RNA–Protein interactions for RNA: ENST00000443353.5

PDK1-208, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

TSL 2

Gene PDK1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-208ENST00000443353 KCTD2Q14681 263 aa12.4□□□□□ -0.42
PDK1-208ENST00000443353 SNRNP48Q6IEG0 339 aaKnown RBP12.4□□□□□ -0.42
PDK1-208ENST00000443353 LRRC47Q8N1G4 583 aaKnown RBP12.4□□□□□ -0.42
PDK1-208ENST00000443353 MKL1Q969V6 931 aa12.4□□□□□ -0.42
PDK1-208ENST00000443353 GUCD1Q96NT3 240 aa12.4□□□□□ -0.42
PDK1-208ENST00000443353 RAVER2Q9HCJ3 691 aaKnown RBP12.4□□□□□ -0.42
PDK1-208ENST00000443353 PRDM5Q9NQX1 630 aaPredicted RBP12.4□□□□□ -0.42
PDK1-208ENST00000443353 MTMR4Q9NYA4 1195 aa12.4□□□□□ -0.42
PDK1-208ENST00000443353 PHF24Q9UPV7 400 aa12.4□□□□□ -0.42
PDK1-208ENST00000443353 DIS3Q9Y2L1 958 aaKnown RBP12.4□□□□□ -0.42
PDK1-208ENST00000443353 MYADML2A6NDP7 307 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 SLC4A3P48751 1232 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 TDO2P48775 406 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 EPHB4P54760 987 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 TLE2Q04725 743 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 C1orf53Q5VUE5 145 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 CCDC129Q6ZRS4 1044 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 RASGRP2Q7LDG7 609 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 CPXCR1Q8N123 301 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 KIFC2Q96AC6 838 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 CHMP4CQ96CF2 233 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 FAM161BQ96MY7 647 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 LBHD1Q9BQE6 289 aaPredicted RBP12.39□□□□□ -0.43
PDK1-208ENST00000443353 TEX13BQ9BXU2 312 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 STXBP5LQ9Y2K9 1186 aa12.39□□□□□ -0.43
PDK1-208ENST00000443353 SALL3Q9BXA9 1300 aa12.38□□□□□ -0.43
PDK1-208ENST00000443353 DLL1O00548 723 aa12.38□□□□□ -0.43
PDK1-208ENST00000443353 ATP2A1O14983 1001 aa12.38□□□□□ -0.43
PDK1-208ENST00000443353 APPP05067 770 aa12.38□□□□□ -0.43
PDK1-208ENST00000443353 ZFYP08048 801 aaPredicted RBP12.38□□□□□ -0.43
PDK1-208ENST00000443353 RARBP10826 455 aa12.38□□□□□ -0.43
PDK1-208ENST00000443353 ZMYM1Q5SVZ6 1142 aa12.38□□□□□ -0.43
PDK1-208ENST00000443353 CCSAPQ6IQ19 270 aaPredicted RBP12.38□□□□□ -0.43
PDK1-208ENST00000443353 PRPF38AQ8NAV1 312 aaKnown RBP12.38□□□□□ -0.43
PDK1-208ENST00000443353 SLC38A10Q9HBR0 1119 aa12.38□□□□□ -0.43
PDK1-208ENST00000443353 NRBP1Q9UHY1 535 aa12.38□□□□□ -0.43
PDK1-208ENST00000443353 SYNRGQ9UMZ2 1314 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 LTBP2Q14767 1821 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 A0A1W2PQ45 241 aaPredicted RBP12.37□□□□□ -0.43
PDK1-208ENST00000443353 A0A1W2PQY0 241 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 GNAT2P19087 354 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 PTGS1P23219 599 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 VPS53Q5VIR6 699 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 MAMDC4Q6UXC1 1216 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 ZNF444Q8N0Y2 327 aaPredicted RBP12.37□□□□□ -0.43
PDK1-208ENST00000443353 KLHDC9Q8NEP7 349 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 NEDD1Q8NHV4 660 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 GPATCH3Q96I76 525 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 PRKAG2Q9UGJ0 569 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 DDX49Q9Y6V7 483 aaKnown RBP12.37□□□□□ -0.43
PDK1-208ENST00000443353 VCANP13611 3396 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
PDK1-208ENST00000443353 ZNF536O15090 1300 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 TTC41PQ6P2S7 1318 aa12.37□□□□□ -0.43
PDK1-208ENST00000443353 PLIN4Q96Q06 1357 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 NMT2O60551 498 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 TTLL1O95922 423 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 AKR1A1P14550 325 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 SNAP25P60880 206 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 TFAP4Q01664 338 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 PPARAQ07869 468 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 SLFN13Q68D06 897 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 FAM109BQ6ICB4 259 aaPredicted RBP12.36□□□□□ -0.43
PDK1-208ENST00000443353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.36□□□□□ -0.43
PDK1-208ENST00000443353 GMCL1P1Q8NEA9 526 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 DDX11Q96FC9 970 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 FSD1Q9BTV5 496 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 KATNBL1Q9H079 304 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 IL17RBQ9NRM6 502 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.36□□□□□ -0.43
PDK1-208ENST00000443353 ASTN1O14525 1302 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 SYNGAP1Q96PV0 1343 aa12.36□□□□□ -0.43
PDK1-208ENST00000443353 CTAGE5O15320 804 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 PQBP1O60828 265 aaKnown RBP12.35□□□□□ -0.43
PDK1-208ENST00000443353 ZBED4O75132 1171 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 BMP3P12645 472 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 COPB2P35606 906 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 ACLYP53396 1101 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 CNTN2Q02246 1040 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 CTDSPL2Q05D32 466 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 FAAP100Q0VG06 881 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 ACVR2BQ13705 512 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 KCNA10Q16322 511 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 RNF180Q86T96 592 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 AGBL1Q96MI9 1066 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 TTYH1Q9H313 450 aaPredicted RBP12.35□□□□□ -0.43
PDK1-208ENST00000443353 HOMER2Q9NSB8 354 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.35□□□□□ -0.43
PDK1-208ENST00000443353 FEM1BQ9UK73 627 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 ZHX1Q9UKY1 873 aaPredicted RBP12.35□□□□□ -0.43
PDK1-208ENST00000443353 CNPY2Q9Y2B0 182 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 SPTBN5Q9NRC6 3674 aaKnown RBP12.35□□□□□ -0.43
PDK1-208ENST00000443353 MYH7P12883 1935 aa12.35□□□□□ -0.43
PDK1-208ENST00000443353 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.34□□□□□ -0.43
PDK1-208ENST00000443353 SOWAHBA6NEL2 793 aa12.34□□□□□ -0.43
PDK1-208ENST00000443353 TMEM232C9JQI7 657 aa12.34□□□□□ -0.43
PDK1-208ENST00000443353 KIAA0355O15063 1070 aa12.34□□□□□ -0.43
PDK1-208ENST00000443353 CLTBP09497 229 aa12.34□□□□□ -0.43
PDK1-208ENST00000443353 TSPY3P0CV98 308 aa12.34□□□□□ -0.43
PDK1-208ENST00000443353 TSPY8P0CW00 308 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms