RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 NCAPG2Q86XI2 1143 aa20.46■□□□□ 0.87
SMARCAL1-209ENST00000444508 MB21D2Q8IYB1 491 aaPredicted RBP20.46■□□□□ 0.87
SMARCAL1-209ENST00000444508 MROH8Q9H579 483 aa20.46■□□□□ 0.87
SMARCAL1-209ENST00000444508 ADCY3O60266 1144 aa20.45■□□□□ 0.86
SMARCAL1-209ENST00000444508 GRK4P32298 578 aa20.45■□□□□ 0.86
SMARCAL1-209ENST00000444508 COPB2P35606 906 aa20.45■□□□□ 0.86
SMARCAL1-209ENST00000444508 SLAIN1Q8ND83 568 aa20.45■□□□□ 0.86
SMARCAL1-209ENST00000444508 REPS2Q8NFH8 660 aa20.45■□□□□ 0.86
SMARCAL1-209ENST00000444508 ARMC5Q96C12 935 aa20.45■□□□□ 0.86
SMARCAL1-209ENST00000444508 TEX13BQ9BXU2 312 aa20.45■□□□□ 0.86
SMARCAL1-209ENST00000444508 SLC38A10Q9HBR0 1119 aa20.45■□□□□ 0.86
SMARCAL1-209ENST00000444508 GPCPD1Q9NPB8 672 aa20.45■□□□□ 0.86
SMARCAL1-209ENST00000444508 BIN2Q9UBW5 565 aaPredicted RBP20.45■□□□□ 0.86
SMARCAL1-209ENST00000444508 GJD2Q9UKL4 321 aa20.45■□□□□ 0.86
SMARCAL1-209ENST00000444508 ZNF214Q9UL59 606 aaPredicted RBP20.45■□□□□ 0.86
SMARCAL1-209ENST00000444508 FRMPD2Q68DX3 1309 aaPredicted RBP20.45■□□□□ 0.86
SMARCAL1-209ENST00000444508 SLC15A5A6NIM6 579 aa20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 SNHG28P0DPA3 235 aa20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 MCM5P33992 734 aa20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 RGS2P41220 211 aa20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 ZNF543Q08ER8 600 aa20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 WTAPQ15007 396 aa20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 SEC23AQ15436 765 aa20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 TMEM67Q5HYA8 995 aa20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 GPATCH4Q5T3I0 446 aaKnown RBP20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 SNRNP48Q6IEG0 339 aaKnown RBP20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 CHST3Q7LGC8 479 aa20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 RIOX2Q8IUF8 465 aa20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 CPXCR1Q8N123 301 aa20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 PXYLP1Q8TE99 480 aa20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 SH3TC2Q8TF17 1288 aa20.44■□□□□ 0.86
SMARCAL1-209ENST00000444508 ATP2A1O14983 1001 aa20.43■□□□□ 0.86
SMARCAL1-209ENST00000444508 STRNO43815 780 aa20.43■□□□□ 0.86
SMARCAL1-209ENST00000444508 PTPREP23469 700 aa20.43■□□□□ 0.86
SMARCAL1-209ENST00000444508 OAZ1P54368 228 aa20.43■□□□□ 0.86
SMARCAL1-209ENST00000444508 KRT32Q14532 448 aa20.43■□□□□ 0.86
SMARCAL1-209ENST00000444508 MORN1Q5T089 497 aa20.43■□□□□ 0.86
SMARCAL1-209ENST00000444508 IFFO2Q5TF58 517 aa20.43■□□□□ 0.86
SMARCAL1-209ENST00000444508 PRR12Q9ULL5 1215 aa20.43■□□□□ 0.86
SMARCAL1-209ENST00000444508 PLXNB2O15031 1838 aa20.43■□□□□ 0.86
SMARCAL1-209ENST00000444508 PRC1O43663 620 aa20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 CYP2B6P20813 491 aa20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 SLC16A2P36021 539 aa20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 SLC4A3P48751 1232 aa20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 ANTXR2P58335 489 aa20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 UBXN2AP68543 259 aa20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 MAP2K5Q13163 448 aa20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 GRB14Q14449 540 aa20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 SYDE2Q5VT97 1194 aa20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 TTBK2Q6IQ55 1244 aa20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 BTNL9Q6UXG8 535 aa20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 ZNF333Q96JL9 665 aa20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 MTA3Q9BTC8 594 aa20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 RAVER2Q9HCJ3 691 aaKnown RBP20.42■□□□□ 0.86
SMARCAL1-209ENST00000444508 EPB41L2O43491 1005 aaKnown RBP20.41■□□□□ 0.86
SMARCAL1-209ENST00000444508 PARP1P09874 1014 aaKnown RBP20.41■□□□□ 0.86
SMARCAL1-209ENST00000444508 FCER1AP12319 257 aa20.41■□□□□ 0.86
SMARCAL1-209ENST00000444508 XRCC5P13010 732 aaKnown RBP20.41■□□□□ 0.86
SMARCAL1-209ENST00000444508 ELNP15502 786 aa20.41■□□□□ 0.86
SMARCAL1-209ENST00000444508 TSGA10IPQ3SY00 556 aa20.41■□□□□ 0.86
SMARCAL1-209ENST00000444508 ASPRV1Q53RT3 343 aa20.41■□□□□ 0.86
SMARCAL1-209ENST00000444508 TRMT44Q8IYL2 757 aaKnown RBP20.41■□□□□ 0.86
SMARCAL1-209ENST00000444508 ABRAQ8N0Z2 381 aa20.41■□□□□ 0.86
SMARCAL1-209ENST00000444508 USP6NLQ92738 828 aa20.41■□□□□ 0.86
SMARCAL1-209ENST00000444508 NEK1Q96PY6 1258 aa20.41■□□□□ 0.86
SMARCAL1-209ENST00000444508 APBA2Q99767 749 aa20.41■□□□□ 0.86
SMARCAL1-209ENST00000444508 GOLGA8HP0CJ92 632 aa20.4■□□□□ 0.86
SMARCAL1-209ENST00000444508 HSPA4P34932 840 aa20.4■□□□□ 0.86
SMARCAL1-209ENST00000444508 KCTD2Q14681 263 aa20.4■□□□□ 0.86
SMARCAL1-209ENST00000444508 CCDC174Q6PII3 467 aa20.4■□□□□ 0.86
SMARCAL1-209ENST00000444508 RASEFQ8IZ41 740 aa20.4■□□□□ 0.86
SMARCAL1-209ENST00000444508 TMEM87BQ96K49 555 aa20.4■□□□□ 0.86
SMARCAL1-209ENST00000444508 MMP19Q99542 508 aa20.4■□□□□ 0.86
SMARCAL1-209ENST00000444508 SLC5A4Q9NY91 659 aa20.4■□□□□ 0.86
SMARCAL1-209ENST00000444508 ZNF236Q9UL36 1845 aa20.39■□□□□ 0.86
SMARCAL1-209ENST00000444508 ADORA2AP29274 412 aa20.39■□□□□ 0.85
SMARCAL1-209ENST00000444508 CATIPQ7Z7H3 387 aa20.39■□□□□ 0.85
SMARCAL1-209ENST00000444508 DPP9Q86TI2 863 aa20.39■□□□□ 0.85
SMARCAL1-209ENST00000444508 TMTC2Q8N394 836 aa20.39■□□□□ 0.85
SMARCAL1-209ENST00000444508 IGDCC4Q8TDY8 1250 aa20.39■□□□□ 0.85
SMARCAL1-209ENST00000444508 FBXO40Q9UH90 709 aa20.39■□□□□ 0.85
SMARCAL1-209ENST00000444508 EIF5BO60841 1220 aaKnown RBP20.38■□□□□ 0.85
SMARCAL1-209ENST00000444508 MYCP01106 439 aaPredicted RBP20.38■□□□□ 0.85
SMARCAL1-209ENST00000444508 HMGCRP04035 888 aa20.38■□□□□ 0.85
SMARCAL1-209ENST00000444508 INHAP05111 366 aa20.38■□□□□ 0.85
SMARCAL1-209ENST00000444508 HMGB1P09429 215 aaKnown RBP20.38■□□□□ 0.85
SMARCAL1-209ENST00000444508 SNAP25P60880 206 aa20.38■□□□□ 0.85
SMARCAL1-209ENST00000444508 NFXL1Q6ZNB6 911 aa20.38■□□□□ 0.85
SMARCAL1-209ENST00000444508 KCNB2Q92953 911 aa20.38■□□□□ 0.85
SMARCAL1-209ENST00000444508 TMEM106CQ9BVX2 250 aa20.38■□□□□ 0.85
SMARCAL1-209ENST00000444508 RANBP17Q9H2T7 1088 aaKnown RBP20.38■□□□□ 0.85
SMARCAL1-209ENST00000444508 LY9Q9HBG7 655 aa20.38■□□□□ 0.85
SMARCAL1-209ENST00000444508 RIPK3Q9Y572 518 aa20.38■□□□□ 0.85
SMARCAL1-209ENST00000444508 WDR19Q8NEZ3 1342 aa20.37■□□□□ 0.85
SMARCAL1-209ENST00000444508 CCDC69A6NI79 296 aa20.37■□□□□ 0.85
SMARCAL1-209ENST00000444508 SH2B2O14492 632 aaPredicted RBP20.37■□□□□ 0.85
SMARCAL1-209ENST00000444508 HOXC6P09630 235 aa20.37■□□□□ 0.85
SMARCAL1-209ENST00000444508 SOX10P56693 466 aa20.37■□□□□ 0.85
SMARCAL1-209ENST00000444508 TKFCQ3LXA3 575 aa20.37■□□□□ 0.85
SMARCAL1-209ENST00000444508 CHST13Q8NET6 341 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms