RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PORCNQ9H237 461 aa18.76■□□□□ 0.59
USP39-205ENST00000442708 ZSWIM6Q9HCJ5 1215 aa18.76■□□□□ 0.59
USP39-205ENST00000442708 PRR12Q9ULL5 1215 aa18.76■□□□□ 0.59
USP39-205ENST00000442708 SMCHD1A6NHR9 2005 aa18.76■□□□□ 0.59
USP39-205ENST00000442708 HMGB1P09429 215 aaKnown RBP18.75■□□□□ 0.59
USP39-205ENST00000442708 LIFRP42702 1097 aa18.75■□□□□ 0.59
USP39-205ENST00000442708 PSMC4P43686 418 aa18.75■□□□□ 0.59
USP39-205ENST00000442708 FAM160B2Q86V87 743 aa18.75■□□□□ 0.59
USP39-205ENST00000442708 CHURC1Q8WUH1 139 aa18.75■□□□□ 0.59
USP39-205ENST00000442708 IL17RAQ96F46 866 aa18.75■□□□□ 0.59
USP39-205ENST00000442708 UPF3BQ9BZI7 483 aaKnown RBP18.75■□□□□ 0.59
USP39-205ENST00000442708 UBA5Q9GZZ9 404 aa18.75■□□□□ 0.59
USP39-205ENST00000442708 MAD2L2Q9UI95 211 aa18.75■□□□□ 0.59
USP39-205ENST00000442708 ZNF214Q9UL59 606 aaPredicted RBP18.75■□□□□ 0.59
USP39-205ENST00000442708 BRPF3Q9ULD4 1205 aa18.75■□□□□ 0.59
USP39-205ENST00000442708 IKQ13123 557 aaPredicted RBP18.74■□□□□ 0.59
USP39-205ENST00000442708 GRM4Q14833 912 aa18.74■□□□□ 0.59
USP39-205ENST00000442708 SLC35G1Q2M3R5 365 aa18.74■□□□□ 0.59
USP39-205ENST00000442708 RUFY3Q7L099 469 aa18.74■□□□□ 0.59
USP39-205ENST00000442708 OTOP1Q7RTM1 612 aa18.74■□□□□ 0.59
USP39-205ENST00000442708 RAB11FIP4Q86YS3 637 aa18.74■□□□□ 0.59
USP39-205ENST00000442708 ZNF654Q8IZM8 581 aa18.74■□□□□ 0.59
USP39-205ENST00000442708 MB21D1Q8N884 522 aa18.74■□□□□ 0.59
USP39-205ENST00000442708 MOV10L1Q9BXT6 1211 aaKnown RBP18.74■□□□□ 0.59
USP39-205ENST00000442708 TM6SF1Q9BZW5 370 aa18.74■□□□□ 0.59
USP39-205ENST00000442708 SPATC1LQ9H0A9 340 aa18.74■□□□□ 0.59
USP39-205ENST00000442708 EFCC1Q9HA90 598 aa18.74■□□□□ 0.59
USP39-205ENST00000442708 SLC38A10Q9HBR0 1119 aa18.74■□□□□ 0.59
USP39-205ENST00000442708 PALM3A6NDB9 673 aaPredicted RBP18.73■□□□□ 0.59
USP39-205ENST00000442708 PSMA5P28066 241 aa18.73■□□□□ 0.59
USP39-205ENST00000442708 GPATCH4Q5T3I0 446 aaKnown RBP18.73■□□□□ 0.59
USP39-205ENST00000442708 SYDE2Q5VT97 1194 aa18.73■□□□□ 0.59
USP39-205ENST00000442708 NFXL1Q6ZNB6 911 aa18.73■□□□□ 0.59
USP39-205ENST00000442708 Q6ZUG5 572 aa18.73■□□□□ 0.59
USP39-205ENST00000442708 CATIPQ7Z7H3 387 aa18.73■□□□□ 0.59
USP39-205ENST00000442708 SGMS1Q86VZ5 419 aa18.73■□□□□ 0.59
USP39-205ENST00000442708 ZNF536O15090 1300 aa18.73■□□□□ 0.59
USP39-205ENST00000442708 CCDC69A6NI79 296 aa18.72■□□□□ 0.59
USP39-205ENST00000442708 EIF5BO60841 1220 aaKnown RBP18.72■□□□□ 0.59
USP39-205ENST00000442708 FMNL1O95466 1100 aaPredicted RBP18.72■□□□□ 0.59
USP39-205ENST00000442708 PARP1P09874 1014 aaKnown RBP18.72■□□□□ 0.59
USP39-205ENST00000442708 RXRAP19793 462 aa18.72■□□□□ 0.59
USP39-205ENST00000442708 ANAPC15P60006 121 aa18.72■□□□□ 0.59
USP39-205ENST00000442708 PLS1Q14651 629 aa18.72■□□□□ 0.59
USP39-205ENST00000442708 KIF22Q14807 665 aa18.72■□□□□ 0.59
USP39-205ENST00000442708 ASPRV1Q53RT3 343 aa18.72■□□□□ 0.59
USP39-205ENST00000442708 CTU1Q7Z7A3 348 aaKnown RBP18.72■□□□□ 0.59
USP39-205ENST00000442708 TMTC2Q8N394 836 aa18.72■□□□□ 0.59
USP39-205ENST00000442708 RAVER2Q9HCJ3 691 aaKnown RBP18.72■□□□□ 0.59
USP39-205ENST00000442708 RIPK3Q9Y572 518 aa18.72■□□□□ 0.59
USP39-205ENST00000442708 TRIM17Q9Y577 477 aa18.72■□□□□ 0.59
USP39-205ENST00000442708 BAZ2BQ9UIF8 2168 aaKnown RBP18.71■□□□□ 0.59
USP39-205ENST00000442708 HTTP42858 3142 aa18.71■□□□□ 0.59
USP39-205ENST00000442708 ZBED4O75132 1171 aa18.71■□□□□ 0.59
USP39-205ENST00000442708 DDAH1O94760 285 aa18.71■□□□□ 0.59
USP39-205ENST00000442708 TAL1P17542 331 aaPredicted RBP18.71■□□□□ 0.59
USP39-205ENST00000442708 FCGRTP55899 365 aa18.71■□□□□ 0.59
USP39-205ENST00000442708 APOBRQ0VD83 1088 aa18.71■□□□□ 0.59
USP39-205ENST00000442708 TOB2Q14106 344 aaPredicted RBP18.71■□□□□ 0.59
USP39-205ENST00000442708 APOA5Q6Q788 366 aa18.71■□□□□ 0.59
USP39-205ENST00000442708 NBPF11Q86T75 865 aa18.71■□□□□ 0.59
USP39-205ENST00000442708 CPXCR1Q8N123 301 aa18.71■□□□□ 0.59
USP39-205ENST00000442708 NUP133Q8WUM0 1156 aa18.71■□□□□ 0.59
USP39-205ENST00000442708 BRF1Q92994 677 aa18.71■□□□□ 0.59
USP39-205ENST00000442708 AGXT2Q9BYV1 514 aa18.71■□□□□ 0.59
USP39-205ENST00000442708 GABRQQ9UN88 632 aa18.71■□□□□ 0.59
USP39-205ENST00000442708 CYP46A1Q9Y6A2 500 aa18.71■□□□□ 0.59
USP39-205ENST00000442708 KLRF2D3W0D1 207 aa18.7■□□□□ 0.58
USP39-205ENST00000442708 ERCC3P19447 782 aa18.7■□□□□ 0.58
USP39-205ENST00000442708 STAT3P40763 770 aa18.7■□□□□ 0.58
USP39-205ENST00000442708 CCDC174Q6PII3 467 aa18.7■□□□□ 0.58
USP39-205ENST00000442708 CCDC144CPQ8IYA2 1237 aa18.7■□□□□ 0.58
USP39-205ENST00000442708 ADGRF4Q8IZF3 695 aa18.7■□□□□ 0.58
USP39-205ENST00000442708 FBXL16Q8N461 479 aa18.7■□□□□ 0.58
USP39-205ENST00000442708 AGBL1Q96MI9 1066 aa18.7■□□□□ 0.58
USP39-205ENST00000442708 KIF2CQ99661 725 aa18.7■□□□□ 0.58
USP39-205ENST00000442708 BACH2Q9BYV9 841 aa18.7■□□□□ 0.58
USP39-205ENST00000442708 RANBP17Q9H2T7 1088 aaKnown RBP18.7■□□□□ 0.58
USP39-205ENST00000442708 MYH6P13533 1939 aa18.7■□□□□ 0.58
USP39-205ENST00000442708 ZNFX1Q9P2E3 1918 aaKnown RBP18.7■□□□□ 0.58
USP39-205ENST00000442708 KLF18A0A0U1RQI7 1052 aa18.69■□□□□ 0.58
USP39-205ENST00000442708 TNPO2O14787 897 aaKnown RBP18.69■□□□□ 0.58
USP39-205ENST00000442708 ATP2A1O14983 1001 aa18.69■□□□□ 0.58
USP39-205ENST00000442708 MAPK4P31152 587 aa18.69■□□□□ 0.58
USP39-205ENST00000442708 CCNA1P78396 465 aa18.69■□□□□ 0.58
USP39-205ENST00000442708 SNRNP48Q6IEG0 339 aaKnown RBP18.69■□□□□ 0.58
USP39-205ENST00000442708 GPR142Q7Z601 462 aa18.69■□□□□ 0.58
USP39-205ENST00000442708 RIOX2Q8IUF8 465 aa18.69■□□□□ 0.58
USP39-205ENST00000442708 MAP3K14Q99558 947 aa18.69■□□□□ 0.58
USP39-205ENST00000442708 LARP6Q9BRS8 491 aaKnown RBP18.69■□□□□ 0.58
USP39-205ENST00000442708 C22orf23Q9BZE7 217 aa18.69■□□□□ 0.58
USP39-205ENST00000442708 GJD2Q9UKL4 321 aa18.69■□□□□ 0.58
USP39-205ENST00000442708 SLC12A7Q9Y666 1083 aa18.69■□□□□ 0.58
USP39-205ENST00000442708 CYTH3O43739 400 aa18.68■□□□□ 0.58
USP39-205ENST00000442708 FDX1P10109 184 aa18.68■□□□□ 0.58
USP39-205ENST00000442708 SLC4A3P48751 1232 aa18.68■□□□□ 0.58
USP39-205ENST00000442708 RBM25P49756 843 aaKnown RBP18.68■□□□□ 0.58
USP39-205ENST00000442708 PRKCZQ05513 592 aa18.68■□□□□ 0.58
USP39-205ENST00000442708 PLEKHH3Q7Z736 793 aa18.68■□□□□ 0.58
USP39-205ENST00000442708 MICU3Q86XE3 530 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms