RNA–Protein interactions for RNA: ENST00000440636.1

SP4-203, Transcript of Sp4 transcription factor, humanhuman

TSL 3

Gene SP4, Length 288 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-203ENST00000440636 FAAP100Q0VG06 881 aa15.69■□□□□ 0.1
SP4-203ENST00000440636 MSL3Q8N5Y2 521 aaKnown RBP15.69■□□□□ 0.1
SP4-203ENST00000440636 KLHDC9Q8NEP7 349 aa15.69■□□□□ 0.1
SP4-203ENST00000440636 DDRGK1Q96HY6 314 aa15.69■□□□□ 0.1
SP4-203ENST00000440636 SLF1Q9BQI6 1058 aa15.69■□□□□ 0.1
SP4-203ENST00000440636 TEX13BQ9BXU2 312 aa15.69■□□□□ 0.1
SP4-203ENST00000440636 PUS7LQ9H0K6 701 aaKnown RBP15.69■□□□□ 0.1
SP4-203ENST00000440636 TMEM39AQ9NV64 488 aa15.69■□□□□ 0.1
SP4-203ENST00000440636 SYNGAP1Q96PV0 1343 aa15.68■□□□□ 0.1
SP4-203ENST00000440636 DNAJC25-GNG10A0A024R161 153 aa15.68■□□□□ 0.1
SP4-203ENST00000440636 SNAI1O95863 264 aaPredicted RBP15.68■□□□□ 0.1
SP4-203ENST00000440636 ACLYP53396 1101 aa15.68■□□□□ 0.1
SP4-203ENST00000440636 CCSAPQ6IQ19 270 aaPredicted RBP15.68■□□□□ 0.1
SP4-203ENST00000440636 MAMDC4Q6UXC1 1216 aa15.68■□□□□ 0.1
SP4-203ENST00000440636 NUP88Q99567 741 aaPredicted RBP15.68■□□□□ 0.1
SP4-203ENST00000440636 STARD7Q9NQZ5 370 aa15.68■□□□□ 0.1
SP4-203ENST00000440636 ARPP21Q9UBL0 812 aaPredicted RBP15.68■□□□□ 0.1
SP4-203ENST00000440636 RIPK3Q9Y572 518 aa15.68■□□□□ 0.1
SP4-203ENST00000440636 MOXD2PA6NHM9 499 aa15.67■□□□□ 0.1
SP4-203ENST00000440636 MS4A1P11836 297 aa15.67■□□□□ 0.1
SP4-203ENST00000440636 RASA1P20936 1047 aa15.67■□□□□ 0.1
SP4-203ENST00000440636 SNRNP48Q6IEG0 339 aaKnown RBP15.67■□□□□ 0.1
SP4-203ENST00000440636 NUP133Q8WUM0 1156 aa15.67■□□□□ 0.1
SP4-203ENST00000440636 TBX21Q9UL17 535 aa15.67■□□□□ 0.1
SP4-203ENST00000440636 FAM184BQ9ULE4 1060 aa15.67■□□□□ 0.1
SP4-203ENST00000440636 DDX19BQ9UMR2 479 aa15.67■□□□□ 0.1
SP4-203ENST00000440636 CHD9Q3L8U1 2897 aa15.67■□□□□ 0.1
SP4-203ENST00000440636 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.66■□□□□ 0.1
SP4-203ENST00000440636 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.66■□□□□ 0.1
SP4-203ENST00000440636 MYADML2A6NDP7 307 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 DCDC2CA8MYV0 355 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 F5H6K3 240 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 ATP2A1O14983 1001 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 NDUFB10O96000 172 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 TIMP1P01033 207 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 DNAJB2P25686 324 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 KLRC3Q07444 240 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 GRIN2CQ14957 1233 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 KCNA10Q16322 511 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 SBK1Q52WX2 424 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 ZSCAN25Q6NSZ9 544 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 NYAP2Q9P242 653 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 ZHX1Q9UKY1 873 aaPredicted RBP15.66■□□□□ 0.1
SP4-203ENST00000440636 COG6Q9Y2V7 657 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 MYO9BQ13459 2157 aa15.66■□□□□ 0.1
SP4-203ENST00000440636 ADCY6O43306 1168 aa15.65■□□□□ 0.1
SP4-203ENST00000440636 DUSP11O75319 330 aaKnown RBP15.65■□□□□ 0.1
SP4-203ENST00000440636 CST5P28325 142 aaPredicted RBP15.65■□□□□ 0.1
SP4-203ENST00000440636 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.65■□□□□ 0.1
SP4-203ENST00000440636 ZNF467Q7Z7K2 595 aaPredicted RBP15.65■□□□□ 0.1
SP4-203ENST00000440636 PRPF38AQ8NAV1 312 aaKnown RBP15.65■□□□□ 0.1
SP4-203ENST00000440636 DDX11Q96FC9 970 aa15.65■□□□□ 0.1
SP4-203ENST00000440636 STRBPQ96SI9 672 aaKnown RBP15.65■□□□□ 0.1
SP4-203ENST00000440636 MCM3APO60318 1980 aa15.65■□□□□ 0.1
SP4-203ENST00000440636 ELP1O95163 1332 aa15.65■□□□□ 0.1
SP4-203ENST00000440636 GSG1L2A8MUP6 293 aa15.64■□□□□ 0.09
SP4-203ENST00000440636 CDK7P50613 346 aa15.64■□□□□ 0.09
SP4-203ENST00000440636 IRX5P78411 483 aaPredicted RBP15.64■□□□□ 0.09
SP4-203ENST00000440636 ACVR2BQ13705 512 aa15.64■□□□□ 0.09
SP4-203ENST00000440636 MFSD5Q6N075 450 aa15.64■□□□□ 0.09
SP4-203ENST00000440636 CPXCR1Q8N123 301 aa15.64■□□□□ 0.09
SP4-203ENST00000440636 USP38Q8NB14 1042 aa15.64■□□□□ 0.09
SP4-203ENST00000440636 FGD4Q96M96 766 aa15.64■□□□□ 0.09
SP4-203ENST00000440636 GLT1D1Q96MS3 346 aa15.64■□□□□ 0.09
SP4-203ENST00000440636 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.64■□□□□ 0.096e-8■■■■■ 28.6
SP4-203ENST00000440636 MROH7Q68CQ1 1323 aa15.64■□□□□ 0.09
SP4-203ENST00000440636 NCOR1O75376 2440 aa15.63■□□□□ 0.09
SP4-203ENST00000440636 IGKV6D-41A0A0C4DH26 115 aa15.63■□□□□ 0.09
SP4-203ENST00000440636 C6orf222P0C671 652 aaPredicted RBP15.63■□□□□ 0.09
SP4-203ENST00000440636 GIMAP6Q6P9H5 292 aa15.63■□□□□ 0.09
SP4-203ENST00000440636 C16orf59Q7L2K0 433 aa15.63■□□□□ 0.09
SP4-203ENST00000440636 STK11IPQ8N1F8 1099 aa15.63■□□□□ 0.09
SP4-203ENST00000440636 PCSK9Q8NBP7 692 aaKnown RBP15.63■□□□□ 0.09
SP4-203ENST00000440636 TIFAQ96CG3 184 aa15.63■□□□□ 0.09
SP4-203ENST00000440636 UPF3AQ9H1J1 476 aaKnown RBP15.63■□□□□ 0.09
SP4-203ENST00000440636 ZNF576Q9H609 170 aa15.63■□□□□ 0.09
SP4-203ENST00000440636 MKNK2Q9HBH9 465 aa15.63■□□□□ 0.09
SP4-203ENST00000440636 SLC38A10Q9HBR0 1119 aa15.63■□□□□ 0.09
SP4-203ENST00000440636 PRDM6Q9NQX0 595 aa15.63■□□□□ 0.09
SP4-203ENST00000440636 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.63■□□□□ 0.09
SP4-203ENST00000440636 CHD7Q9P2D1 2997 aa15.63■□□□□ 0.09
SP4-203ENST00000440636 MYH4Q9Y623 1939 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 MINDY4BA8MYZ0 360 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 ZBED4O75132 1171 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 ASGR1P07306 291 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 SLC4A3P48751 1232 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 GJA9P57773 515 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 CCDC144BQ3MJ40 725 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 TMEM240Q5SV17 173 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 RASIP1Q5U651 963 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 SYMPKQ92797 1274 aaKnown RBP15.62■□□□□ 0.09
SP4-203ENST00000440636 OSBP2Q969R2 916 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 MKL1Q969V6 931 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 KIFC2Q96AC6 838 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 LRRCC1Q9C099 1032 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 ABHD16BQ9H3Z7 469 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 RAVER2Q9HCJ3 691 aaKnown RBP15.62■□□□□ 0.09
SP4-203ENST00000440636 CLIP2Q9UDT6 1046 aa15.62■□□□□ 0.09
SP4-203ENST00000440636 A0A0U1RQG5 324 aaPredicted RBP15.61■□□□□ 0.09
SP4-203ENST00000440636 ARVCFO00192 962 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms