RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-208ENST00000444476 VGLL4Q14135 290 aa13.29□□□□□ -0.28
LINC00475-208ENST00000444476 NOL9Q5SY16 702 aaKnown RBP13.29□□□□□ -0.28
LINC00475-208ENST00000444476 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.29□□□□□ -0.28
LINC00475-208ENST00000444476 WNK4Q96J92 1243 aa13.29□□□□□ -0.28
LINC00475-208ENST00000444476 RIOK1Q9BRS2 568 aaKnown RBP13.29□□□□□ -0.28
LINC00475-208ENST00000444476 CRNKL1Q9BZJ0 848 aaKnown RBP13.29□□□□□ -0.28
LINC00475-208ENST00000444476 FLT1P17948 1338 aa13.29□□□□□ -0.28
LINC00475-208ENST00000444476 SALL3Q9BXA9 1300 aa13.29□□□□□ -0.28
LINC00475-208ENST00000444476 ZNF532Q9HCE3 1301 aa13.29□□□□□ -0.28
LINC00475-208ENST00000444476 LAMB1P07942 1786 aa13.29□□□□□ -0.28
LINC00475-208ENST00000444476 CDK5RAP2Q96SN8 1893 aa13.28□□□□□ -0.28
LINC00475-208ENST00000444476 TCRBV5S4A2TA0A5A2 114 aa13.28□□□□□ -0.28
LINC00475-208ENST00000444476 DDTLA6NHG4 134 aaPredicted RBP13.28□□□□□ -0.28
LINC00475-208ENST00000444476 IGHA1P01876 353 aa13.28□□□□□ -0.28
LINC00475-208ENST00000444476 HLA-DOAP06340 250 aa13.28□□□□□ -0.28
LINC00475-208ENST00000444476 USP5P45974 858 aa13.28□□□□□ -0.28
LINC00475-208ENST00000444476 NUCB1Q02818 461 aa13.28□□□□□ -0.28
LINC00475-208ENST00000444476 CHD1LQ86WJ1 897 aa13.28□□□□□ -0.28
LINC00475-208ENST00000444476 ERO1BQ86YB8 467 aa13.28□□□□□ -0.28
LINC00475-208ENST00000444476 PI4K2BQ8TCG2 481 aa13.28□□□□□ -0.28
LINC00475-208ENST00000444476 TGFBRAP1Q8WUH2 860 aa13.28□□□□□ -0.28
LINC00475-208ENST00000444476 CLMNQ96JQ2 1002 aa13.28□□□□□ -0.28
LINC00475-208ENST00000444476 OCSTAMPQ9BR26 566 aa13.28□□□□□ -0.28
LINC00475-208ENST00000444476 AP1G2O75843 785 aa13.27□□□□□ -0.29
LINC00475-208ENST00000444476 IGHDP01880 384 aa13.27□□□□□ -0.29
LINC00475-208ENST00000444476 TM4SF4P48230 202 aa13.27□□□□□ -0.29
LINC00475-208ENST00000444476 PDE1AP54750 535 aa13.27□□□□□ -0.29
LINC00475-208ENST00000444476 PPATQ06203 517 aa13.27□□□□□ -0.29
LINC00475-208ENST00000444476 OTUD7BQ6GQQ9 843 aa13.27□□□□□ -0.29
LINC00475-208ENST00000444476 MIGA2Q7L4E1 593 aa13.27□□□□□ -0.29
LINC00475-208ENST00000444476 FOXP4Q8IVH2 680 aaPredicted RBP13.27□□□□□ -0.29
LINC00475-208ENST00000444476 ZFPM1Q8IX07 1006 aa13.27□□□□□ -0.29
LINC00475-208ENST00000444476 MIGA1Q8NAN2 632 aa13.27□□□□□ -0.29
LINC00475-208ENST00000444476 EDC3Q96F86 508 aaKnown RBP13.27□□□□□ -0.29
LINC00475-208ENST00000444476 DDRGK1Q96HY6 314 aa13.27□□□□□ -0.29
LINC00475-208ENST00000444476 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.29
LINC00475-208ENST00000444476 TMPRSS4Q9NRS4 437 aa13.27□□□□□ -0.29
LINC00475-208ENST00000444476 FZD1Q9UP38 647 aa13.27□□□□□ -0.29
LINC00475-208ENST00000444476 CTNND1O60716 968 aaKnown RBP13.26□□□□□ -0.29
LINC00475-208ENST00000444476 IRS1P35568 1242 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 PTGIRP43119 386 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 GTF2A2P52657 109 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 DYNLL1P63167 89 aaKnown RBP13.26□□□□□ -0.29
LINC00475-208ENST00000444476 FOXK2Q01167 660 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 SRSF11Q05519 484 aaKnown RBP13.26□□□□□ -0.29
LINC00475-208ENST00000444476 PPIL2Q13356 520 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 LYSMD3Q7Z3D4 306 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 TTC6Q86TZ1 520 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 METTL16Q86W50 562 aaKnown RBP13.26□□□□□ -0.29
LINC00475-208ENST00000444476 MAPKAPK5Q8IW41 473 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 WHAMMQ8TF30 809 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 OPTNQ96CV9 577 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 TRIM34Q9BYJ4 488 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 LNPKQ9C0E8 428 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 EHD4Q9H223 541 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 ELP3Q9H9T3 547 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 PRDM10Q9NQV6 1147 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 PICK1Q9NRD5 415 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 ATP8A2Q9NTI2 1148 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 GINM1Q9NU53 330 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 SNCAIPQ9Y6H5 919 aa13.26□□□□□ -0.29
LINC00475-208ENST00000444476 PHF20L1A8MW92 1017 aa13.25□□□□□ -0.29
LINC00475-208ENST00000444476 FOXN1O15353 648 aa13.25□□□□□ -0.29
LINC00475-208ENST00000444476 RAB15P59190 212 aa13.25□□□□□ -0.29
LINC00475-208ENST00000444476 IRX6P78412 446 aaPredicted RBP13.25□□□□□ -0.29
LINC00475-208ENST00000444476 TSHZ3Q63HK5 1081 aa13.25□□□□□ -0.29
LINC00475-208ENST00000444476 AMOTL1Q8IY63 956 aa13.25□□□□□ -0.29
LINC00475-208ENST00000444476 SCYL3Q8IZE3 742 aa13.25□□□□□ -0.29
LINC00475-208ENST00000444476 OTUD7AQ8TE49 926 aaPredicted RBP13.25□□□□□ -0.29
LINC00475-208ENST00000444476 APPBP2Q92624 585 aa13.25□□□□□ -0.29
LINC00475-208ENST00000444476 EVI5LQ96CN4 794 aa13.25□□□□□ -0.29
LINC00475-208ENST00000444476 ZIC5Q96T25 663 aa13.25□□□□□ -0.29
LINC00475-208ENST00000444476 OSBPL3Q9H4L5 887 aa13.25□□□□□ -0.29
LINC00475-208ENST00000444476 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.25□□□□□ -0.29
LINC00475-208ENST00000444476 MYH1P12882 1939 aa13.25□□□□□ -0.29
LINC00475-208ENST00000444476 ERVH48-1M5A8F1 160 aa13.24□□□□□ -0.29
LINC00475-208ENST00000444476 RNF113AO15541 343 aaKnown RBP13.24□□□□□ -0.29
LINC00475-208ENST00000444476 INPP5BP32019 993 aa13.24□□□□□ -0.29
LINC00475-208ENST00000444476 SNAPC2Q13487 334 aa13.24□□□□□ -0.29
LINC00475-208ENST00000444476 COL13A1Q5TAT6 717 aaPredicted RBP13.24□□□□□ -0.29
LINC00475-208ENST00000444476 B4GALNT3Q6L9W6 998 aa13.24□□□□□ -0.29
LINC00475-208ENST00000444476 CRACR2BQ8N4Y2 399 aaPredicted RBP13.24□□□□□ -0.29
LINC00475-208ENST00000444476 ZKSCAN4Q969J2 545 aaPredicted RBP13.24□□□□□ -0.29
LINC00475-208ENST00000444476 FSD1Q9BTV5 496 aa13.24□□□□□ -0.29
LINC00475-208ENST00000444476 CFHR5Q9BXR6 569 aa13.24□□□□□ -0.29
LINC00475-208ENST00000444476 ZCCHC17Q9NP64 241 aaKnown RBP13.24□□□□□ -0.29
LINC00475-208ENST00000444476 ENAMQ9NRM1 1142 aa13.24□□□□□ -0.29
LINC00475-208ENST00000444476 SERPINB13Q9UIV8 391 aa13.24□□□□□ -0.29
LINC00475-208ENST00000444476 DOCK1Q14185 1865 aa13.23□□□□□ -0.29
LINC00475-208ENST00000444476 NAV1Q8NEY1 1877 aa13.23□□□□□ -0.29
LINC00475-208ENST00000444476 MBD4O95243 580 aa13.23□□□□□ -0.29
LINC00475-208ENST00000444476 CENPBP07199 599 aaPredicted RBP13.23□□□□□ -0.29
LINC00475-208ENST00000444476 HSPA8P11142 646 aaKnown RBP13.23□□□□□ -0.29
LINC00475-208ENST00000444476 CETPP11597 493 aa13.23□□□□□ -0.29
LINC00475-208ENST00000444476 GNAT2P19087 354 aa13.23□□□□□ -0.29
LINC00475-208ENST00000444476 NOM1Q5C9Z4 860 aaKnown RBP13.23□□□□□ -0.29
LINC00475-208ENST00000444476 FOXD4L5Q5VV16 416 aaPredicted RBP13.23□□□□□ -0.29
LINC00475-208ENST00000444476 GIMAP6Q6P9H5 292 aa13.23□□□□□ -0.29
LINC00475-208ENST00000444476 LCORLQ8N3X6 602 aa13.23□□□□□ -0.29
LINC00475-208ENST00000444476 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms