RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 MRPL44Q9H9J2 332 aaKnown RBP8.66□□□□□ -1.02
SMG1-202ENST00000446231 KNL1Q8NG31 2342 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 CHGBP05060 677 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 CCDC105Q8IYK2 499 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 ZBED6P86452 979 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 ZFATQ9P243 1243 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 G3BP2Q9UN86 482 aaKnown RBP8.66□□□□□ -1.02
SMG1-202ENST00000446231 NDUFB9Q9Y6M9 179 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 EPB41P11171 864 aaKnown RBP8.66□□□□□ -1.02
SMG1-202ENST00000446231 PLCB3Q01970 1234 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 CWF19L2Q2TBE0 894 aaKnown RBP8.66□□□□□ -1.02
SMG1-202ENST00000446231 LMBR1LQ6UX01 489 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 ABCF2Q9UG63 623 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 SPOPO43791 374 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 RFC1P35251 1148 aaPredicted RBP8.65□□□□□ -1.02
SMG1-202ENST00000446231 PDE6CP51160 858 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 COPS6Q7L5N1 327 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 PDCD7Q8N8D1 485 aaKnown RBP8.65□□□□□ -1.02
SMG1-202ENST00000446231 MAGEB6Q8N7X4 407 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 UHMK1Q8TAS1 419 aaKnown RBP8.65□□□□□ -1.02
SMG1-202ENST00000446231 ARHGAP42A6NI28 874 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 PHF20L1A8MW92 1017 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 PPP2R2AP63151 447 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 KBTBD3Q8NAB2 608 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 ASIC3Q9UHC3 531 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 EP400NLQ6ZTU2 488 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 ZBTB10Q96DT7 871 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 TOB2Q14106 344 aaPredicted RBP8.65□□□□□ -1.02
SMG1-202ENST00000446231 ANKLE2Q86XL3 938 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 ATP8A1Q9Y2Q0 1164 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 BUB1O43683 1085 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 SNUPNO95149 360 aaKnown RBP8.65□□□□□ -1.02
SMG1-202ENST00000446231 NAA35Q5VZE5 725 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 STXBP4Q6ZWJ1 553 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 ELAC2Q9BQ52 826 aaKnown RBP8.65□□□□□ -1.02
SMG1-202ENST00000446231 ADCY9O60503 1353 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 MOCS3O95396 460 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 ZNF589Q86UQ0 364 aaPredicted RBP8.65□□□□□ -1.02
SMG1-202ENST00000446231 NHEJ1Q9H9Q4 299 aaPredicted RBP8.65□□□□□ -1.02
SMG1-202ENST00000446231 FAM107AO95990 144 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMG1-202ENST00000446231 ANKRD20A3Q5VUR7 823 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 hCG_2014768A0A024R1R8 64 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 PPP6R2O75170 966 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 RABGAP1Q9Y3P9 1069 aa8.65□□□□□ -1.02
SMG1-202ENST00000446231 ST13P4Q8IZP2 240 aaPredicted RBP8.65□□□□□ -1.03
SMG1-202ENST00000446231 ARHGAP18Q8N392 663 aa8.65□□□□□ -1.03
SMG1-202ENST00000446231 STAMQ92783 540 aa8.65□□□□□ -1.03
SMG1-202ENST00000446231 AMFRQ9UKV5 643 aa8.65□□□□□ -1.03
SMG1-202ENST00000446231 HSPD1P10809 573 aaKnown RBP8.65□□□□□ -1.03
SMG1-202ENST00000446231 B4E1Z4 1266 aa8.65□□□□□ -1.03
SMG1-202ENST00000446231 NAPAP54920 295 aa8.65□□□□□ -1.03
SMG1-202ENST00000446231 LAMB3Q13751 1172 aa8.65□□□□□ -1.03
SMG1-202ENST00000446231 SUCLG2Q96I99 432 aa8.65□□□□□ -1.03
SMG1-202ENST00000446231 IRX2Q9BZI1 471 aaPredicted RBP8.65□□□□□ -1.03
SMG1-202ENST00000446231 SYNCQ9H7C4 482 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 RNASELQ05823 741 aaKnown RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 RASGRP2Q7LDG7 609 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 GAS8O95995 478 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 ADD1P35611 737 aaKnown RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 MIEF2Q96C03 454 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 FUCA2Q9BTY2 467 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 ABCA10Q8WWZ4 1543 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 hCG_1642624A0A1W2PR95 340 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 ZRANB2O95218 330 aaKnown RBP eCLIP8.64□□□□□ -1.036e-8■■■■■ 28
SMG1-202ENST00000446231 UQCRFS1P1P0C7P4 283 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 GPTP24298 496 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 PTGISQ16647 500 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 AP5Z1O43299 807 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 SCTRP47872 440 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 TIMM10P62072 90 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 KLHDC4Q8TBB5 520 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 NSMCE1Q8WV22 266 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 HAUS1Q96CS2 278 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 INTUQ9ULD6 942 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 CCND1P24385 295 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 U2AF1L4Q8WU68 220 aaKnown RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 RAD23BP54727 409 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 RBM43Q6ZSC3 357 aaKnown RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 SMYD4Q8IYR2 804 aaPredicted RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 NOA1Q8NC60 698 aaKnown RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 EDC3Q96F86 508 aaKnown RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 MCM8Q9UJA3 840 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 KDM5DQ9BY66 1539 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 AARSP49588 968 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMG1-202ENST00000446231 CTCFP49711 727 aaPredicted RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 TCP11X2Q5H9J9 407 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 DBNDD2Q9BQY9 259 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 DPH5Q9H2P9 285 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 ADCY8P40145 1251 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 PDE4DQ08499 809 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 ZNF473Q8WTR7 871 aaKnown RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 SYMPKQ92797 1274 aaKnown RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 MMS19Q96T76 1030 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 KCND1Q9NSA2 647 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 TCP11X1B4DZS4 312 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 PDE4BQ07343 736 aa8.64□□□□□ -1.03
SMG1-202ENST00000446231 DCAF17Q5H9S7 520 aaPredicted RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 MRRFQ96E11 262 aaKnown RBP8.64□□□□□ -1.03
SMG1-202ENST00000446231 CSRNP2Q9H175 543 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms