RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 DPCR1Q3MIW9 517 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 SH3BP5LQ7L8J4 393 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 RASGRP2Q7LDG7 609 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 KRT25Q7Z3Z0 450 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 MKL1Q969V6 931 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 HDAC9Q9UKV0 1011 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 ARFGEF1Q9Y6D6 1849 aa21.5■■□□□ 1.03
SEMA3D-202ENST00000444867 PNOCQ13519 176 aa21.5■■□□□ 1.03
SEMA3D-202ENST00000444867 CERKLQ49MI3 558 aaPredicted RBP21.5■■□□□ 1.03
SEMA3D-202ENST00000444867 PIGSQ96S52 555 aa21.5■■□□□ 1.03
SEMA3D-202ENST00000444867 TRIM5Q9C035 493 aa21.5■■□□□ 1.03
SEMA3D-202ENST00000444867 TDRD3Q9H7E2 651 aaKnown RBP21.5■■□□□ 1.03
SEMA3D-202ENST00000444867 KANSL2Q9H9L4 492 aa21.5■■□□□ 1.03
SEMA3D-202ENST00000444867 TMOD2Q9NZR1 351 aa21.5■■□□□ 1.03
SEMA3D-202ENST00000444867 NYAP2Q9P242 653 aa21.5■■□□□ 1.03
SEMA3D-202ENST00000444867 SMTNL1A8MU46 457 aa21.49■■□□□ 1.03
SEMA3D-202ENST00000444867 ADAMTS3O15072 1205 aa21.49■■□□□ 1.03
SEMA3D-202ENST00000444867 ACTN4O43707 911 aaKnown RBP21.49■■□□□ 1.03
SEMA3D-202ENST00000444867 POSTNQ15063 836 aa21.49■■□□□ 1.03
SEMA3D-202ENST00000444867 PPP1R18Q6NYC8 613 aa21.49■■□□□ 1.03
SEMA3D-202ENST00000444867 HOMER1Q86YM7 354 aa21.49■■□□□ 1.03
SEMA3D-202ENST00000444867 AOPEPQ8N6M6 819 aa21.49■■□□□ 1.03
SEMA3D-202ENST00000444867 GMLQ99445 158 aa21.49■■□□□ 1.03
SEMA3D-202ENST00000444867 CPVLQ9H3G5 476 aa21.49■■□□□ 1.03
SEMA3D-202ENST00000444867 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.49■■□□□ 1.03
SEMA3D-202ENST00000444867 SERTAD1Q9UHV2 236 aa21.49■■□□□ 1.03
SEMA3D-202ENST00000444867 FRMPD2Q68DX3 1309 aaPredicted RBP21.49■■□□□ 1.03
SEMA3D-202ENST00000444867 BRCA1P38398 1863 aaKnown RBP21.49■■□□□ 1.03
SEMA3D-202ENST00000444867 SMCO2A6NFE2 343 aa21.48■■□□□ 1.03
SEMA3D-202ENST00000444867 LAD1O00515 517 aa21.48■■□□□ 1.03
SEMA3D-202ENST00000444867 MCM7P33993 719 aa21.48■■□□□ 1.03
SEMA3D-202ENST00000444867 EIF6P56537 245 aaKnown RBP21.48■■□□□ 1.03
SEMA3D-202ENST00000444867 TPM4P67936 248 aa21.48■■□□□ 1.03
SEMA3D-202ENST00000444867 ORC2Q13416 577 aaPredicted RBP21.48■■□□□ 1.03
SEMA3D-202ENST00000444867 NT5DC1Q5TFE4 455 aa21.48■■□□□ 1.03
SEMA3D-202ENST00000444867 TMEM179Q6ZVK1 233 aa21.48■■□□□ 1.03
SEMA3D-202ENST00000444867 SYMPKQ92797 1274 aaKnown RBP21.48■■□□□ 1.03
SEMA3D-202ENST00000444867 PRMT6Q96LA8 375 aaPredicted RBP21.48■■□□□ 1.03
SEMA3D-202ENST00000444867 UBA5Q9GZZ9 404 aa21.48■■□□□ 1.03
SEMA3D-202ENST00000444867 MTFR1LQ9H019 292 aa21.48■■□□□ 1.03
SEMA3D-202ENST00000444867 PIM2Q9P1W9 311 aa21.48■■□□□ 1.03
SEMA3D-202ENST00000444867 BIN1O00499 593 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 IKBKBO14920 756 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 ZNF500O60304 480 aaPredicted RBP21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 LONP1P36776 959 aaKnown RBP21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 C4orf32Q8N8J7 132 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 TRIML1Q8N9V2 468 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 DCAF4Q8WV16 495 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 VAT1LQ9HCJ6 419 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 COL4A5P29400 1685 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 FER1L6Q2WGJ9 1857 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 A0A087WWV3 80 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 VWA3AA6NCI4 1184 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 SPDYE2BA6NHP3 402 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 PSMD14O00487 310 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 SPDYE6P0CI01 402 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 CLEC10AQ8IUN9 316 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 RASGRP4Q8TDF6 673 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 MRFAP1L1Q96HT8 127 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 ZNF277Q9NRM2 450 aaPredicted RBP21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 ZNRF3Q9ULT6 936 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 PCDHA5Q9Y5H7 936 aa21.47■■□□□ 1.03
SEMA3D-202ENST00000444867 PNMA6FA0A0J9YX94 578 aa21.46■■□□□ 1.03
SEMA3D-202ENST00000444867 SLFN14P0C7P3 912 aa21.46■■□□□ 1.03
SEMA3D-202ENST00000444867 POLD1P28340 1107 aa21.46■■□□□ 1.03
SEMA3D-202ENST00000444867 NONOQ15233 471 aaKnown RBP eCLIP21.46■■□□□ 1.03
SEMA3D-202ENST00000444867 USP49Q70CQ1 688 aa21.46■■□□□ 1.03
SEMA3D-202ENST00000444867 NIM1KQ8IY84 436 aa21.46■■□□□ 1.03
SEMA3D-202ENST00000444867 OGFOD1Q8N543 542 aa21.46■■□□□ 1.03
SEMA3D-202ENST00000444867 AGBL3Q8NEM8 1001 aa21.46■■□□□ 1.03
SEMA3D-202ENST00000444867 SMARCE1Q969G3 411 aa21.46■■□□□ 1.03
SEMA3D-202ENST00000444867 GPCPD1Q9NPB8 672 aa21.46■■□□□ 1.03
SEMA3D-202ENST00000444867 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.46■■□□□ 1.03
SEMA3D-202ENST00000444867 PRPHP41219 470 aa21.45■■□□□ 1.02
SEMA3D-202ENST00000444867 SARSP49591 514 aaKnown RBP21.45■■□□□ 1.02
SEMA3D-202ENST00000444867 DLGAP5Q15398 846 aa21.45■■□□□ 1.02
SEMA3D-202ENST00000444867 PDILTQ8N807 584 aa21.45■■□□□ 1.02
SEMA3D-202ENST00000444867 MTMR14Q8NCE2 650 aa21.45■■□□□ 1.02
SEMA3D-202ENST00000444867 EPSTI1Q96J88 318 aa21.45■■□□□ 1.02
SEMA3D-202ENST00000444867 HERC5Q9UII4 1024 aaKnown RBP21.45■■□□□ 1.02
SEMA3D-202ENST00000444867 SYNPO2Q9UMS6 1093 aa21.45■■□□□ 1.02
SEMA3D-202ENST00000444867 RAD17O75943 681 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 SMC2O95347 1197 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 EEF2P13639 858 aaKnown RBP21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 ATP2B2Q01814 1243 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 INF2Q27J81 1249 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 CCDC96Q2M329 555 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 ABCB5Q2M3G0 1257 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 FKBP1CQ5VVH2 108 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 SH3RF1Q7Z6J0 888 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 ADGRF4Q8IZF3 695 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 REXO1Q8N1G1 1221 aaKnown RBP21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 SPATA20Q8TB22 786 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 MTMR8Q96EF0 704 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 JMJD4Q9H9V9 463 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 SPON1Q9HCB6 807 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 DACH1Q9UI36 760 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 MYO1BO43795 1136 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 TXLNAP40222 546 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 FAM151AQ8WW52 585 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms