RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 DIAPH3Q9NSV4 1193 aa21.55■■□□□ 1.04
VCX3B-203ENST00000444481 DIS3Q9Y2L1 958 aaKnown RBP21.55■■□□□ 1.04
VCX3B-203ENST00000444481 EVI5O60447 810 aa21.54■■□□□ 1.04
VCX3B-203ENST00000444481 MNX1P50219 401 aaPredicted RBP21.54■■□□□ 1.04
VCX3B-203ENST00000444481 OAZ1P54368 228 aa21.54■■□□□ 1.04
VCX3B-203ENST00000444481 DIS3LQ8TF46 1054 aaKnown RBP21.54■■□□□ 1.04
VCX3B-203ENST00000444481 CHURC1Q8WUH1 139 aa21.54■■□□□ 1.04
VCX3B-203ENST00000444481 KIFC2Q96AC6 838 aa21.54■■□□□ 1.04
VCX3B-203ENST00000444481 MAML3Q96JK9 1138 aa21.54■■□□□ 1.04
VCX3B-203ENST00000444481 SLC38A10Q9HBR0 1119 aa21.54■■□□□ 1.04
VCX3B-203ENST00000444481 TOMM22Q9NS69 142 aa21.54■■□□□ 1.04
VCX3B-203ENST00000444481 DDX20Q9UHI6 824 aaKnown RBP21.54■■□□□ 1.04
VCX3B-203ENST00000444481 TACC3Q9Y6A5 838 aa21.54■■□□□ 1.04
VCX3B-203ENST00000444481 ZNFX1Q9P2E3 1918 aaKnown RBP21.54■■□□□ 1.04
VCX3B-203ENST00000444481 CEP290O15078 2479 aa21.53■■□□□ 1.04
VCX3B-203ENST00000444481 PLA2G6O60733 806 aa21.53■■□□□ 1.04
VCX3B-203ENST00000444481 CYBAP13498 195 aa21.53■■□□□ 1.04
VCX3B-203ENST00000444481 CNGA1P29973 690 aa21.53■■□□□ 1.04
VCX3B-203ENST00000444481 NT5C2P49902 561 aa21.53■■□□□ 1.04
VCX3B-203ENST00000444481 SNRNP48Q6IEG0 339 aaKnown RBP21.53■■□□□ 1.04
VCX3B-203ENST00000444481 CWC27Q6UX04 472 aaKnown RBP21.53■■□□□ 1.04
VCX3B-203ENST00000444481 FAM160B2Q86V87 743 aa21.53■■□□□ 1.04
VCX3B-203ENST00000444481 C11orf49Q9H6J7 331 aa21.53■■□□□ 1.04
VCX3B-203ENST00000444481 TCP11L1Q9NUJ3 509 aa21.53■■□□□ 1.04
VCX3B-203ENST00000444481 TMEM232C9JQI7 657 aa21.52■■□□□ 1.04
VCX3B-203ENST00000444481 SLC1A4P43007 532 aa21.52■■□□□ 1.04
VCX3B-203ENST00000444481 STAT2P52630 851 aa21.52■■□□□ 1.04
VCX3B-203ENST00000444481 MFSD6Q6ZSS7 791 aa21.52■■□□□ 1.04
VCX3B-203ENST00000444481 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.52■■□□□ 1.04
VCX3B-203ENST00000444481 STAG1Q8WVM7 1258 aa21.52■■□□□ 1.04
VCX3B-203ENST00000444481 RNF41Q9H4P4 317 aaPredicted RBP21.52■■□□□ 1.04
VCX3B-203ENST00000444481 NRBP1Q9UHY1 535 aa21.52■■□□□ 1.04
VCX3B-203ENST00000444481 IRX6P78412 446 aaPredicted RBP21.51■■□□□ 1.03
VCX3B-203ENST00000444481 ZNF792Q3KQV3 632 aa21.51■■□□□ 1.03
VCX3B-203ENST00000444481 AKNAD1Q5T1N1 836 aa21.51■■□□□ 1.03
VCX3B-203ENST00000444481 RCSD1Q6JBY9 416 aa21.51■■□□□ 1.03
VCX3B-203ENST00000444481 CPXCR1Q8N123 301 aa21.51■■□□□ 1.03
VCX3B-203ENST00000444481 FBXO40Q9UH90 709 aa21.51■■□□□ 1.03
VCX3B-203ENST00000444481 ZNF213O14771 459 aa21.5■■□□□ 1.03
VCX3B-203ENST00000444481 NMT2O60551 498 aa21.5■■□□□ 1.03
VCX3B-203ENST00000444481 SLC34A2O95436 690 aa21.5■■□□□ 1.03
VCX3B-203ENST00000444481 COL6A1P12109 1028 aa21.5■■□□□ 1.03
VCX3B-203ENST00000444481 MCCP23508 829 aa21.5■■□□□ 1.03
VCX3B-203ENST00000444481 PDE4AP27815 886 aa21.5■■□□□ 1.03
VCX3B-203ENST00000444481 HAND2P61296 217 aa21.5■■□□□ 1.03
VCX3B-203ENST00000444481 RRP12Q5JTH9 1297 aaKnown RBP21.5■■□□□ 1.03
VCX3B-203ENST00000444481 HABP4Q5JVS0 413 aaKnown RBP21.5■■□□□ 1.03
VCX3B-203ENST00000444481 MSL3Q8N5Y2 521 aaKnown RBP21.5■■□□□ 1.03
VCX3B-203ENST00000444481 TRPV1Q8NER1 839 aa21.5■■□□□ 1.03
VCX3B-203ENST00000444481 CHST13Q8NET6 341 aa21.5■■□□□ 1.03
VCX3B-203ENST00000444481 TTC14Q96N46 770 aa21.5■■□□□ 1.03
VCX3B-203ENST00000444481 RIPK3Q9Y572 518 aa21.5■■□□□ 1.03
VCX3B-203ENST00000444481 SEPT4O43236 478 aa21.49■■□□□ 1.03
VCX3B-203ENST00000444481 PGK2P07205 417 aa21.49■■□□□ 1.03
VCX3B-203ENST00000444481 TOP1P11387 765 aaKnown RBP21.49■■□□□ 1.03
VCX3B-203ENST00000444481 DDX11Q96FC9 970 aa21.49■■□□□ 1.03
VCX3B-203ENST00000444481 TINF2Q9BSI4 451 aa21.49■■□□□ 1.03
VCX3B-203ENST00000444481 DSCC1Q9BVC3 393 aa21.49■■□□□ 1.03
VCX3B-203ENST00000444481 RAVER2Q9HCJ3 691 aaKnown RBP21.49■■□□□ 1.03
VCX3B-203ENST00000444481 ISY1Q9ULR0 285 aaKnown RBP21.49■■□□□ 1.03
VCX3B-203ENST00000444481 IKQ13123 557 aaPredicted RBP21.48■■□□□ 1.03
VCX3B-203ENST00000444481 TTC22Q5TAA0 569 aa21.48■■□□□ 1.03
VCX3B-203ENST00000444481 ARRDC4Q8NCT1 418 aa21.48■■□□□ 1.03
VCX3B-203ENST00000444481 DCAF4Q8WV16 495 aa21.48■■□□□ 1.03
VCX3B-203ENST00000444481 COLQQ9Y215 455 aaPredicted RBP21.48■■□□□ 1.03
VCX3B-203ENST00000444481 FRMPD3Q5JV73 1810 aa21.48■■□□□ 1.03
VCX3B-203ENST00000444481 PLXNA1Q9UIW2 1896 aa21.47■■□□□ 1.03
VCX3B-203ENST00000444481 KCTD1Q719H9 257 aa21.47■■□□□ 1.03
VCX3B-203ENST00000444481 ESR2Q92731 530 aa21.47■■□□□ 1.03
VCX3B-203ENST00000444481 CTNNA3Q9UI47 895 aa21.47■■□□□ 1.03
VCX3B-203ENST00000444481 PFASO15067 1338 aa21.47■■□□□ 1.03
VCX3B-203ENST00000444481 DNAJC25-GNG10A0A024R161 153 aa21.46■■□□□ 1.03
VCX3B-203ENST00000444481 DNM1LO00429 736 aa21.46■■□□□ 1.03
VCX3B-203ENST00000444481 SLC4A3P48751 1232 aa21.46■■□□□ 1.03
VCX3B-203ENST00000444481 TKFCQ3LXA3 575 aa21.46■■□□□ 1.03
VCX3B-203ENST00000444481 CCDC178Q5BJE1 867 aa21.46■■□□□ 1.03
VCX3B-203ENST00000444481 ZNF467Q7Z7K2 595 aaPredicted RBP21.46■■□□□ 1.03
VCX3B-203ENST00000444481 TBC1D10CQ8IV04 446 aa21.46■■□□□ 1.03
VCX3B-203ENST00000444481 TMEM47Q9BQJ4 181 aa21.46■■□□□ 1.03
VCX3B-203ENST00000444481 ALPK3Q96L96 1907 aa21.45■■□□□ 1.02
VCX3B-203ENST00000444481 GSPT1P15170 499 aaKnown RBP21.45■■□□□ 1.02
VCX3B-203ENST00000444481 IMMTQ16891 758 aaKnown RBP21.45■■□□□ 1.02
VCX3B-203ENST00000444481 PRAMEF19Q5SWL8 479 aa21.45■■□□□ 1.02
VCX3B-203ENST00000444481 MAMDC4Q6UXC1 1216 aa21.45■■□□□ 1.02
VCX3B-203ENST00000444481 ANKRD35Q8N283 1001 aa21.45■■□□□ 1.02
VCX3B-203ENST00000444481 PRR12Q9ULL5 1215 aa21.45■■□□□ 1.02
VCX3B-203ENST00000444481 CCDC96Q2M329 555 aa21.44■■□□□ 1.02
VCX3B-203ENST00000444481 BTNL9Q6UXG8 535 aa21.44■■□□□ 1.02
VCX3B-203ENST00000444481 CHRDL2Q6WN34 429 aa21.44■■□□□ 1.02
VCX3B-203ENST00000444481 RUFY2Q8WXA3 655 aa21.44■■□□□ 1.02
VCX3B-203ENST00000444481 ACAD9Q9H845 621 aa21.44■■□□□ 1.02
VCX3B-203ENST00000444481 CNPY2Q9Y2B0 182 aa21.44■■□□□ 1.02
VCX3B-203ENST00000444481 ZNF536O15090 1300 aa21.44■■□□□ 1.02
VCX3B-203ENST00000444481 RAD50Q92878 1312 aa21.44■■□□□ 1.02
VCX3B-203ENST00000444481 SYNGAP1Q96PV0 1343 aa21.44■■□□□ 1.02
VCX3B-203ENST00000444481 LAMA4Q16363 1823 aa21.43■■□□□ 1.02
VCX3B-203ENST00000444481 IQCA1Q86XH1 822 aa21.43■■□□□ 1.02
VCX3B-203ENST00000444481 DGKHQ86XP1 1220 aa21.43■■□□□ 1.02
VCX3B-203ENST00000444481 C7orf61Q8IZ16 206 aa21.43■■□□□ 1.02
VCX3B-203ENST00000444481 MTMR7Q9Y216 660 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms