RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 GTPBP6O43824 516 aaPredicted RBP11.04□□□□□ -0.64
LINC00642-203ENST00000444942 GFRA3O60609 400 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 NPM3O75607 178 aaKnown RBP11.04□□□□□ -0.64
LINC00642-203ENST00000444942 TIMP1P01033 207 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 IGHA2P01877 340 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 APPP05067 770 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 CYP2C19P33261 490 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 ERVK-9P63128 1117 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 ERVK-24P63145 666 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 IRX3P78415 501 aaPredicted RBP11.04□□□□□ -0.64
LINC00642-203ENST00000444942 PPIGQ13427 754 aaKnown RBP eCLIP11.04□□□□□ -0.64
LINC00642-203ENST00000444942 RRP1BQ14684 758 aaKnown RBP11.04□□□□□ -0.64
LINC00642-203ENST00000444942 LRRC41Q15345 812 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 SHROOM1Q2M3G4 852 aaPredicted RBP11.04□□□□□ -0.64
LINC00642-203ENST00000444942 SH3D19Q5HYK7 790 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 MFSD5Q6N075 450 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 CERS3Q8IU89 383 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 FAM178BQ8IXR5 827 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 ZNF280CQ8ND82 737 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 ANKS1AQ92625 1134 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 EVI5LQ96CN4 794 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 DHX36Q9H2U1 1008 aaKnown RBP11.04□□□□□ -0.64
LINC00642-203ENST00000444942 UPF2Q9HAU5 1272 aaKnown RBP11.04□□□□□ -0.64
LINC00642-203ENST00000444942 PI4KBQ9UBF8 816 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 PHF24Q9UPV7 400 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 CHD8Q9HCK8 2581 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 FAM186AA6NE01 2351 aa11.04□□□□□ -0.64
LINC00642-203ENST00000444942 GPAA1O43292 621 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 PQBP1O60828 265 aaKnown RBP11.03□□□□□ -0.64
LINC00642-203ENST00000444942 GDF11O95390 407 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 MYCNP04198 464 aaPredicted RBP11.03□□□□□ -0.64
LINC00642-203ENST00000444942 ZFYP08048 801 aaPredicted RBP11.03□□□□□ -0.64
LINC00642-203ENST00000444942 HOXC6P09630 235 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 PLCD1P51178 756 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 HERVK_113P62684 666 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 FAAP100Q0VG06 881 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 LRRFIP1Q32MZ4 808 aaKnown RBP11.03□□□□□ -0.64
LINC00642-203ENST00000444942 ANO1Q5XXA6 986 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 PPP2R2DQ66LE6 453 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 PSRC1Q6PGN9 363 aaPredicted RBP11.03□□□□□ -0.64
LINC00642-203ENST00000444942 ZNF365Q70YC5 407 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 PRSS33Q8NF86 280 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 DCP1AQ9NPI6 582 aaPredicted RBP11.03□□□□□ -0.64
LINC00642-203ENST00000444942 HOXA7P31268 230 aaPredicted RBP11.03□□□□□ -0.64
LINC00642-203ENST00000444942 PTPN5P54829 565 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 ZMYM1Q5SVZ6 1142 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 TMED8Q6PL24 325 aaPredicted RBP11.03□□□□□ -0.64
LINC00642-203ENST00000444942 ANKRD33Q7Z3H0 272 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 TTC6Q86TZ1 520 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 DYNLL2Q96FJ2 89 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 FAM227BQ96M60 508 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 TOX2Q96NM4 488 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 STRBPQ96SI9 672 aaKnown RBP11.03□□□□□ -0.64
LINC00642-203ENST00000444942 TBC1D2Q9BYX2 928 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 DNAJC18Q9H819 358 aa11.03□□□□□ -0.64
LINC00642-203ENST00000444942 MYO15AQ9UKN7 3530 aa11.02□□□□□ -0.64
LINC00642-203ENST00000444942 A0A0D9SFI3 127 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 POTEB3A0JP26 581 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 SLC15A5A6NIM6 579 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 MINDY4BA8MYZ0 360 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 USP17L12C9JPN9 530 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 USP17L21D6R901 530 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 SEPT4O43236 478 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 DCXO43602 365 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 TBC1D12O60347 775 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 NMIQ13287 307 aaPredicted RBP11.02□□□□□ -0.65
LINC00642-203ENST00000444942 TTC22Q5TAA0 569 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 POTEBQ6S5H4 581 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 HFE2Q6ZVN8 426 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 FOXP4Q8IVH2 680 aaPredicted RBP11.02□□□□□ -0.65
LINC00642-203ENST00000444942 MFSD14AQ96MC6 490 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 ANP32EQ9BTT0 268 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 OSBPL3Q9H4L5 887 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 CWC22Q9HCG8 908 aaKnown RBP11.02□□□□□ -0.65
LINC00642-203ENST00000444942 ATP8A2Q9NTI2 1148 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 HERC5Q9UII4 1024 aaKnown RBP11.02□□□□□ -0.65
LINC00642-203ENST00000444942 TBX21Q9UL17 535 aa11.02□□□□□ -0.65
LINC00642-203ENST00000444942 ZNF236Q9UL36 1845 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 CHD6Q8TD26 2715 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 TPRP12270 2363 aaKnown RBP11.01□□□□□ -0.65
LINC00642-203ENST00000444942 PLXNA3P51805 1871 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 ZFHX4Q86UP3 3567 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 GSG1L2A8MUP6 293 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 DCDC2CA8MYV0 355 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 RFXAPO00287 272 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 GSPT1P15170 499 aaKnown RBP11.01□□□□□ -0.65
LINC00642-203ENST00000444942 CSF2RAP15509 400 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 SSTR3P32745 418 aaPredicted RBP11.01□□□□□ -0.65
LINC00642-203ENST00000444942 CAP2P40123 477 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 TDO2P48775 406 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 JAG1P78504 1218 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 AMOTL1Q8IY63 956 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 NPLOC4Q8TAT6 608 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 SERPINB13Q9UIV8 391 aa11.01□□□□□ -0.65
LINC00642-203ENST00000444942 MPHOSPH10O00566 681 aaKnown RBP11□□□□□ -0.65
LINC00642-203ENST00000444942 RGS20O76081 388 aa11□□□□□ -0.65
LINC00642-203ENST00000444942 ACRP10323 421 aa11□□□□□ -0.65
LINC00642-203ENST00000444942 SDSP20132 328 aa11□□□□□ -0.65
LINC00642-203ENST00000444942 PTPREP23469 700 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms