RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 APOBEC3FQ8IUX4 373 aaKnown RBP19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 ENGASEQ8NFI3 743 aa19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 DEFB129Q9H1M3 183 aa19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 VAT1LQ9HCJ6 419 aa19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 DACT1Q9NYF0 836 aa19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 A0A1W2PRG0 241 aa19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 SYCE3A1L190 88 aa19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 CMA1P23946 247 aa19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 GNA11P29992 359 aa19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 CCDC96Q2M329 555 aa19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 EARS2Q5JPH6 523 aaKnown RBP19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 L1TD1Q5T7N2 865 aaKnown RBP19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 TTBK2Q6IQ55 1244 aa19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 BTNL9Q6UXG8 535 aa19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 HOOK2Q96ED9 719 aa19.51■□□□□ 0.71
TMEM39B-203ENST00000441402 TRIM75PA6NK02 468 aa19.5■□□□□ 0.71
TMEM39B-203ENST00000441402 CUTAO60888 179 aa19.5■□□□□ 0.71
TMEM39B-203ENST00000441402 NR1I2O75469 434 aa19.5■□□□□ 0.71
TMEM39B-203ENST00000441402 NDUFB10O96000 172 aa19.5■□□□□ 0.71
TMEM39B-203ENST00000441402 PPP1R18Q6NYC8 613 aa19.5■□□□□ 0.71
TMEM39B-203ENST00000441402 KCTD1Q719H9 257 aa19.5■□□□□ 0.71
TMEM39B-203ENST00000441402 HOMER1Q86YM7 354 aa19.5■□□□□ 0.71
TMEM39B-203ENST00000441402 MRPS27Q92552 414 aaKnown RBP19.5■□□□□ 0.71
TMEM39B-203ENST00000441402 C6orf50Q9HD87 102 aa19.5■□□□□ 0.71
TMEM39B-203ENST00000441402 PCDHB6Q9Y5E3 794 aa19.5■□□□□ 0.71
TMEM39B-203ENST00000441402 PPP2R3BQ9Y5P8 575 aa19.5■□□□□ 0.71
TMEM39B-203ENST00000441402 FAM237AA0A1B0GTK4 181 aa19.49■□□□□ 0.71
TMEM39B-203ENST00000441402 ZBTB5O15062 677 aa19.49■□□□□ 0.71
TMEM39B-203ENST00000441402 PTPREP23469 700 aa19.49■□□□□ 0.71
TMEM39B-203ENST00000441402 MRE11P49959 708 aa19.49■□□□□ 0.71
TMEM39B-203ENST00000441402 NAPAP54920 295 aa19.49■□□□□ 0.71
TMEM39B-203ENST00000441402 FAM160A1Q05DH4 1040 aa19.49■□□□□ 0.71
TMEM39B-203ENST00000441402 SNW1Q13573 536 aaKnown RBP19.49■□□□□ 0.71
TMEM39B-203ENST00000441402 CCDC73Q6ZRK6 1079 aa19.49■□□□□ 0.71
TMEM39B-203ENST00000441402 RBM43Q6ZSC3 357 aaKnown RBP19.49■□□□□ 0.71
TMEM39B-203ENST00000441402 NUP62CLQ9H1M0 184 aa19.49■□□□□ 0.71
TMEM39B-203ENST00000441402 SH2D4AQ9H788 454 aa19.49■□□□□ 0.71
TMEM39B-203ENST00000441402 RNF181Q9P0P0 153 aa19.49■□□□□ 0.71
TMEM39B-203ENST00000441402 ASTN2O75129 1339 aaPredicted RBP19.49■□□□□ 0.71
TMEM39B-203ENST00000441402 SMCO2A6NFE2 343 aa19.48■□□□□ 0.71
TMEM39B-203ENST00000441402 CTNND1O60716 968 aaKnown RBP19.48■□□□□ 0.71
TMEM39B-203ENST00000441402 BMP3P12645 472 aa19.48■□□□□ 0.71
TMEM39B-203ENST00000441402 TPRNQ4KMQ1 711 aa19.48■□□□□ 0.71
TMEM39B-203ENST00000441402 FSIP1Q8NA03 581 aa19.48■□□□□ 0.71
TMEM39B-203ENST00000441402 TRPM4Q8TD43 1214 aa19.48■□□□□ 0.71
TMEM39B-203ENST00000441402 GOLPH3LQ9H4A5 285 aa19.48■□□□□ 0.71
TMEM39B-203ENST00000441402 CLSTN2Q9H4D0 955 aa19.48■□□□□ 0.71
TMEM39B-203ENST00000441402 GOPCQ9HD26 462 aa19.48■□□□□ 0.71
TMEM39B-203ENST00000441402 PCDHA6Q9UN73 950 aa19.48■□□□□ 0.71
TMEM39B-203ENST00000441402 PCDHA8Q9Y5H6 950 aa19.48■□□□□ 0.71
TMEM39B-203ENST00000441402 PITPNM2Q9BZ72 1349 aa19.48■□□□□ 0.71
TMEM39B-203ENST00000441402 FAM205CA6NFA0 338 aa19.47■□□□□ 0.71
TMEM39B-203ENST00000441402 MARCKSP29966 332 aaPredicted RBP19.47■□□□□ 0.71
TMEM39B-203ENST00000441402 EPS15P42566 896 aa19.47■□□□□ 0.71
TMEM39B-203ENST00000441402 DCAF15Q66K64 600 aa19.47■□□□□ 0.71
TMEM39B-203ENST00000441402 FMR1NBQ8N0W7 255 aaPredicted RBP19.47■□□□□ 0.71
TMEM39B-203ENST00000441402 KRI1Q8N9T8 703 aaKnown RBP19.47■□□□□ 0.71
TMEM39B-203ENST00000441402 ZNF579Q8NAF0 562 aaKnown RBP19.47■□□□□ 0.71
TMEM39B-203ENST00000441402 ZNF112Q9UJU3 913 aa19.47■□□□□ 0.71
TMEM39B-203ENST00000441402 SRPRBQ9Y5M8 271 aaKnown RBP19.47■□□□□ 0.71
TMEM39B-203ENST00000441402 ADAMTS3O15072 1205 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 CTAGE5O15320 804 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 PLA2G6O60733 806 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 SLC16A2P36021 539 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 HIRAP54198 1017 aaPredicted RBP19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 TTC38Q5R3I4 469 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 ANGEL2Q5VTE6 544 aaKnown RBP19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 PIK3AP1Q6ZUJ8 805 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 ACER1Q8TDN7 264 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 VCPKMTQ9H867 229 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 FBXO2Q9UK22 296 aaPredicted RBP19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 USP17L10C9JJH3 530 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 DDNO94850 711 aaPredicted RBP19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 ECE1P42892 770 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 NOM1Q5C9Z4 860 aaKnown RBP19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 NBPF12Q5TAG4 269 aaPredicted RBP19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 C9orf131Q5VYM1 1079 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 KRT25Q7Z3Z0 450 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 TNMDQ9H2S6 317 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 GRPEL1Q9HAV7 217 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 ADARB2Q9NS39 739 aaKnown RBP19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 HPSEQ9Y251 543 aa19.46■□□□□ 0.71
TMEM39B-203ENST00000441402 CCDC194A0A1B0GVG4 234 aa19.45■□□□□ 0.7
TMEM39B-203ENST00000441402 MAP3K11Q16584 847 aa19.45■□□□□ 0.7
TMEM39B-203ENST00000441402 RESP18Q5W5W9 173 aa19.45■□□□□ 0.7
TMEM39B-203ENST00000441402 FUCA2Q9BTY2 467 aa19.45■□□□□ 0.7
TMEM39B-203ENST00000441402 ZNF341Q9BYN7 854 aa19.45■□□□□ 0.7
TMEM39B-203ENST00000441402 GLT8D2Q9H1C3 349 aa19.45■□□□□ 0.7
TMEM39B-203ENST00000441402 ATAD5Q96QE3 1844 aa19.44■□□□□ 0.7
TMEM39B-203ENST00000441402 A0A1B0GVL5 298 aa19.44■□□□□ 0.7
TMEM39B-203ENST00000441402 PPP1R11O60927 126 aaPredicted RBP19.44■□□□□ 0.7
TMEM39B-203ENST00000441402 LMOD1P29536 600 aaPredicted RBP19.44■□□□□ 0.7
TMEM39B-203ENST00000441402 SYDE2Q5VT97 1194 aa19.44■□□□□ 0.7
TMEM39B-203ENST00000441402 SHC4Q6S5L8 630 aa19.44■□□□□ 0.7
TMEM39B-203ENST00000441402 FERMT2Q96AC1 680 aa19.44■□□□□ 0.7
TMEM39B-203ENST00000441402 COA7Q96BR5 231 aa19.44■□□□□ 0.7
TMEM39B-203ENST00000441402 TIGD1Q96MW7 591 aa19.44■□□□□ 0.7
TMEM39B-203ENST00000441402 TSPY26PQ9H489 355 aa19.44■□□□□ 0.7
TMEM39B-203ENST00000441402 RIC8AQ9NPQ8 531 aa19.44■□□□□ 0.7
TMEM39B-203ENST00000441402 SCAF8Q9UPN6 1271 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms