RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 MAP4K1Q92918 833 aa29.41■■■□□ 2.3
UFD1-204ENST00000447868 TTC14Q96N46 770 aa29.41■■■□□ 2.3
UFD1-204ENST00000447868 APBA2Q99767 749 aa29.41■■■□□ 2.3
UFD1-204ENST00000447868 RNF208Q9H0X6 261 aa29.41■■■□□ 2.3
UFD1-204ENST00000447868 ZNF214Q9UL59 606 aaPredicted RBP29.41■■■□□ 2.3
UFD1-204ENST00000447868 SLC25A27O95847 323 aa29.4■■■□□ 2.3
UFD1-204ENST00000447868 SLC4A3P48751 1232 aa29.4■■■□□ 2.3
UFD1-204ENST00000447868 NT5C2P49902 561 aa29.4■■■□□ 2.3
UFD1-204ENST00000447868 TRIM32Q13049 653 aa29.4■■■□□ 2.3
UFD1-204ENST00000447868 CCL14Q16627 93 aa29.4■■■□□ 2.3
UFD1-204ENST00000447868 CPXCR1Q8N123 301 aa29.4■■■□□ 2.3
UFD1-204ENST00000447868 CHURC1Q8WUH1 139 aa29.4■■■□□ 2.3
UFD1-204ENST00000447868 DCAF4Q8WV16 495 aa29.4■■■□□ 2.3
UFD1-204ENST00000447868 RBM8AQ9Y5S9 174 aaKnown RBP29.4■■■□□ 2.3
UFD1-204ENST00000447868 ZKSCAN1P17029 563 aaPredicted RBP29.39■■■□□ 2.3
UFD1-204ENST00000447868 ERICH6BQ5W0A0 696 aa29.39■■■□□ 2.3
UFD1-204ENST00000447868 FAM160B2Q86V87 743 aa29.39■■■□□ 2.3
UFD1-204ENST00000447868 ZSCAN10Q96SZ4 725 aaPredicted RBP29.39■■■□□ 2.3
UFD1-204ENST00000447868 BRCA2P51587 3418 aa29.38■■■□□ 2.29
UFD1-204ENST00000447868 STRNO43815 780 aa29.38■■■□□ 2.29
UFD1-204ENST00000447868 ADORA2AP29274 412 aa29.38■■■□□ 2.29
UFD1-204ENST00000447868 CCDC178Q5BJE1 867 aa29.38■■■□□ 2.29
UFD1-204ENST00000447868 SNRNP48Q6IEG0 339 aaKnown RBP29.38■■■□□ 2.29
UFD1-204ENST00000447868 TEX13BQ9BXU2 312 aa29.38■■■□□ 2.29
UFD1-204ENST00000447868 LSG1Q9H089 658 aaKnown RBP29.38■■■□□ 2.29
UFD1-204ENST00000447868 SLC38A10Q9HBR0 1119 aa29.38■■■□□ 2.29
UFD1-204ENST00000447868 RAVER2Q9HCJ3 691 aaKnown RBP29.38■■■□□ 2.29
UFD1-204ENST00000447868 TAF6LQ9Y6J9 622 aa29.38■■■□□ 2.29
UFD1-204ENST00000447868 CDC45O75419 566 aa29.37■■■□□ 2.29
UFD1-204ENST00000447868 TRDNQ13061 729 aa29.37■■■□□ 2.29
UFD1-204ENST00000447868 DPP9Q86TI2 863 aa29.37■■■□□ 2.29
UFD1-204ENST00000447868 DGKHQ86XP1 1220 aa29.37■■■□□ 2.29
UFD1-204ENST00000447868 TRMT44Q8IYL2 757 aaKnown RBP29.37■■■□□ 2.29
UFD1-204ENST00000447868 UBAC1Q9BSL1 405 aa29.37■■■□□ 2.29
UFD1-204ENST00000447868 ANO2Q9NQ90 1003 aa29.37■■■□□ 2.29
UFD1-204ENST00000447868 FRMPD2Q68DX3 1309 aaPredicted RBP29.37■■■□□ 2.29
UFD1-204ENST00000447868 FCER1AP12319 257 aa29.36■■■□□ 2.29
UFD1-204ENST00000447868 CASC1Q6TDU7 716 aa29.36■■■□□ 2.29
UFD1-204ENST00000447868 ENAHQ8N8S7 591 aaPredicted RBP29.36■■■□□ 2.29
UFD1-204ENST00000447868 NPLOC4Q8TAT6 608 aa29.36■■■□□ 2.29
UFD1-204ENST00000447868 GPCPD1Q9NPB8 672 aa29.36■■■□□ 2.29
UFD1-204ENST00000447868 TNKSO95271 1327 aa29.36■■■□□ 2.29
UFD1-204ENST00000447868 E7EWF7 191 aa29.35■■■□□ 2.29
UFD1-204ENST00000447868 PLA2G6O60733 806 aa29.35■■■□□ 2.29
UFD1-204ENST00000447868 PDHBP11177 359 aa29.35■■■□□ 2.29
UFD1-204ENST00000447868 COPB2P35606 906 aa29.35■■■□□ 2.29
UFD1-204ENST00000447868 TTBK2Q6IQ55 1244 aa29.35■■■□□ 2.29
UFD1-204ENST00000447868 CYB5R4Q7L1T6 521 aa29.35■■■□□ 2.29
UFD1-204ENST00000447868 MMP19Q99542 508 aa29.35■■■□□ 2.29
UFD1-204ENST00000447868 FLRT1Q9NZU1 646 aa29.35■■■□□ 2.29
UFD1-204ENST00000447868 RIPK3Q9Y572 518 aa29.35■■■□□ 2.29
UFD1-204ENST00000447868 ZNF236Q9UL36 1845 aa29.35■■■□□ 2.29
UFD1-204ENST00000447868 ATP2A1O14983 1001 aa29.34■■■□□ 2.29
UFD1-204ENST00000447868 GJB1P08034 283 aa29.34■■■□□ 2.29
UFD1-204ENST00000447868 PRKAR2AP13861 404 aaKnown RBP29.34■■■□□ 2.29
UFD1-204ENST00000447868 SLC16A2P36021 539 aa29.34■■■□□ 2.29
UFD1-204ENST00000447868 SNAP25P60880 206 aa29.34■■■□□ 2.29
UFD1-204ENST00000447868 KAT14Q9H8E8 782 aa29.34■■■□□ 2.29
UFD1-204ENST00000447868 PRR12Q9ULL5 1215 aa29.34■■■□□ 2.29
UFD1-204ENST00000447868 ZNFX1Q9P2E3 1918 aaKnown RBP29.33■■■□□ 2.29
UFD1-204ENST00000447868 COBLO75128 1261 aa29.33■■■□□ 2.29
UFD1-204ENST00000447868 HOXC6P09630 235 aa29.33■■■□□ 2.29
UFD1-204ENST00000447868 FDX1P10109 184 aa29.33■■■□□ 2.29
UFD1-204ENST00000447868 STOX1Q6ZVD7 989 aa29.33■■■□□ 2.29
UFD1-204ENST00000447868 RALYLQ86SE5 291 aaKnown RBP29.33■■■□□ 2.29
UFD1-204ENST00000447868 ABRAQ8N0Z2 381 aa29.33■■■□□ 2.29
UFD1-204ENST00000447868 PNMA1Q8ND90 353 aa29.33■■■□□ 2.29
UFD1-204ENST00000447868 KCTD2Q14681 263 aa29.32■■■□□ 2.28
UFD1-204ENST00000447868 CCDC174Q6PII3 467 aa29.32■■■□□ 2.28
UFD1-204ENST00000447868 NCOA7Q8NI08 942 aa29.32■■■□□ 2.28
UFD1-204ENST00000447868 ANKS1AQ92625 1134 aa29.32■■■□□ 2.28
UFD1-204ENST00000447868 DEFB118Q96PH6 123 aa29.32■■■□□ 2.28
UFD1-204ENST00000447868 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.32■■■□□ 2.28
UFD1-204ENST00000447868 HMX1Q9NP08 348 aaPredicted RBP29.32■■■□□ 2.28
UFD1-204ENST00000447868 RPTORQ8N122 1335 aa29.31■■■□□ 2.28
UFD1-204ENST00000447868 GJA8P48165 433 aa29.31■■■□□ 2.28
UFD1-204ENST00000447868 OAZ1P54368 228 aa29.31■■■□□ 2.28
UFD1-204ENST00000447868 CACNB2Q08289 660 aaPredicted RBP29.31■■■□□ 2.28
UFD1-204ENST00000447868 ZNF543Q08ER8 600 aa29.31■■■□□ 2.28
UFD1-204ENST00000447868 MFSD14CQ5VZR4 134 aa29.31■■■□□ 2.28
UFD1-204ENST00000447868 U2AF1L4Q8WU68 220 aaKnown RBP29.31■■■□□ 2.28
UFD1-204ENST00000447868 SHISA4Q96DD7 197 aa29.31■■■□□ 2.28
UFD1-204ENST00000447868 PAK6Q9NQU5 681 aaPredicted RBP29.31■■■□□ 2.28
UFD1-204ENST00000447868 HOMER2Q9NSB8 354 aa29.31■■■□□ 2.28
UFD1-204ENST00000447868 SLC5A4Q9NY91 659 aa29.31■■■□□ 2.28
UFD1-204ENST00000447868 PGK2P07205 417 aa29.3■■■□□ 2.28
UFD1-204ENST00000447868 SNHG28P0DPA3 235 aa29.3■■■□□ 2.28
UFD1-204ENST00000447868 IFIT1BQ5T764 474 aaKnown RBP29.3■■■□□ 2.28
UFD1-204ENST00000447868 MAP3K21Q5TCX8 1036 aa29.3■■■□□ 2.28
UFD1-204ENST00000447868 SYDE2Q5VT97 1194 aa29.3■■■□□ 2.28
UFD1-204ENST00000447868 AGBL1Q96MI9 1066 aa29.3■■■□□ 2.28
UFD1-204ENST00000447868 ZNF536O15090 1300 aa29.29■■■□□ 2.28
UFD1-204ENST00000447868 SLC27A2O14975 620 aa29.29■■■□□ 2.28
UFD1-204ENST00000447868 GOLGA8HP0CJ92 632 aa29.29■■■□□ 2.28
UFD1-204ENST00000447868 BTNL9Q6UXG8 535 aa29.29■■■□□ 2.28
UFD1-204ENST00000447868 CHST3Q7LGC8 479 aa29.29■■■□□ 2.28
UFD1-204ENST00000447868 SGPL1O95470 568 aa29.28■■■□□ 2.28
UFD1-204ENST00000447868 CYP2C19P33261 490 aa29.28■■■□□ 2.28
UFD1-204ENST00000447868 SEC23AQ15436 765 aa29.28■■■□□ 2.28
UFD1-204ENST00000447868 CREB3L3Q68CJ9 461 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms