RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 PRELID1Q9Y255 219 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 ERBINQ96RT1 1412 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 UBE4BO95155 1302 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 GOLGA8CPA6NN73 597 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 O00370 1275 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 RTN2O75298 545 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 PMS2P54278 862 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 NUP107P57740 925 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 BICDL1Q6ZP65 573 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 VPS36Q86VN1 386 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 MCF2L2Q86YR7 1114 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 TMCO5AQ8N6Q1 288 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 TRIM11Q96F44 468 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 TSG101Q99816 390 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 IMPG2Q9BZV3 1241 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 YIPF3Q9GZM5 350 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 RAB17Q9H0T7 212 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 PALMDQ9NP74 551 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 BTBD7Q9P203 1132 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 FADS3Q9Y5Q0 445 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 GUCY1B2O75343 617 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 GNL1P36915 607 aaPredicted RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 TRPC3Q13507 836 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 PTK2BQ14289 1009 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 ESCO1Q5FWF5 840 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 LRIG3Q6UXM1 1119 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 KRT28Q7Z3Y7 464 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 FAM212AQ96EL1 285 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 NOD2Q9HC29 1040 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 SBNO2Q9Y2G9 1366 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 TSPY2A6NKD2 308 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 TRPA1O75762 1119 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 TSPY3P0CV98 308 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 TSPY8P0CW00 308 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 GFAPP14136 432 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 PRLRP16471 622 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 RPL26P61254 145 aaKnown RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 TSPY1Q01534 308 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 PRPF40BQ6NWY9 871 aaKnown RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 SYT2Q8N9I0 419 aaPredicted RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 VPS16Q9H269 839 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 PPCSQ9HAB8 311 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 EBF2Q9HAK2 575 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 ZC4H2Q9NQZ6 224 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 ZC3H13Q5T200 1668 aaKnown RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 FAM25EA8MYX2 175 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 HNRNPCL2B2RXH8 293 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 BTBD19C9JJ37 291 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 E7EVH7 732 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 NR1H3Q13133 447 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 EMC10Q5UCC4 262 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 CNKSR1Q969H4 720 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 WWC3Q9ULE0 1092 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 TSC22D4Q9Y3Q8 395 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 TCOF1Q13428 1488 aaKnown RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 KCNQ3O43525 872 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 RASSF9O75901 435 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 MAN1A1P33908 653 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 CYP4A11Q02928 519 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 TBC1D8BQ0IIM8 1120 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 PKD2Q13563 968 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 CYP4A22Q5TCH4 519 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 FAAH2Q6GMR7 532 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 PDXDC1Q6P996 788 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 SHQ1Q6PI26 577 aaKnown RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 LRRC31Q6UY01 552 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 TCP11L2Q8N4U5 519 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.2□□□□□ -1.9
CHD9-203ENST00000447540 CENPTQ96BT3 561 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 SH2D4AQ9H788 454 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 NR2E3Q9Y5X4 410 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 KDM5BQ9UGL1 1544 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 SBNO1A3KN83 1393 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 MCF2LO15068 1137 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 CLASP2O75122 1294 aaKnown RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 CIB2O75838 187 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 LSP1P33241 339 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ZBTB16Q05516 673 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 C8orf74Q6P047 294 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 PM20D2Q8IYS1 436 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 TSPYL6Q8N831 410 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 CCT8L2Q96SF2 557 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 USP16Q9Y5T5 823 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 PLB1Q6P1J6 1458 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ANKRD50Q9ULJ7 1429 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 STK10O94804 968 aaKnown RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 POTEIP0CG38 1075 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 XBP1P17861 261 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 UBXN1Q04323 297 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 EFHD2Q96C19 240 aaPredicted RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 FUCA2Q9BTY2 467 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 RTFDC1Q9BY42 306 aaPredicted RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 FHDC1Q9C0D6 1143 aaPredicted RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 BRD8Q9H0E9 1235 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 PIH1D3Q9NQM4 214 aaKnown RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 NSD3Q9BZ95 1437 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 SYCP2Q9BX26 1530 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 LAMC1P11047 1609 aa3.2□□□□□ -1.9
CHD9-203ENST00000447540 ACTN4O43707 911 aaKnown RBP3.2□□□□□ -1.9
CHD9-203ENST00000447540 MGRN1O60291 552 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms