RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 VWA5AO00534 786 aa16.59■□□□□ 0.25
SREBF1-207ENST00000447641 FMNL1O95466 1100 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-207ENST00000447641 HSPA4P34932 840 aa16.59■□□□□ 0.25
SREBF1-207ENST00000447641 RNF20Q5VTR2 975 aa16.59■□□□□ 0.25
SREBF1-207ENST00000447641 PRPF38AQ8NAV1 312 aaKnown RBP16.59■□□□□ 0.25
SREBF1-207ENST00000447641 REPS2Q8NFH8 660 aa16.59■□□□□ 0.25
SREBF1-207ENST00000447641 IGDCC4Q8TDY8 1250 aa16.59■□□□□ 0.25
SREBF1-207ENST00000447641 DCAF4Q8WV16 495 aa16.59■□□□□ 0.25
SREBF1-207ENST00000447641 ATG4CQ96DT6 458 aa16.59■□□□□ 0.25
SREBF1-207ENST00000447641 MTA3Q9BTC8 594 aa16.59■□□□□ 0.25
SREBF1-207ENST00000447641 USP26Q9BXU7 913 aa16.59■□□□□ 0.25
SREBF1-207ENST00000447641 TNKSO95271 1327 aa16.59■□□□□ 0.25
SREBF1-207ENST00000447641 RAD21O60216 631 aa16.58■□□□□ 0.24
SREBF1-207ENST00000447641 PDHBP11177 359 aa16.58■□□□□ 0.24
SREBF1-207ENST00000447641 SLC1A4P43007 532 aa16.58■□□□□ 0.24
SREBF1-207ENST00000447641 FCGRTP55899 365 aa16.58■□□□□ 0.24
SREBF1-207ENST00000447641 BTNL9Q6UXG8 535 aa16.58■□□□□ 0.24
SREBF1-207ENST00000447641 RALYLQ86SE5 291 aaKnown RBP16.58■□□□□ 0.24
SREBF1-207ENST00000447641 U2AF1L4Q8WU68 220 aaKnown RBP16.58■□□□□ 0.24
SREBF1-207ENST00000447641 SLF1Q9BQI6 1058 aa16.58■□□□□ 0.24
SREBF1-207ENST00000447641 UBAC1Q9BSL1 405 aa16.58■□□□□ 0.24
SREBF1-207ENST00000447641 RNF208Q9H0X6 261 aa16.58■□□□□ 0.24
SREBF1-207ENST00000447641 VCANP13611 3396 aa16.58■□□□□ 0.24
SREBF1-207ENST00000447641 FARP2O94887 1054 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-207ENST00000447641 TMEM132BQ14DG7 1078 aa16.57■□□□□ 0.24
SREBF1-207ENST00000447641 RASGRP2Q7LDG7 609 aa16.57■□□□□ 0.24
SREBF1-207ENST00000447641 PNMA1Q8ND90 353 aa16.57■□□□□ 0.24
SREBF1-207ENST00000447641 CHURC1Q8WUH1 139 aa16.57■□□□□ 0.24
SREBF1-207ENST00000447641 PAGR1Q9BTK6 254 aa16.57■□□□□ 0.24
SREBF1-207ENST00000447641 PORCNQ9H237 461 aa16.57■□□□□ 0.24
SREBF1-207ENST00000447641 TMEM232C9JQI7 657 aa16.56■□□□□ 0.24
SREBF1-207ENST00000447641 ATP2A1O14983 1001 aa16.56■□□□□ 0.24
SREBF1-207ENST00000447641 MAPK4P31152 587 aa16.56■□□□□ 0.24
SREBF1-207ENST00000447641 EXOSC10Q01780 885 aaKnown RBP16.56■□□□□ 0.24
SREBF1-207ENST00000447641 ADCK5Q3MIX3 580 aa16.56■□□□□ 0.24
SREBF1-207ENST00000447641 KCTD1Q719H9 257 aa16.56■□□□□ 0.24
SREBF1-207ENST00000447641 FAM160B2Q86V87 743 aa16.56■□□□□ 0.24
SREBF1-207ENST00000447641 LRCH3Q96II8 777 aa16.56■□□□□ 0.24
SREBF1-207ENST00000447641 HTATIP2Q9BUP3 242 aa16.56■□□□□ 0.24
SREBF1-207ENST00000447641 SPATC1LQ9H0A9 340 aa16.56■□□□□ 0.24
SREBF1-207ENST00000447641 KAT14Q9H8E8 782 aa16.56■□□□□ 0.24
SREBF1-207ENST00000447641 UPF2Q9HAU5 1272 aaKnown RBP16.56■□□□□ 0.24
SREBF1-207ENST00000447641 SLC38A10Q9HBR0 1119 aa16.56■□□□□ 0.24
SREBF1-207ENST00000447641 GJD2Q9UKL4 321 aa16.56■□□□□ 0.24
SREBF1-207ENST00000447641 ZNF214Q9UL59 606 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-207ENST00000447641 SPTBN5Q9NRC6 3674 aaKnown RBP16.56■□□□□ 0.24
SREBF1-207ENST00000447641 WDR19Q8NEZ3 1342 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 IFIT3O14879 490 aaKnown RBP16.55■□□□□ 0.24
SREBF1-207ENST00000447641 FDX1P10109 184 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 ELNP15502 786 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 ZKSCAN1P17029 563 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-207ENST00000447641 HOXD10P28358 340 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 MCM5P33992 734 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 STAT2P52630 851 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 CCNA1P78396 465 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 ZNF543Q08ER8 600 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 KRT32Q14532 448 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 IFIT1BQ5T764 474 aaKnown RBP16.55■□□□□ 0.24
SREBF1-207ENST00000447641 CHST3Q7LGC8 479 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 SLAIN1Q8ND83 568 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 SHCBP1Q8NEM2 672 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 NEK1Q96PY6 1258 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 MOV10L1Q9BXT6 1211 aaKnown RBP16.55■□□□□ 0.24
SREBF1-207ENST00000447641 SENP2Q9HC62 589 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 SNX14Q9Y5W7 946 aa16.55■□□□□ 0.24
SREBF1-207ENST00000447641 TNPO2O14787 897 aaKnown RBP16.54■□□□□ 0.24
SREBF1-207ENST00000447641 PRC1O43663 620 aa16.54■□□□□ 0.24
SREBF1-207ENST00000447641 SGPL1O95470 568 aa16.54■□□□□ 0.24
SREBF1-207ENST00000447641 INHAP05111 366 aa16.54■□□□□ 0.24
SREBF1-207ENST00000447641 UBXN2AP68543 259 aa16.54■□□□□ 0.24
SREBF1-207ENST00000447641 SART3Q15020 963 aaKnown RBP16.54■□□□□ 0.24
SREBF1-207ENST00000447641 TTBK2Q6IQ55 1244 aa16.54■□□□□ 0.24
SREBF1-207ENST00000447641 USP6NLQ92738 828 aa16.54■□□□□ 0.24
SREBF1-207ENST00000447641 KIFC2Q96AC6 838 aa16.54■□□□□ 0.24
SREBF1-207ENST00000447641 COA7Q96BR5 231 aa16.54■□□□□ 0.24
SREBF1-207ENST00000447641 TMEM87BQ96K49 555 aa16.54■□□□□ 0.24
SREBF1-207ENST00000447641 LY9Q9HBG7 655 aa16.54■□□□□ 0.24
SREBF1-207ENST00000447641 FRMPD3Q5JV73 1810 aa16.54■□□□□ 0.24
SREBF1-207ENST00000447641 LIFRP42702 1097 aa16.53■□□□□ 0.24
SREBF1-207ENST00000447641 FLT3LGP49771 235 aa16.53■□□□□ 0.24
SREBF1-207ENST00000447641 OAZ1P54368 228 aa16.53■□□□□ 0.24
SREBF1-207ENST00000447641 IRF5Q13568 498 aa16.53■□□□□ 0.24
SREBF1-207ENST00000447641 WTAPQ15007 396 aa16.53■□□□□ 0.24
SREBF1-207ENST00000447641 TMEM67Q5HYA8 995 aa16.53■□□□□ 0.24
SREBF1-207ENST00000447641 MORN1Q5T089 497 aa16.53■□□□□ 0.24
SREBF1-207ENST00000447641 GPATCH4Q5T3I0 446 aaKnown RBP16.53■□□□□ 0.24
SREBF1-207ENST00000447641 DHX32Q7L7V1 743 aaKnown RBP16.53■□□□□ 0.24
SREBF1-207ENST00000447641 GPR142Q7Z601 462 aa16.53■□□□□ 0.24
SREBF1-207ENST00000447641 RIOX2Q8IUF8 465 aa16.53■□□□□ 0.24
SREBF1-207ENST00000447641 TMTC2Q8N394 836 aa16.53■□□□□ 0.24
SREBF1-207ENST00000447641 CHMP4CQ96CF2 233 aa16.53■□□□□ 0.24
SREBF1-207ENST00000447641 PAK6Q9NQU5 681 aaPredicted RBP16.53■□□□□ 0.24
SREBF1-207ENST00000447641 GPHNQ9NQX3 736 aaPredicted RBP16.53■□□□□ 0.24
SREBF1-207ENST00000447641 BIN2Q9UBW5 565 aaPredicted RBP16.53■□□□□ 0.24
SREBF1-207ENST00000447641 PRR12Q9ULL5 1215 aa16.53■□□□□ 0.24
SREBF1-207ENST00000447641 MTMR7Q9Y216 660 aa16.53■□□□□ 0.24
SREBF1-207ENST00000447641 ZNFX1Q9P2E3 1918 aaKnown RBP16.53■□□□□ 0.24
SREBF1-207ENST00000447641 ERICH2A1L162 156 aa16.52■□□□□ 0.24
SREBF1-207ENST00000447641 SH2B2O14492 632 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-207ENST00000447641 ADCY3O60266 1144 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms