RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 SPP2Q13103 211 aa28.67■■■□□ 2.18
RFFL-206ENST00000447669 EARS2Q5JPH6 523 aaKnown RBP28.67■■■□□ 2.18
RFFL-206ENST00000447669 PNMA8AQ86V59 439 aaPredicted RBP28.67■■■□□ 2.18
RFFL-206ENST00000447669 COA7Q96BR5 231 aa28.67■■■□□ 2.18
RFFL-206ENST00000447669 USP28Q96RU2 1077 aa28.67■■■□□ 2.18
RFFL-206ENST00000447669 GOLGA6L22H0YM25 854 aa28.67■■■□□ 2.18
RFFL-206ENST00000447669 TRAF5O00463 557 aa28.67■■■□□ 2.18
RFFL-206ENST00000447669 XBP1P17861 261 aa28.67■■■□□ 2.18
RFFL-206ENST00000447669 U2AF2P26368 475 aaKnown RBP eCLIP28.67■■■□□ 2.182e-6■■□□□ 12.6
RFFL-206ENST00000447669 NLRP5P59047 1200 aa28.67■■■□□ 2.18
RFFL-206ENST00000447669 MTMR2Q13614 643 aa28.67■■■□□ 2.18
RFFL-206ENST00000447669 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.67■■■□□ 2.18
RFFL-206ENST00000447669 PICK1Q9NRD5 415 aa28.67■■■□□ 2.18
RFFL-206ENST00000447669 SEC63Q9UGP8 760 aaKnown RBP28.67■■■□□ 2.18
RFFL-206ENST00000447669 ZHX2Q9Y6X8 837 aa28.67■■■□□ 2.18
RFFL-206ENST00000447669 KRT85P78386 507 aa28.66■■■□□ 2.18
RFFL-206ENST00000447669 NMRK2Q9NPI5 230 aa28.66■■■□□ 2.18
RFFL-206ENST00000447669 BARHL2Q9NY43 387 aa28.66■■■□□ 2.18
RFFL-206ENST00000447669 RBM27Q9P2N5 1060 aaKnown RBP28.66■■■□□ 2.18
RFFL-206ENST00000447669 TAL1P17542 331 aaPredicted RBP28.65■■■□□ 2.18
RFFL-206ENST00000447669 SAFBQ15424 915 aaKnown RBP eCLIP28.65■■■□□ 2.18
RFFL-206ENST00000447669 MYSM1Q5VVJ2 828 aa28.65■■■□□ 2.18
RFFL-206ENST00000447669 CNKSR2Q8WXI2 1034 aa28.65■■■□□ 2.18
RFFL-206ENST00000447669 TRIM75PA6NK02 468 aa28.65■■■□□ 2.18
RFFL-206ENST00000447669 VGLL4Q14135 290 aa28.65■■■□□ 2.18
RFFL-206ENST00000447669 PHIPQ8WWQ0 1821 aa28.64■■■□□ 2.18
RFFL-206ENST00000447669 OTOFQ9HC10 1997 aa28.64■■■□□ 2.18
RFFL-206ENST00000447669 RASGRP4Q8TDF6 673 aa28.64■■■□□ 2.18
RFFL-206ENST00000447669 FBXO28Q9NVF7 368 aa28.64■■■□□ 2.18
RFFL-206ENST00000447669 CLIC4Q9Y696 253 aa28.64■■■□□ 2.18
RFFL-206ENST00000447669 SMCHD1A6NHR9 2005 aa28.64■■■□□ 2.18
RFFL-206ENST00000447669 NOSTRINQ8IVI9 506 aa28.64■■■□□ 2.17
RFFL-206ENST00000447669 SYNPO2Q9UMS6 1093 aa28.64■■■□□ 2.17
RFFL-206ENST00000447669 PPP1R12BO60237 982 aaPredicted RBP28.63■■■□□ 2.17
RFFL-206ENST00000447669 KRT2P35908 639 aa28.63■■■□□ 2.17
RFFL-206ENST00000447669 BRAPQ7Z569 592 aa28.63■■■□□ 2.17
RFFL-206ENST00000447669 SH2D4AQ9H788 454 aa28.63■■■□□ 2.17
RFFL-206ENST00000447669 SNCAIPQ9Y6H5 919 aa28.63■■■□□ 2.17
RFFL-206ENST00000447669 NAPAP54920 295 aa28.62■■■□□ 2.17
RFFL-206ENST00000447669 MAP3K9P80192 1104 aa28.62■■■□□ 2.17
RFFL-206ENST00000447669 TTLL12Q14166 644 aaPredicted RBP28.62■■■□□ 2.17
RFFL-206ENST00000447669 QRICH1Q2TAL8 776 aa28.62■■■□□ 2.17
RFFL-206ENST00000447669 RGS22Q8NE09 1264 aa28.62■■■□□ 2.17
RFFL-206ENST00000447669 MTMR8Q96EF0 704 aa28.62■■■□□ 2.17
RFFL-206ENST00000447669 CLMNQ96JQ2 1002 aa28.62■■■□□ 2.17
RFFL-206ENST00000447669 FOXP1Q9H334 677 aaPredicted RBP28.62■■■□□ 2.17
RFFL-206ENST00000447669 EMILIN3Q9NT22 766 aa28.62■■■□□ 2.17
RFFL-206ENST00000447669 PNMA6FA0A0J9YX94 578 aa28.62■■■□□ 2.17
RFFL-206ENST00000447669 TRAK2O60296 914 aa28.62■■■□□ 2.17
RFFL-206ENST00000447669 CDC37Q16543 378 aaPredicted RBP28.62■■■□□ 2.17
RFFL-206ENST00000447669 SYDE2Q5VT97 1194 aa28.62■■■□□ 2.17
RFFL-206ENST00000447669 LEO1Q8WVC0 666 aaPredicted RBP28.62■■■□□ 2.17
RFFL-206ENST00000447669 KIAA1683Q9H0B3 1180 aa28.62■■■□□ 2.17
RFFL-206ENST00000447669 ZNF408Q9H9D4 720 aa28.62■■■□□ 2.17
RFFL-206ENST00000447669 ZBTB5O15062 677 aa28.61■■■□□ 2.17
RFFL-206ENST00000447669 ZNF280CQ8ND82 737 aa28.61■■■□□ 2.17
RFFL-206ENST00000447669 SPATA32Q96LK8 384 aa28.61■■■□□ 2.17
RFFL-206ENST00000447669 GINM1Q9NU53 330 aa28.61■■■□□ 2.17
RFFL-206ENST00000447669 PRR12Q9ULL5 1215 aa28.61■■■□□ 2.17
RFFL-206ENST00000447669 ATP2B1P20020 1258 aa28.6■■■□□ 2.17
RFFL-206ENST00000447669 STAT2P52630 851 aa28.6■■■□□ 2.17
RFFL-206ENST00000447669 KIFC2Q96AC6 838 aa28.6■■■□□ 2.17
RFFL-206ENST00000447669 SH3GLB2Q9NR46 395 aa28.6■■■□□ 2.17
RFFL-206ENST00000447669 TOB1P50616 345 aaPredicted RBP28.6■■■□□ 2.17
RFFL-206ENST00000447669 GPT2Q8TD30 523 aa28.6■■■□□ 2.17
RFFL-206ENST00000447669 TNFRSF25Q93038 417 aa28.6■■■□□ 2.17
RFFL-206ENST00000447669 SMCO2A6NFE2 343 aa28.59■■■□□ 2.17
RFFL-206ENST00000447669 NOL9Q5SY16 702 aaKnown RBP28.59■■■□□ 2.17
RFFL-206ENST00000447669 BTNL9Q6UXG8 535 aa28.59■■■□□ 2.17
RFFL-206ENST00000447669 PAPPA2Q9BXP8 1791 aa28.59■■■□□ 2.17
RFFL-206ENST00000447669 DCAF8L1A6NGE4 600 aa28.59■■■□□ 2.17
RFFL-206ENST00000447669 HMGCS2P54868 508 aa28.59■■■□□ 2.17
RFFL-206ENST00000447669 BACE1P56817 501 aa28.59■■■□□ 2.17
RFFL-206ENST00000447669 BLIDQ8IZY5 108 aa28.59■■■□□ 2.17
RFFL-206ENST00000447669 ZNF396Q96N95 335 aaPredicted RBP28.59■■■□□ 2.17
RFFL-206ENST00000447669 WDR18Q9BV38 432 aa28.59■■■□□ 2.17
RFFL-206ENST00000447669 ELP3Q9H9T3 547 aa28.59■■■□□ 2.17
RFFL-206ENST00000447669 WNT7AO00755 349 aa28.58■■■□□ 2.17
RFFL-206ENST00000447669 NF2P35240 595 aa28.58■■■□□ 2.17
RFFL-206ENST00000447669 TMEM87AQ8NBN3 555 aa28.58■■■□□ 2.17
RFFL-206ENST00000447669 PCDHA4Q9UN74 947 aa28.58■■■□□ 2.17
RFFL-206ENST00000447669 VCAM1P19320 739 aa28.57■■■□□ 2.16
RFFL-206ENST00000447669 IREB2P48200 963 aaKnown RBP28.57■■■□□ 2.16
RFFL-206ENST00000447669 CFAP45Q9UL16 551 aa28.57■■■□□ 2.16
RFFL-206ENST00000447669 DDX49Q9Y6V7 483 aaKnown RBP28.57■■■□□ 2.16
RFFL-206ENST00000447669 USH1GQ495M9 461 aa28.57■■■□□ 2.16
RFFL-206ENST00000447669 PIK3AP1Q6ZUJ8 805 aa28.57■■■□□ 2.16
RFFL-206ENST00000447669 ZMYND12Q9H0C1 365 aa28.57■■■□□ 2.16
RFFL-206ENST00000447669 AS3MTQ9HBK9 375 aa28.57■■■□□ 2.16
RFFL-206ENST00000447669 BRMS1Q9HCU9 246 aa28.57■■■□□ 2.16
RFFL-206ENST00000447669 AFG3L2Q9Y4W6 797 aa28.57■■■□□ 2.16
RFFL-206ENST00000447669 CCDC148Q8NFR7 591 aa28.56■■■□□ 2.16
RFFL-206ENST00000447669 SCAND2PQ9GZW5 306 aaPredicted RBP28.56■■■□□ 2.16
RFFL-206ENST00000447669 CSADQ9Y600 493 aa28.56■■■□□ 2.16
RFFL-206ENST00000447669 SF3A1Q15459 793 aaKnown RBP28.55■■■□□ 2.16
RFFL-206ENST00000447669 CCDC174Q6PII3 467 aa28.55■■■□□ 2.16
RFFL-206ENST00000447669 PCDHA6Q9UN73 950 aa28.55■■■□□ 2.16
RFFL-206ENST00000447669 PCDHA8Q9Y5H6 950 aa28.55■■■□□ 2.16
RFFL-206ENST00000447669 M0R2N6 131 aa28.55■■■□□ 2.16
RFFL-206ENST00000447669 CALML3P27482 149 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms