6BQ8N6M0 293 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 ENOX1Q8TC92 643 aaKnown RBP7.93□□□□□ -1.14
BEST1-202ENST00000449131 IMPG2Q9BZV3 1241 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 NT5C3AQ9H0P0 336 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 HAUS4Q9H6D7 363 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 PSTPIP2Q9H939 334 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 MRPL44Q9H9J2 332 aaKnown RBP7.93□□□□□ -1.14
BEST1-202ENST00000449131 SRPRBQ9Y5M8 271 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms