RNA–Protein interactions for RNA: ENST00000445605.5

FAM49A-203, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 4

Gene FAM49A, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-203ENST00000445605 CCDC174Q6PII3 467 aa20.65■□□□□ 0.9
FAM49A-203ENST00000445605 PANK1Q8TE04 598 aa20.65■□□□□ 0.9
FAM49A-203ENST00000445605 TIFAQ96CG3 184 aa20.65■□□□□ 0.9
FAM49A-203ENST00000445605 TEX13BQ9BXU2 312 aa20.65■□□□□ 0.9
FAM49A-203ENST00000445605 ZHX1Q9UKY1 873 aaPredicted RBP20.65■□□□□ 0.9
FAM49A-203ENST00000445605 CTDP1Q9Y5B0 961 aaPredicted RBP20.65■□□□□ 0.9
FAM49A-203ENST00000445605 TTC28Q96AY4 2481 aa20.64■□□□□ 0.9
FAM49A-203ENST00000445605 MROH7Q68CQ1 1323 aa20.64■□□□□ 0.89
FAM49A-203ENST00000445605 SYNGAP1Q96PV0 1343 aa20.64■□□□□ 0.89
FAM49A-203ENST00000445605 HMMRO75330 724 aa20.64■□□□□ 0.89
FAM49A-203ENST00000445605 SNRNP48Q6IEG0 339 aaKnown RBP20.64■□□□□ 0.89
FAM49A-203ENST00000445605 CCDC129Q6ZRS4 1044 aa20.64■□□□□ 0.89
FAM49A-203ENST00000445605 REPS2Q8NFH8 660 aa20.64■□□□□ 0.89
FAM49A-203ENST00000445605 GLT1D1Q96MS3 346 aa20.64■□□□□ 0.89
FAM49A-203ENST00000445605 SLF1Q9BQI6 1058 aa20.64■□□□□ 0.89
FAM49A-203ENST00000445605 PPIGQ13427 754 aaKnown RBP eCLIP20.63■□□□□ 0.89
FAM49A-203ENST00000445605 PCSK9Q8NBP7 692 aaKnown RBP20.63■□□□□ 0.89
FAM49A-203ENST00000445605 KLHDC9Q8NEP7 349 aa20.63■□□□□ 0.89
FAM49A-203ENST00000445605 GAS2L1Q99501 681 aaPredicted RBP20.63■□□□□ 0.89
FAM49A-203ENST00000445605 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.63■□□□□ 0.89
FAM49A-203ENST00000445605 SPC25Q9HBM1 224 aa20.63■□□□□ 0.89
FAM49A-203ENST00000445605 ELP1O95163 1332 aa20.62■□□□□ 0.89
FAM49A-203ENST00000445605 DUSP11O75319 330 aaKnown RBP20.62■□□□□ 0.89
FAM49A-203ENST00000445605 SNAI1O95863 264 aaPredicted RBP20.62■□□□□ 0.89
FAM49A-203ENST00000445605 C6orf222P0C671 652 aaPredicted RBP20.62■□□□□ 0.89
FAM49A-203ENST00000445605 MFSD5Q6N075 450 aa20.62■□□□□ 0.89
FAM49A-203ENST00000445605 CTR9Q6PD62 1173 aa20.62■□□□□ 0.89
FAM49A-203ENST00000445605 RPAP2Q8IXW5 612 aaPredicted RBP20.62■□□□□ 0.89
FAM49A-203ENST00000445605 USP38Q8NB14 1042 aa20.62■□□□□ 0.89
FAM49A-203ENST00000445605 PPM1EQ8WY54 764 aa20.62■□□□□ 0.89
FAM49A-203ENST00000445605 NUP88Q99567 741 aaPredicted RBP20.62■□□□□ 0.89
FAM49A-203ENST00000445605 CDH23Q9H251 3354 aa20.62■□□□□ 0.89
FAM49A-203ENST00000445605 MYO9BQ13459 2157 aa20.61■□□□□ 0.89
FAM49A-203ENST00000445605 RAB11FIP3O75154 756 aa20.61■□□□□ 0.89
FAM49A-203ENST00000445605 ATP5JP18859 108 aa20.61■□□□□ 0.89
FAM49A-203ENST00000445605 UBE3CQ15386 1083 aa20.61■□□□□ 0.89
FAM49A-203ENST00000445605 ZSCAN25Q6NSZ9 544 aa20.61■□□□□ 0.89
FAM49A-203ENST00000445605 MAMDC4Q6UXC1 1216 aa20.61■□□□□ 0.89
FAM49A-203ENST00000445605 CPXCR1Q8N123 301 aa20.61■□□□□ 0.89
FAM49A-203ENST00000445605 TBX21Q9UL17 535 aa20.61■□□□□ 0.89
FAM49A-203ENST00000445605 MYH7P12883 1935 aa20.61■□□□□ 0.89
FAM49A-203ENST00000445605 TNFRSF10AO00220 468 aa20.6■□□□□ 0.89
FAM49A-203ENST00000445605 ZBED4O75132 1171 aa20.6■□□□□ 0.89
FAM49A-203ENST00000445605 ASGR1P07306 291 aa20.6■□□□□ 0.89
FAM49A-203ENST00000445605 HNRNPUQ00839 825 aaKnown RBP eCLIP20.6■□□□□ 0.89
FAM49A-203ENST00000445605 ACVR2BQ13705 512 aa20.6■□□□□ 0.89
FAM49A-203ENST00000445605 CCSAPQ6IQ19 270 aaPredicted RBP20.6■□□□□ 0.89
FAM49A-203ENST00000445605 STK11IPQ8N1F8 1099 aa20.6■□□□□ 0.89
FAM49A-203ENST00000445605 TMEM199Q8N511 208 aa20.6■□□□□ 0.89
FAM49A-203ENST00000445605 PRPF38AQ8NAV1 312 aaKnown RBP20.6■□□□□ 0.89
FAM49A-203ENST00000445605 HAUS7Q99871 368 aa20.6■□□□□ 0.89
FAM49A-203ENST00000445605 MKNK2Q9HBH9 465 aa20.6■□□□□ 0.89
FAM49A-203ENST00000445605 ARPP21Q9UBL0 812 aaPredicted RBP20.6■□□□□ 0.89
FAM49A-203ENST00000445605 RIPK3Q9Y572 518 aa20.6■□□□□ 0.89
FAM49A-203ENST00000445605 DNAJC25-GNG10A0A024R161 153 aa20.59■□□□□ 0.89
FAM49A-203ENST00000445605 MYADML2A6NDP7 307 aa20.59■□□□□ 0.89
FAM49A-203ENST00000445605 F5H6K3 240 aa20.59■□□□□ 0.89
FAM49A-203ENST00000445605 CHGBP05060 677 aa20.59■□□□□ 0.89
FAM49A-203ENST00000445605 MS4A1P11836 297 aa20.59■□□□□ 0.89
FAM49A-203ENST00000445605 KLRC3Q07444 240 aa20.59■□□□□ 0.89
FAM49A-203ENST00000445605 GNASQ5JWF2 1037 aa20.59■□□□□ 0.89
FAM49A-203ENST00000445605 TMEM240Q5SV17 173 aa20.59■□□□□ 0.89
FAM49A-203ENST00000445605 ZNF467Q7Z7K2 595 aaPredicted RBP20.59■□□□□ 0.89
FAM49A-203ENST00000445605 ANKRD35Q8N283 1001 aa20.59■□□□□ 0.89
FAM49A-203ENST00000445605 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.59■□□□□ 0.89
FAM49A-203ENST00000445605 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.59■□□□□ 0.89
FAM49A-203ENST00000445605 ZBED9Q6R2W3 1325 aa20.58■□□□□ 0.89
FAM49A-203ENST00000445605 A0A0U1RQG5 324 aaPredicted RBP20.58■□□□□ 0.89
FAM49A-203ENST00000445605 GRXCR1A8MXD5 290 aa20.58■□□□□ 0.89
FAM49A-203ENST00000445605 ARVCFO00192 962 aa20.58■□□□□ 0.89
FAM49A-203ENST00000445605 TLR3O15455 904 aaKnown RBP20.58■□□□□ 0.89
FAM49A-203ENST00000445605 CSF2RAP15509 400 aa20.58■□□□□ 0.89
FAM49A-203ENST00000445605 CST5P28325 142 aaPredicted RBP20.58■□□□□ 0.89
FAM49A-203ENST00000445605 PBX2P40425 430 aa20.58■□□□□ 0.89
FAM49A-203ENST00000445605 CDK7P50613 346 aa20.58■□□□□ 0.89
FAM49A-203ENST00000445605 CCDC144BQ3MJ40 725 aa20.58■□□□□ 0.89
FAM49A-203ENST00000445605 PBX4Q9BYU1 374 aa20.58■□□□□ 0.89
FAM49A-203ENST00000445605 PPP1R12CQ9BZL4 782 aa20.58■□□□□ 0.89
FAM49A-203ENST00000445605 PUS7LQ9H0K6 701 aaKnown RBP20.58■□□□□ 0.89
FAM49A-203ENST00000445605 ABHD16BQ9H3Z7 469 aa20.58■□□□□ 0.89
FAM49A-203ENST00000445605 NYAP2Q9P242 653 aa20.58■□□□□ 0.89
FAM49A-203ENST00000445605 MCM3APO60318 1980 aa20.57■□□□□ 0.88
FAM49A-203ENST00000445605 NDUFB10O96000 172 aa20.57■□□□□ 0.88
FAM49A-203ENST00000445605 ACRP10323 421 aa20.57■□□□□ 0.88
FAM49A-203ENST00000445605 IRX5P78411 483 aaPredicted RBP20.57■□□□□ 0.88
FAM49A-203ENST00000445605 C16orf59Q7L2K0 433 aa20.57■□□□□ 0.88
FAM49A-203ENST00000445605 KIFC2Q96AC6 838 aa20.57■□□□□ 0.88
FAM49A-203ENST00000445605 PRDM12Q9H4Q4 367 aa20.57■□□□□ 0.88
FAM49A-203ENST00000445605 RAVER2Q9HCJ3 691 aaKnown RBP20.57■□□□□ 0.88
FAM49A-203ENST00000445605 SPTBN5Q9NRC6 3674 aaKnown RBP20.57■□□□□ 0.88
FAM49A-203ENST00000445605 CLIP2Q9UDT6 1046 aa20.57■□□□□ 0.88
FAM49A-203ENST00000445605 MINDY4BA8MYZ0 360 aa20.56■□□□□ 0.88
FAM49A-203ENST00000445605 ATP2A1O14983 1001 aa20.56■□□□□ 0.88
FAM49A-203ENST00000445605 RASA1P20936 1047 aa20.56■□□□□ 0.88
FAM49A-203ENST00000445605 GJA9P57773 515 aa20.56■□□□□ 0.88
FAM49A-203ENST00000445605 PSRC1Q6PGN9 363 aaPredicted RBP20.56■□□□□ 0.88
FAM49A-203ENST00000445605 ZNF365Q70YC5 407 aa20.56■□□□□ 0.88
FAM49A-203ENST00000445605 UPF3AQ9H1J1 476 aaKnown RBP20.56■□□□□ 0.88
FAM49A-203ENST00000445605 FBXO40Q9UH90 709 aa20.56■□□□□ 0.88
FAM49A-203ENST00000445605 MSRAQ9UJ68 235 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms