RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 SNRNP48Q6IEG0 339 aaKnown RBP29.21■■■□□ 2.27
PMS1-214ENST00000446877 ANKRD33Q7Z3H0 272 aa29.21■■■□□ 2.27
PMS1-214ENST00000446877 PUS7LQ9H0K6 701 aaKnown RBP29.21■■■□□ 2.27
PMS1-214ENST00000446877 COG6Q9Y2V7 657 aa29.21■■■□□ 2.27
PMS1-214ENST00000446877 MOXD2PA6NHM9 499 aa29.2■■■□□ 2.26
PMS1-214ENST00000446877 SLC4A3P48751 1232 aa29.2■■■□□ 2.26
PMS1-214ENST00000446877 PRPF38AQ8NAV1 312 aaKnown RBP29.2■■■□□ 2.26
PMS1-214ENST00000446877 NUP88Q99567 741 aaPredicted RBP29.2■■■□□ 2.26
PMS1-214ENST00000446877 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.2■■■□□ 2.26
PMS1-214ENST00000446877 ZHX1Q9UKY1 873 aaPredicted RBP29.2■■■□□ 2.26
PMS1-214ENST00000446877 SYNGAP1Q96PV0 1343 aa29.2■■■□□ 2.26
PMS1-214ENST00000446877 F5H6K3 240 aa29.19■■■□□ 2.26
PMS1-214ENST00000446877 ZBED4O75132 1171 aa29.19■■■□□ 2.26
PMS1-214ENST00000446877 KLRC3Q07444 240 aa29.19■■■□□ 2.26
PMS1-214ENST00000446877 FAAP100Q0VG06 881 aa29.19■■■□□ 2.26
PMS1-214ENST00000446877 SYNRGQ9UMZ2 1314 aa29.19■■■□□ 2.26
PMS1-214ENST00000446877 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.18■■■□□ 2.26
PMS1-214ENST00000446877 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.18■■■□□ 2.26
PMS1-214ENST00000446877 KCNA10Q16322 511 aa29.18■■■□□ 2.26
PMS1-214ENST00000446877 NYAP2Q9P242 653 aa29.18■■■□□ 2.26
PMS1-214ENST00000446877 DUSP11O75319 330 aaKnown RBP29.17■■■□□ 2.26
PMS1-214ENST00000446877 SNAI1O95863 264 aaPredicted RBP29.17■■■□□ 2.26
PMS1-214ENST00000446877 MAMDC4Q6UXC1 1216 aa29.17■■■□□ 2.26
PMS1-214ENST00000446877 CPXCR1Q8N123 301 aa29.17■■■□□ 2.26
PMS1-214ENST00000446877 STK11IPQ8N1F8 1099 aa29.17■■■□□ 2.26
PMS1-214ENST00000446877 KLHDC9Q8NEP7 349 aa29.17■■■□□ 2.26
PMS1-214ENST00000446877 GLT1D1Q96MS3 346 aa29.17■■■□□ 2.26
PMS1-214ENST00000446877 STRBPQ96SI9 672 aaKnown RBP29.17■■■□□ 2.26
PMS1-214ENST00000446877 SPC25Q9HBM1 224 aa29.17■■■□□ 2.26
PMS1-214ENST00000446877 RIPK3Q9Y572 518 aa29.17■■■□□ 2.26
PMS1-214ENST00000446877 CDH23Q9H251 3354 aa29.16■■■□□ 2.26
PMS1-214ENST00000446877 MINDY4BA8MYZ0 360 aa29.16■■■□□ 2.26
PMS1-214ENST00000446877 NDUFB10O96000 172 aa29.16■■■□□ 2.26
PMS1-214ENST00000446877 TIMP1P01033 207 aa29.16■■■□□ 2.26
PMS1-214ENST00000446877 RASA1P20936 1047 aa29.16■■■□□ 2.26
PMS1-214ENST00000446877 SBK1Q52WX2 424 aa29.16■■■□□ 2.26
PMS1-214ENST00000446877 ZNF467Q7Z7K2 595 aaPredicted RBP29.16■■■□□ 2.26
PMS1-214ENST00000446877 SYMPKQ92797 1274 aaKnown RBP29.16■■■□□ 2.26
PMS1-214ENST00000446877 VTI1AQ96AJ9 217 aa29.16■■■□□ 2.26
PMS1-214ENST00000446877 LRRCC1Q9C099 1032 aa29.16■■■□□ 2.26
PMS1-214ENST00000446877 SMCHD1A6NHR9 2005 aa29.16■■■□□ 2.26
PMS1-214ENST00000446877 GIMAP6Q6P9H5 292 aa29.15■■■□□ 2.26
PMS1-214ENST00000446877 CCDC174Q6PII3 467 aa29.15■■■□□ 2.26
PMS1-214ENST00000446877 PCSK9Q8NBP7 692 aaKnown RBP29.15■■■□□ 2.26
PMS1-214ENST00000446877 CLIP2Q9UDT6 1046 aa29.15■■■□□ 2.26
PMS1-214ENST00000446877 MROH7Q68CQ1 1323 aa29.15■■■□□ 2.26
PMS1-214ENST00000446877 DNAJC25-GNG10A0A024R161 153 aa29.14■■■□□ 2.26
PMS1-214ENST00000446877 ATP2A1O14983 1001 aa29.14■■■□□ 2.26
PMS1-214ENST00000446877 DNAJB2P25686 324 aa29.14■■■□□ 2.26
PMS1-214ENST00000446877 ACVR2BQ13705 512 aa29.14■■■□□ 2.26
PMS1-214ENST00000446877 ANKRD35Q8N283 1001 aa29.14■■■□□ 2.26
PMS1-214ENST00000446877 KIFC2Q96AC6 838 aa29.14■■■□□ 2.26
PMS1-214ENST00000446877 ZNF287Q9HBT7 754 aa29.14■■■□□ 2.26
PMS1-214ENST00000446877 ELP1O95163 1332 aa29.14■■■□□ 2.25
PMS1-214ENST00000446877 C6orf222P0C671 652 aaPredicted RBP29.13■■■□□ 2.25
PMS1-214ENST00000446877 GRIN2CQ14957 1233 aa29.13■■■□□ 2.25
PMS1-214ENST00000446877 CCSAPQ6IQ19 270 aaPredicted RBP29.13■■■□□ 2.25
PMS1-214ENST00000446877 ZNF444Q8N0Y2 327 aaPredicted RBP29.13■■■□□ 2.25
PMS1-214ENST00000446877 FBXO40Q9UH90 709 aa29.13■■■□□ 2.25
PMS1-214ENST00000446877 MYH8P13535 1937 aa29.13■■■□□ 2.25
PMS1-214ENST00000446877 BAZ2AQ9UIF9 1905 aaKnown RBP29.13■■■□□ 2.25
PMS1-214ENST00000446877 ZNFX1Q9P2E3 1918 aaKnown RBP29.12■■■□□ 2.25
PMS1-214ENST00000446877 GSG1L2A8MUP6 293 aa29.12■■■□□ 2.25
PMS1-214ENST00000446877 MFSD5Q6N075 450 aa29.12■■■□□ 2.25
PMS1-214ENST00000446877 ABHD16BQ9H3Z7 469 aa29.12■■■□□ 2.25
PMS1-214ENST00000446877 RAVER2Q9HCJ3 691 aaKnown RBP29.12■■■□□ 2.25
PMS1-214ENST00000446877 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.12■■■□□ 2.25
PMS1-214ENST00000446877 TBX21Q9UL17 535 aa29.12■■■□□ 2.25
PMS1-214ENST00000446877 CST5P28325 142 aaPredicted RBP29.11■■■□□ 2.25
PMS1-214ENST00000446877 PPIGQ13427 754 aaKnown RBP eCLIP29.11■■■□□ 2.25
PMS1-214ENST00000446877 TIFAQ96CG3 184 aa29.11■■■□□ 2.25
PMS1-214ENST00000446877 ECHDC1Q9NTX5 307 aa29.11■■■□□ 2.25
PMS1-214ENST00000446877 FEM1BQ9UK73 627 aa29.11■■■□□ 2.25
PMS1-214ENST00000446877 SPTBN5Q9NRC6 3674 aaKnown RBP29.11■■■□□ 2.25
PMS1-214ENST00000446877 MYADML2A6NDP7 307 aa29.1■■■□□ 2.25
PMS1-214ENST00000446877 SMARCA5O60264 1052 aaPredicted RBP29.1■■■□□ 2.25
PMS1-214ENST00000446877 CCDC144BQ3MJ40 725 aa29.1■■■□□ 2.25
PMS1-214ENST00000446877 GNASQ5JWF2 1037 aa29.1■■■□□ 2.25
PMS1-214ENST00000446877 CHST13Q8NET6 341 aa29.1■■■□□ 2.25
PMS1-214ENST00000446877 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.1■■■□□ 2.25
PMS1-214ENST00000446877 ZNF576Q9H609 170 aa29.1■■■□□ 2.25
PMS1-214ENST00000446877 SLC38A10Q9HBR0 1119 aa29.1■■■□□ 2.25
PMS1-214ENST00000446877 APPP05067 770 aa29.09■■■□□ 2.25
PMS1-214ENST00000446877 ASGR1P07306 291 aa29.09■■■□□ 2.25
PMS1-214ENST00000446877 TDO2P48775 406 aa29.09■■■□□ 2.25
PMS1-214ENST00000446877 CDK7P50613 346 aa29.09■■■□□ 2.25
PMS1-214ENST00000446877 MIER1Q8N108 512 aa29.09■■■□□ 2.25
PMS1-214ENST00000446877 TMEM199Q8N511 208 aa29.09■■■□□ 2.25
PMS1-214ENST00000446877 COL11A1P12107 1806 aaPredicted RBP29.08■■■□□ 2.25
PMS1-214ENST00000446877 PARP14Q460N5 1801 aa29.08■■■□□ 2.25
PMS1-214ENST00000446877 A0A0U1RQG5 324 aaPredicted RBP29.08■■■□□ 2.25
PMS1-214ENST00000446877 GNAT2P19087 354 aa29.08■■■□□ 2.25
PMS1-214ENST00000446877 OAZ1P54368 228 aa29.08■■■□□ 2.25
PMS1-214ENST00000446877 GJA9P57773 515 aa29.08■■■□□ 2.25
PMS1-214ENST00000446877 CCDC129Q6ZRS4 1044 aa29.08■■■□□ 2.25
PMS1-214ENST00000446877 KBTBD3Q8NAB2 608 aa29.08■■■□□ 2.25
PMS1-214ENST00000446877 APPBP2Q92624 585 aa29.08■■■□□ 2.25
PMS1-214ENST00000446877 MKL1Q969V6 931 aa29.08■■■□□ 2.25
PMS1-214ENST00000446877 GPATCH3Q96I76 525 aa29.08■■■□□ 2.25
PMS1-214ENST00000446877 ARVCFO00192 962 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms