RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 ZNF296Q8WUU4 475 aaPredicted RBP15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 TBC1D32Q96NH3 1257 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 ARHGAP39Q9C0H5 1083 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 UBA5Q9GZZ9 404 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 PDRG1Q9NUG6 133 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 MAD2L2Q9UI95 211 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 FEM1BQ9UK73 627 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 NAP1L2Q9ULW6 460 aaPredicted RBP15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 RBBP6Q7Z6E9 1792 aaKnown RBP15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 CTGFP29279 349 aa15.5■□□□□ 0.07
HLA-DOB-207ENST00000447394 STAT2P52630 851 aa15.5■□□□□ 0.07
HLA-DOB-207ENST00000447394 Q3C1V9 767 aa15.5■□□□□ 0.07
HLA-DOB-207ENST00000447394 APOA5Q6Q788 366 aa15.5■□□□□ 0.07
HLA-DOB-207ENST00000447394 CATIPQ7Z7H3 387 aa15.5■□□□□ 0.07
HLA-DOB-207ENST00000447394 CD99L2Q8TCZ2 262 aa15.5■□□□□ 0.07
HLA-DOB-207ENST00000447394 MTA3Q9BTC8 594 aa15.5■□□□□ 0.07
HLA-DOB-207ENST00000447394 PRR12Q9ULL5 1215 aa15.5■□□□□ 0.07
HLA-DOB-207ENST00000447394 ZNFX1Q9P2E3 1918 aaKnown RBP15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 VWA5AO00534 786 aa15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 DDAH1O94760 285 aa15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 PLEKHA8P1O95397 391 aa15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 PARP1P09874 1014 aaKnown RBP15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 TMEM132BQ14DG7 1078 aa15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 SYDE2Q5VT97 1194 aa15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 LBX2Q6XYB7 198 aa15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 NBPF11Q86T75 865 aa15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 SGMS1Q86VZ5 419 aa15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 CMTR1Q8N1G2 835 aaKnown RBP15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 REPS2Q8NFH8 660 aa15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 AGXT2Q9BYV1 514 aa15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 UPF2Q9HAU5 1272 aaKnown RBP15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 SLC12A7Q9Y666 1083 aa15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 LCTP09848 1927 aa15.49■□□□□ 0.07
HLA-DOB-207ENST00000447394 MYPNQ86TC9 1320 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 GOLGA8BA8MQT2 603 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 GCLCP48506 637 aaPredicted RBP15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 CTCFP49711 727 aaPredicted RBP15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 NEK4P51957 841 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 AK2P54819 239 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 ERVK-9P63128 1117 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 ERVK-24P63145 666 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 PLS1Q14651 629 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 ASPRV1Q53RT3 343 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 CCDC174Q6PII3 467 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 FAM160B2Q86V87 743 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 PRPF38AQ8NAV1 312 aaKnown RBP15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 PORCNQ9H237 461 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 RAVER2Q9HCJ3 691 aaKnown RBP15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 HOXC10Q9NYD6 342 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 MORF4L1Q9UBU8 362 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 ADAMTS5Q9UNA0 930 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 HPS5Q9UPZ3 1129 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 PLXNA1Q9UIW2 1896 aa15.48■□□□□ 0.07
HLA-DOB-207ENST00000447394 PALM3A6NDB9 673 aaPredicted RBP15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 GOLGA8AA7E2F4 631 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 KLRF2D3W0D1 207 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 ZBTB43O43298 467 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 DTNBO60941 627 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 FKTNO75072 461 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 LARGE1O95461 756 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 SLC4A3P48751 1232 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 SP3Q02447 781 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 FAM110CQ1W6H9 321 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 GPATCH4Q5T3I0 446 aaKnown RBP15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 BTNL9Q6UXG8 535 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 ADGRF4Q8IZF3 695 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 CPXCR1Q8N123 301 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 PIBF1Q8WXW3 757 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 VAT1LQ9HCJ6 419 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 RABGAP1Q9Y3P9 1069 aa15.47■□□□□ 0.07
HLA-DOB-207ENST00000447394 ZNF536O15090 1300 aa15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 CYTH3O43739 400 aa15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 DHX16O60231 1041 aaKnown RBP15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 PPFIA3O75145 1194 aa15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 CDC27P30260 824 aa15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 LACTBP83111 547 aaPredicted RBP15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 STK3Q13188 491 aa15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 TMTC2Q8N394 836 aa15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 GPRC5AQ8NFJ5 357 aa15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 CTCFLQ8NI51 663 aaPredicted RBP15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 CHURC1Q8WUH1 139 aa15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 TRIM47Q96LD4 638 aa15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 AGBL1Q96MI9 1066 aa15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 MOV10L1Q9BXT6 1211 aaKnown RBP15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 EFCC1Q9HA90 598 aa15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 SLC38A10Q9HBR0 1119 aa15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 NCOA5Q9HCD5 579 aaKnown RBP15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 FAM217BQ9NTX9 383 aaPredicted RBP15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 ZNF214Q9UL59 606 aaPredicted RBP15.46■□□□□ 0.07
HLA-DOB-207ENST00000447394 hCG_1642624A0A1W2PR95 340 aa15.45■□□□□ 0.06
HLA-DOB-207ENST00000447394 PLA2G6O60733 806 aa15.45■□□□□ 0.06
HLA-DOB-207ENST00000447394 PDIA3P30101 505 aaKnown RBP15.45■□□□□ 0.06
HLA-DOB-207ENST00000447394 CCT2P78371 535 aaKnown RBP15.45■□□□□ 0.06
HLA-DOB-207ENST00000447394 FBXL16Q8N461 479 aa15.45■□□□□ 0.06
HLA-DOB-207ENST00000447394 CCDC82Q8N4S0 544 aa15.45■□□□□ 0.06
HLA-DOB-207ENST00000447394 SRBD1Q8N5C6 995 aaKnown RBP15.45■□□□□ 0.06
HLA-DOB-207ENST00000447394 SPATC1LQ9H0A9 340 aa15.45■□□□□ 0.06
HLA-DOB-207ENST00000447394 RANBP17Q9H2T7 1088 aaKnown RBP15.45■□□□□ 0.06
HLA-DOB-207ENST00000447394 JMJD4Q9H9V9 463 aa15.45■□□□□ 0.06
HLA-DOB-207ENST00000447394 TPCN1Q9ULQ1 816 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms